mRNA_M-pyrifera_M_contig121948.4508.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: A0A7S2WV40_9STRA (V-type proton ATPase subunit C n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV40_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 5.510e-21 Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 28 PRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVDGESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
P + +GTLD+LM LSD+L K D S++ L +KI RQY ++ G+S L V ++ P RY+ F+WD+A++P R L L MI SN AS+EEE+++ + SD Q + QR+
Sbjct: 45 PGLLVGTLDSLMSLSDELGKHDSSVESLVRKIERQYSELTGKSQESLKVYTVPPARYLQQFSWDIARFPPRRPLPQLIEMILSNMASVEEEMKQFNVSLSDATQNLAALQRK 156
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: A0A2P4WW36_9STRA (V-type proton ATPase subunit C (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WW36_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 6.900e-21 Identity = 50/122 (40.98%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVD-GESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
A+ R LP + +GTLD+LM LSDDL++VD ++ + +KI RQ+HD++ G+ A L VD + RY++ F+WD AK+P R L ++ ++I S+ IEEEL++L+ Y++ +Q ++ QR+
Sbjct: 35 ADCVRVELPSDLLVGTLDSLMALSDDLNRVDMVIESVVRKIERQFHDLNKGDQA--LTVDGVPVERYLSFFSWDEAKHPHRRPLPEIVSIIQSSVGKIEEELKQLSTRYAEKKQQLIGLQRK 154
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: K3WZ14_GLOUD (V-type proton ATPase subunit C n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ14_GLOUD) HSP 1 Score: 94.7 bits (234), Expect = 1.850e-20 Identity = 52/122 (42.62%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVD-GESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
AE R LP + IGTLD+LM LSDDL++VD ++ + +KI RQ+HD++ G+ A L VD + RY+ F+WD AK+P R L ++ ++I ++ IEEEL++L Y++ +Q ++Q QR+
Sbjct: 35 AECFRVELPTDLLIGTLDSLMALSDDLNRVDMVIESVVRKIERQFHDLNKGDQA--LTVDGVPVDRYLNYFSWDEAKHPHRRPLPEIVSIIQTSVGKIEEELKQLGTRYTEKKQQLLQHQRK 154
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: A0A5D6XV42_9STRA (V-type proton ATPase subunit C n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV42_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.550e-20 Identity = 52/122 (42.62%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVD-GESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
AE R LP + +GTLD+LM LSDDL++VD +++G+ +KI RQ+HD++ G+ A L VD + RY+ F+WD AK+P R L ++ ++I + IE+EL++L+ YS+ +Q ++Q QR+
Sbjct: 35 AECFRVELPSDLLVGTLDSLMALSDDLNRVDMAVEGVVRKIERQFHDLNKGDQA--LTVDGVPVDRYLNFFSWDEAKHPHRRPLPEIVSIIQA----IEDELKQLSTRYSEKKQQLLQHQRK 150
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: M4BHM7_HYAAE (V-type proton ATPase subunit C n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BHM7_HYAAE) HSP 1 Score: 94.0 bits (232), Expect = 3.560e-20 Identity = 50/121 (41.32%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVDGESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
AE R LP + +GTLD+LM LSDDLS+VD ++ + +KI RQ+HD++ ++ L VD + RY++ F+WD AK+P R L ++ ++I S+ IEEE+++L Y++ +Q +V QR+
Sbjct: 36 AECIRVELPSDLLVGTLDSLMALSDDLSRVDMVIESVVRKIERQFHDLNRDNQ-DLTVDGVPVERYLSYFSWDEAKHPHRRPLPEIVSIIQSSLGKIEEEIKQLGTRYAEKKQQLVGLQRK 155
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: A0A8K1CMT2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT2_PYTOL) HSP 1 Score: 93.6 bits (231), Expect = 4.910e-20 Identity = 49/121 (40.50%), Postives = 80/121 (66.12%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVDGESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
AE R LP + +GTLD+LM LSDDL++VD ++ + +K+ RQ+HD++ + L VD + RY+ F WD AK+P R L ++ ++I S+ IEEEL++L+ YS+ +Q ++Q Q++
Sbjct: 35 AECYRMELPSDLLVGTLDSLMALSDDLNRVDLVVESVVRKVERQFHDLNKDDQA-LTVDGVPVDRYLNYFAWDEAKHPHRRPLPEIVSIIQSSVGKIEEELKQLSTRYSEKKQQLLQLQKK 154
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: A0A0P1AGD6_PLAHL (V-type proton ATPase subunit C n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGD6_PLAHL) HSP 1 Score: 93.2 bits (230), Expect = 6.250e-20 Identity = 51/122 (41.80%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVD-GESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
A+ R LP + +GTLD+LM LSDDL++V+ ++ + +KI RQ+HD+D G+ A L VD + RY++ F+WD AK+P R L ++ +I S+ IEEEL++L++ YS+ +Q ++ QR+
Sbjct: 35 ADCVRVELPSDLLVGTLDSLMALSDDLNRVEMVIESVVRKIERQFHDLDKGDQA--LTVDGVPVDRYLSFFSWDEAKHPHRRPLPEIVNIIQSSVGKIEEELKQLSSRYSEKKQQLIGFQRK 154
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: D0NJ50_PHYIT (V-type proton ATPase subunit C n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJ50_PHYIT) HSP 1 Score: 91.7 bits (226), Expect = 1.240e-19 Identity = 50/122 (40.98%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVD-GESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
A+ R LP + +GTLD+LM LSDDL++VD ++ + +KI RQ+HD++ G+ A L VD + RY+ F+WD AK+P R L ++ ++I S+ IEEEL++L+ Y++ +Q ++ QR+
Sbjct: 35 ADCVRVELPSDLLVGTLDSLMALSDDLNRVDMVIESVVRKIERQFHDLNKGDQA--LTVDGVPVERYLGFFSWDEAKHPHRRPLPEIVSIIQSSVGKIEEELKQLSTRYTEKKQQLIGLQRK 154
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: H3GFZ5_PHYRM (V-type proton ATPase subunit C n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3GFZ5_PHYRM) HSP 1 Score: 92.4 bits (228), Expect = 1.300e-19 Identity = 51/122 (41.80%), Postives = 82/122 (67.21%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVD-GESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQAMVQEQRR 363
A+ R LP + +GTLD+LM LSDDL++VD ++ + +KI RQ+HD++ G+ A L VD + RY+ F+WD AK+P R L ++ ++I S+ IEEEL++L+ YS+ +Q ++ QR+
Sbjct: 35 ADCVRVELPSDLLVGTLDSLMALSDDLNRVDLVIESVVRKIERQFHDLNKGDQA--LTVDGVPVERYLGFFSWDEAKHPHRRPLPEIVSIIQSSVGKIEEELKQLSTRYSEKKQQLIGLQRK 154
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Match: A0A835Z1N8_9STRA (V-type proton ATPase subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N8_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.920e-19 Identity = 51/114 (44.74%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 1 AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVDGESAPQLLVDSMQPVRYVTNFNWDVAKYPRDRSLADLSAMIASNGASIEEELRELTAAYSDNRQA 342
AE + LP + +GTLDTLM LSD+L +VD ++ + +KI +QY DV G A L V ++ P RYV WD AKY + L L I S IEEELR LT Y++ QA
Sbjct: 42 AEVYKVELPGGLMVGTLDTLMSLSDELVRVDGMVENVVRKIEKQYADVAGRDAEPLRVGALAPDRYVRQLEWDFAKYAVRQPLPALVGTIQSTMGKIEEELRSLTGTYTEKTQA 155 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121948.4508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121948.4508.1 >prot_M-pyrifera_M_contig121948.4508.1 ID=prot_M-pyrifera_M_contig121948.4508.1|Name=mRNA_M-pyrifera_M_contig121948.4508.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp AETSRWRLPPRMKIGTLDTLMGLSDDLSKVDDSLQGLAQKIHRQYHDVDGback to top mRNA from alignment at M-pyrifera_M_contig121948:2..517- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121948.4508.1 ID=mRNA_M-pyrifera_M_contig121948.4508.1|Name=mRNA_M-pyrifera_M_contig121948.4508.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig121948:2..517- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121948:2..517- >mRNA_M-pyrifera_M_contig121948.4508.1 ID=mRNA_M-pyrifera_M_contig121948.4508.1|Name=mRNA_M-pyrifera_M_contig121948.4508.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig121948:2..517- (Macrocystis pyrifera P11B4 male)back to top |