mRNA_M-pyrifera_M_contig122052.4544.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: UPI00034583A6 (heliorhodopsin HeR n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034583A6) HSP 1 Score: 224 bits (570), Expect = 2.300e-71 Identity = 106/140 (75.71%), Postives = 115/140 (82.14%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVNDPDRPTWWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLID 420
LIAL+TGITD+AALIAIAFVN +MILFGWIMEMVN P WWTPFWFG IAGI PW AI YLV+N S +GA PPTFVY I+ TIFV FN FA+NQWLQYR +G+W DYV GE VYIVLSL AKS LAWQIFANTLID
Sbjct: 132 LIALITGITDVAALIAIAFVNVSMILFGWIMEMVNVPGGERWWTPFWFGCIAGIGPWAAIVTYLVINSSIDGAATPPTFVYAIIATIFVFFNCFAINQWLQYRGIGKWKDYVFGETVYIVLSLTAKSALAWQIFANTLID 271
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: A0A520XNW7_9ACTN (Heliorhodopsin HeR n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XNW7_9ACTN) HSP 1 Score: 213 bits (541), Expect = 6.300e-67 Identity = 99/143 (69.23%), Postives = 116/143 (81.12%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVNDPD----RPTWWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLI 417
LIA TG+TDLA L+ +AF N +MILFGWIMEMVN+P TWWTPFWFG IAGI PWVAI L N+S++GAEGPP FVYGI+V+IF FN FA+NQWLQYR++G+W+DY+HGE YI+LS VAKSVLAWQIFANTLI
Sbjct: 129 LIAATTGVTDLAGLLGLAFANISMILFGWIMEMVNNPTDGSGAKTWWTPFWFGCIAGIGPWVAILVPLWFNISQDGAEGPPGFVYGIIVSIFFFFNTFAINQWLQYRQVGKWSDYLHGERTYIILSFVAKSVLAWQIFANTLI 271
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: UPI0011B52778 (heliorhodopsin HeR n=1 Tax=Nesterenkonia sp. NBAIMH1 TaxID=2600320 RepID=UPI0011B52778) HSP 1 Score: 206 bits (523), Expect = 4.150e-64 Identity = 96/151 (63.58%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVNDP-----------DRPTWWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLID 420
LI+L+ GI+D+AALI + F N AMILFGW+MEM N+ WWTPFWFG IAG APW+A AAYL++NV EG EGPP FVYGI+V++FVLFNIFA+NQWLQY++LGRW DY+ GE YIVLSLVAKS+LAWQ+FAN L+
Sbjct: 131 LISLLLGISDIAALIGVGFANVAMILFGWLMEMANNGLMHEKNGRSARGERAWWTPFWFGCIAGAAPWLAAAAYLIINVGIEGGEGPPGFVYGIIVSLFVLFNIFAVNQWLQYKQLGRWKDYLTGERTYIVLSLVAKSLLAWQVFANVLVS 281
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: UPI001B83606C (heliorhodopsin HeR n=1 Tax=Phycicoccus sp. BSK3Z-2 TaxID=2828860 RepID=UPI001B83606C) HSP 1 Score: 203 bits (516), Expect = 4.900e-63 Identity = 100/150 (66.67%), Postives = 115/150 (76.67%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVND------PDRPT-----WWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLI 417
LIALVTGITDLAAL+ + N AMILFGW+MEM N+ RP WWTPFWFG +AGI PW+AIA YL V + G EGPP FV+GI+V++FVLFN FA+NQWLQYRR+GRW DY+ GE Y+VLSLVAKSVLAWQIFANTLI
Sbjct: 131 LIALVTGITDLAALVGLGVANIAMILFGWLMEMSNNGLMHGRDARPVRGGRAWWTPFWFGCVAGIGPWLAIALYLWVTIGVNGGEGPPGFVWGIIVSLFVLFNTFAVNQWLQYRRVGRWRDYLFGERQYVVLSLVAKSVLAWQIFANTLI 280
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: UPI001C676371 (heliorhodopsin HeR n=1 Tax=Ornithinimicrobium laminariae TaxID=2864873 RepID=UPI001C676371) HSP 1 Score: 203 bits (517), Expect = 7.850e-63 Identity = 97/150 (64.67%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVND------PDRPT-----WWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLI 417
L++LV GI+DLAALI IA N +MILFGW+MEM N+ PT WWTPFWFG +AG+ PW+ +A YL+VNV+ EG +GPP FVYGI+++IFV FN FALNQWLQYR++GRW DY+ GE YIVLSLVAKSVLAWQIFAN LI
Sbjct: 160 LVSLVFGISDLAALIGIAVANISMILFGWLMEMSNNGLMHSKEGHPTRGERAWWTPFWFGCVAGVGPWLGVAGYLIVNVAVEGGQGPPAFVYGIIISIFVFFNSFALNQWLQYRQIGRWKDYLTGERTYIVLSLVAKSVLAWQIFANVLI 309
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: A0A2E0RRW0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RRW0_9ACTN) HSP 1 Score: 202 bits (513), Expect = 1.240e-62 Identity = 94/140 (67.14%), Postives = 114/140 (81.43%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVNDPDRPTWWTPFWFGSIAGIAPWVAIAAYLVVNVSR-EGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLI 417
+IA++TGITD+AAL+ IA N AMILFGW+ME+VN P WW+PFWFG IAG APW+AI A LV NV++ +G EGPP FVYGI+V+IFVLFN FA+NQWLQY+ +G+W DY+ GE Y VLSLVAK+ LAWQIFAN LI
Sbjct: 138 IIAMITGITDMAALVVIAAANVAMILFGWVMEVVNPPGERVWWSPFWFGCIAGAAPWIAIVATLVYNVNQSDGGEGPPGFVYGIIVSIFVLFNCFAVNQWLQYKGVGKWRDYLVGERTYGVLSLVAKTALAWQIFANVLI 277
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: UPI00029B3A19 (heliorhodopsin HeR n=1 Tax=Dietzia alimentaria TaxID=665550 RepID=UPI00029B3A19) HSP 1 Score: 197 bits (502), Expect = 6.250e-61 Identity = 91/150 (60.67%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVN-----------DPDRPTWWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLI 417
LI+L+ GI+D+AALI + F N +MILFGW+MEM N D WWTPFWFG IAGI PW+A A YL+VNV EG +GPP FVYGI+V++FV FN FA+NQWLQY+++GRW +Y+ GE YIVLSLVAKS+LAWQ+FAN L+
Sbjct: 131 LISLILGISDIAALIGLGFANISMILFGWLMEMTNNGLMHGKGERSDRGERAWWTPFWFGCIAGIGPWLAAATYLIVNVGIEGGDGPPGFVYGIIVSLFVFFNSFAINQWLQYKQVGRWQNYLTGERTYIVLSLVAKSLLAWQVFANVLV 280
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: A0A4R7HWF0_9ACTN (Uncharacterized protein n=2 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7HWF0_9ACTN) HSP 1 Score: 197 bits (501), Expect = 7.870e-61 Identity = 96/141 (68.09%), Postives = 115/141 (81.56%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVNDPDRPT-WWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLID 420
+IA +TGITD+AALIAIA N AMILFGW+ME+VN PD T WW PFWFG IAG APW+AIAA L +++ EGPP FV+GILV++FVLFN FA+NQWLQY+R+G+W+DY+ GE Y VLSLVAK+ LAWQIFAN LID
Sbjct: 138 IIATITGITDVAALIAIAAANIAMILFGWVMEVVNRPDTDTVWWGPFWFGCIAGAAPWIAIAANLGYAINKTD-EGPPAFVWGILVSLFVLFNCFAVNQWLQYKRVGKWSDYLVGERTYGVLSLVAKTALAWQIFANVLID 277
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: A0A3M0GID2_9ACTN (Uncharacterized protein n=1 Tax=Tessaracoccus antarcticus TaxID=2479848 RepID=A0A3M0GID2_9ACTN) HSP 1 Score: 196 bits (499), Expect = 1.780e-60 Identity = 93/150 (62.00%), Postives = 112/150 (74.67%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVN-----------DPDRPTWWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLI 417
LI+LV GI+D+AALI + N +MILFGW+MEM N D WWTPFWFG IAGI PW+A A YL+VNV +G EGPP FVYGI+V++FV FN FA+NQWLQY+++GRW DY+ GE YIVLSLVAKS+LAWQ+FAN LI
Sbjct: 131 LISLVLGISDIAALIGLGIANVSMILFGWLMEMGNNGLMHGRHGRSDRGERAWWTPFWFGCIAGIGPWLAAAIYLIVNVGVKGGEGPPGFVYGIIVSLFVFFNSFAINQWLQYKQVGRWQDYLTGERTYIVLSLVAKSLLAWQVFANVLI 280
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Match: A0A5D0XPF0_9MICC (Uncharacterized protein n=2 Tax=Arthrobacter TaxID=1663 RepID=A0A5D0XPF0_9MICC) HSP 1 Score: 196 bits (498), Expect = 2.520e-60 Identity = 91/150 (60.67%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 1 LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVN-----DPD-RP-----TWWTPFWFGSIAGIAPWVAIAAYLVVNVSREGAEGPPTFVYGILVTIFVLFNIFALNQWLQYRRLGRWADYVHGEVVYIVLSLVAKSVLAWQIFANTLI 417
LI+L+ GI+D+AALI + N +MILFGW+MEM N D D RP WWTPFWFG +AGI PW+A+A YL+VNV EG EGPP FVYGI++++FV FN FA+NQWLQY+++GRW +Y+ GE YIVLSL+AK++LAWQ+FAN LI
Sbjct: 131 LISLILGISDIAALIGLGIANISMILFGWLMEMTNNGLMHDADGRPQRGQRAWWTPFWFGCVAGIGPWLAVAVYLIVNVGVEGGEGPPGFVYGIIISLFVFFNSFAINQWLQYKQVGRWRNYLTGERTYIVLSLIAKTLLAWQVFANVLI 280 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122052.4544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122052.4544.1 >prot_M-pyrifera_M_contig122052.4544.1 ID=prot_M-pyrifera_M_contig122052.4544.1|Name=mRNA_M-pyrifera_M_contig122052.4544.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp LIALVTGITDLAALIAIAFVNAAMILFGWIMEMVNDPDRPTWWTPFWFGSback to top mRNA from alignment at M-pyrifera_M_contig122052:107..529- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122052.4544.1 ID=mRNA_M-pyrifera_M_contig122052.4544.1|Name=mRNA_M-pyrifera_M_contig122052.4544.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=423bp|location=Sequence derived from alignment at M-pyrifera_M_contig122052:107..529- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122052:107..529- >mRNA_M-pyrifera_M_contig122052.4544.1 ID=mRNA_M-pyrifera_M_contig122052.4544.1|Name=mRNA_M-pyrifera_M_contig122052.4544.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig122052:107..529- (Macrocystis pyrifera P11B4 male)back to top |