mRNA_M-pyrifera_M_contig122017.4534.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: A0A7S1C4D7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4D7_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.970e-57 Identity = 96/132 (72.73%), Postives = 113/132 (85.61%), Query Frame = 1
Query: 10 DEEDVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
+E DV + LPDTA+LSE+LR+CLQE E LP DFT+LF+D F +T L+PEAV LYD L VKHEPLS+IPPQFETPLPPL+PAVFPPT +E PPPALDQFDLDEHFASERLRLAQL NKC+DDD+D+F++
Sbjct: 319 EEPDVSDYVYLPDTAALSERLRSCLQESEDLPKDFTQLFDDTLFKFDTDLIPEAVKLYDALNVKHEPLSLIPPQFETPLPPLQPAVFPPTLRELPPPALDQFDLDEHFASERLRLAQLTNKCTDDDLDYFVR 450
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: A0A2D4CGB3_PYTIN (Intraflagellar Transport Protein 52 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGB3_PYTIN) HSP 1 Score: 191 bits (484), Expect = 4.270e-56 Identity = 92/129 (71.32%), Postives = 111/129 (86.05%), Query Frame = 1
Query: 19 DVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
D+ E LPDT +LSE+LR+C+QE E LP DFTRLF+ F +T+L+PEAV+LY +LGVKHEPL++IPPQFE PLPPLKPAVFPPT +EPPPPALDQFDLDEHFASE LRLAQL NKCSDDD+++++K
Sbjct: 273 DLSEYNRLPDTQALSERLRSCMQESEELPKDFTRLFDSALFKFDTSLIPEAVALYKELGVKHEPLTLIPPQFELPLPPLKPAVFPPTLREPPPPALDQFDLDEHFASETLRLAQLTNKCSDDDLEYYVK 401
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: A0A8K1FT64_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT64_PYTOL) HSP 1 Score: 190 bits (482), Expect = 1.120e-55 Identity = 91/129 (70.54%), Postives = 111/129 (86.05%), Query Frame = 1
Query: 19 DVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
D+ E LPDT +LSE+LR+C+QE E LP DFTRLF+ F +T+L+PEAV+LY +LGVKHEPL++IPPQFE PLPPLKPA+FPPT +EPPPPALDQFDLDEHFASE LRLAQL NKCSDDD+++++K
Sbjct: 289 DLAEYNRLPDTQALSERLRSCMQESEELPKDFTRLFDSSLFKFDTSLIPEAVALYKELGVKHEPLTLIPPQFELPLPPLKPAMFPPTLREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVK 417
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: A0A5D6YIU5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YIU5_9STRA) HSP 1 Score: 187 bits (476), Expect = 6.800e-55 Identity = 91/129 (70.54%), Postives = 111/129 (86.05%), Query Frame = 1
Query: 19 DVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
D+ + T LPDT +LSE+LR+C+QE E LP DFTRLF+D F +T L+PEAVSL+ +LGVK+EPL++IPPQFE PLPPLK AVFPPT +EPPPPALDQFDLDEHFASE LRLAQL NKCSDDD+++++K
Sbjct: 298 DLSDYTRLPDTQALSERLRSCMQESEELPKDFTRLFDDSLFKFDTALIPEAVSLHKELGVKYEPLTLIPPQFECPLPPLKSAVFPPTLREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVK 426
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: K3WSL2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSL2_GLOUD) HSP 1 Score: 187 bits (474), Expect = 1.850e-54 Identity = 91/129 (70.54%), Postives = 111/129 (86.05%), Query Frame = 1
Query: 19 DVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
D+ E LPDT +LSE+LR+C+QE E LP DFTRLF+D F +T+L+PEAVSL+ +LGVK+EPL++IPPQFE PLPPLK AVFPPT +EPPPPALDQFDLDEHFASE LRLAQL NKCSDDD+++++K
Sbjct: 290 DLSEYNRLPDTQALSERLRSCMQESEELPKDFTRLFDDSLFKFDTSLIPEAVSLHRELGVKYEPLTLIPPQFECPLPPLKSAVFPPTLREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVK 418
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: A0A485KGV6_9STRA (Aste57867_5219 protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A485KGV6_9STRA) HSP 1 Score: 186 bits (471), Expect = 4.380e-54 Identity = 89/129 (68.99%), Postives = 111/129 (86.05%), Query Frame = 1
Query: 19 DVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
D+ + LPDT +LSE+LR+C+QE E LP DFT+LF++ F +T+L+P+AV L+ +LGVKHEPLS+IPPQFETPLPPLKPAVFPP +EPPPPALDQFDLDEHFASE LRLAQL NKCSDDD+++++K
Sbjct: 286 DLSDYNRLPDTQALSERLRSCMQEGEELPKDFTKLFDNTLFKFDTSLIPDAVLLFKELGVKHEPLSLIPPQFETPLPPLKPAVFPPILREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVK 414
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: A0A6A3U2F0_9STRA (Intraflagellar transport protein 52 n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3U2F0_9STRA) HSP 1 Score: 185 bits (470), Expect = 5.040e-54 Identity = 89/129 (68.99%), Postives = 110/129 (85.27%), Query Frame = 1
Query: 19 DVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
D+ E LPDT +LS++LR+C+QE E LP DFTRLF+D F +T+L+PEAV+LY +LGVKHEPL++IPPQFE PLPPLK AVFPP +EPPPPALDQFDLDEHFASE LRLAQL NKCSDDD++++++
Sbjct: 251 DLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDSLFKFDTSLIPEAVNLYRELGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVR 379
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: H3GGX9_PHYRM (Uncharacterized protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3GGX9_PHYRM) HSP 1 Score: 185 bits (469), Expect = 1.450e-53 Identity = 89/129 (68.99%), Postives = 110/129 (85.27%), Query Frame = 1
Query: 19 DVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
D+ E LPDT +LS++LR+C+QE E LP DFTRLF+D F +T+L+PEAV+LY +LGVKHEPL++IPPQFE PLPPLK AVFPP +EPPPPALDQFDLDEHFASE LRLAQL NKCSDDD++++++
Sbjct: 288 DLNEYVRLPDTQALSDRLRSCMQESEELPKDFTRLFDDALFKFDTSLIPEAVNLYRELGVKHEPLTLIPPQFECPLPPLKSAVFPPALREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVR 416
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: A0A812NZL0_9DINO (IFT52 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NZL0_9DINO) HSP 1 Score: 184 bits (466), Expect = 3.080e-53 Identity = 90/131 (68.70%), Postives = 107/131 (81.68%), Query Frame = 1
Query: 13 EEDVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
E DV + T LPDT SL+E+LR+CLQ+ +PLPTDFTRLF+D F VPEAV LY LGVKHEPL++IPPQF+TPLPPL PAVFPP EPPPPAL+ FDLDEHFASER+RLAQL NKC+D D+DF+++
Sbjct: 272 EGDVADYTFLPDTTSLAERLRSCLQDHDPLPTDFTRLFDDGLFSFHVDNVPEAVKLYQDLGVKHEPLTVIPPQFDTPLPPLAPAVFPPAMHEPPPPALELFDLDEHFASERIRLAQLTNKCTDGDLDFYLR 402
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Match: A0A1V9ZUQ0_9STRA (Intraflagellar Transport Protein 52 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZUQ0_9STRA) HSP 1 Score: 183 bits (465), Expect = 3.570e-53 Identity = 91/135 (67.41%), Postives = 112/135 (82.96%), Query Frame = 1
Query: 1 GEEDEEDVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLETTLVPEAVSLYDKLGVKHEPLSMIPPQFETPLPPLKPAVFPPTFKEPPPPALDQFDLDEHFASERLRLAQLANKCSDDDIDFFIK 405
G+ D D F LPDT +LSE+LR+C+QE E LP DFT+LF++ F +T+L+PEAV+L+ LGVKHEPL++IPPQFE PLPPLKPAVFPP +EPPPPALDQFDLDEHFASE LRLAQL NKCSDDD+++++K
Sbjct: 285 GDPDLSDYFR---LPDTQALSERLRSCMQEGEELPKDFTKLFDNSLFKFDTSLIPEAVALFKDLGVKHEPLTLIPPQFECPLPPLKPAVFPPILREPPPPALDQFDLDEHFASESLRLAQLTNKCSDDDLEYYVK 416 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122017.4534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122017.4534.1 >prot_M-pyrifera_M_contig122017.4534.1 ID=prot_M-pyrifera_M_contig122017.4534.1|Name=mRNA_M-pyrifera_M_contig122017.4534.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp GEEDEEDVFERTLLPDTASLSEKLRACLQEPEPLPTDFTRLFEDKPFGLEback to top mRNA from alignment at M-pyrifera_M_contig122017:2..406- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122017.4534.1 ID=mRNA_M-pyrifera_M_contig122017.4534.1|Name=mRNA_M-pyrifera_M_contig122017.4534.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=405bp|location=Sequence derived from alignment at M-pyrifera_M_contig122017:2..406- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122017:2..406- >mRNA_M-pyrifera_M_contig122017.4534.1 ID=mRNA_M-pyrifera_M_contig122017.4534.1|Name=mRNA_M-pyrifera_M_contig122017.4534.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig122017:2..406- (Macrocystis pyrifera P11B4 male)back to top |