mRNA_M-pyrifera_M_contig121852.4498.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A3D5DFI4_9GAMM (Metalloprotease PmbA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFI4_9GAMM) HSP 1 Score: 261 bits (668), Expect = 2.360e-83 Identity = 129/176 (73.30%), Postives = 148/176 (84.09%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
V VRNGELESIEHH+DK L+L+ Y GK KGTATTTDFS +SIE+TV AAD+IAR AE DPYAGLI+P +LA EIPDLDLDHPW++ P++A+ELA RCD AAR+F P V Q+DDVSV QH GLRGYA++DGFA AY ++RH LSCVVVGK G MQRGYWYT ARDA ELEAPE VG
Sbjct: 42 VTVRNGELESIEHHEDKALSLSTYRGKSKGTATTTDFSTQSIEDTVVAADRIARLAEPDPYAGLINPKYLAQEIPDLDLDHPWNLGPESAVELAKRCDTAAREFDPGVKQIDDVSVAQHHGLRGYASSDGFAHAYLSSRHSLSCVVVGKSEGVMQRGYWYTVARDANELEAPEFVG 217
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A831RIE9_9GAMM (Metalloprotease PmbA n=1 Tax=Methylothermaceae bacterium TaxID=2268196 RepID=A0A831RIE9_9GAMM) HSP 1 Score: 196 bits (499), Expect = 4.930e-58 Identity = 97/176 (55.11%), Postives = 118/176 (67.05%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
V R GE+E++EHH+D+ L +T Y G RKG+A+TTD S S+ ETV AA IAR+A EDPYAGL DP LA EIPDLDL HPW + + AIE+AI C+ A HP + + S+N H GLR T GF YPA+RH +SC VVG+ G MQR YWYT ARD +LE PE VG
Sbjct: 41 VNARMGEVETVEHHRDQSLAVTVYFGHRKGSASTTDLSDASLRETVEAACLIARHANEDPYAGLPDPERLAREIPDLDLHHPWSLSAEQAIEIAIACERVALKHHPEIVNSEGASINTHQGLRVLGNTLGFLHGYPASRHSISCAVVGQCGGQMQRDYWYTVARDPKDLEHPETVG 216
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: UPI00041B6537 (metalloprotease PmbA n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI00041B6537) HSP 1 Score: 195 bits (496), Expect = 1.380e-57 Identity = 95/176 (53.98%), Postives = 121/176 (68.75%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
VG R GE E++EHH+D+ L +T Y G+RKG+A+TT+ S S++ET+ AA IARYA EDPYAGL DP LA +IPDLDLDHPW+I D AIE I C+ AAR+FHP + + +N H G++ T GF AYPA++H LSC VVGK MQR +WYT AR +L +P VG
Sbjct: 41 VGARLGEPETLEHHRDQSLAVTVYFGQRKGSASTTNLSEASLKETLEAACAIARYASEDPYAGLPDPDKLARDIPDLDLDHPWEITADQAIERVIECETAAREFHPEIVNSEGADLNSHHGIQVLGNTSGFLHAYPASQHSLSCAVVGKRGEQMQRDHWYTLARHPEDLNSPASVG 216
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A0S2TIC0_9GAMM (Peptidase PmbA n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TIC0_9GAMM) HSP 1 Score: 192 bits (489), Expect = 1.230e-56 Identity = 93/176 (52.84%), Postives = 121/176 (68.75%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
V VR GE+E++EH+ DK L +T Y +RKG+A+TTDF +I +TVAAA +IARY EDPYAGL D A +A E+ DLDL+HPWDI P+ AIELA+ + ARD+ + + SV+ H R Y + GF Y TRHG+SC V+G+ +MQR YWY+SARDA LEAP+ VG
Sbjct: 32 VNVRLGEVETVEHNHDKGLGVTVYFDRRKGSASTTDFGQEAIRDTVAAACRIARYTAEDPYAGLADAALMAGEVIDLDLNHPWDIAPERAIELALESEAVARDYDARITNSEGASVSSHQAFRVYGNSHGFVGGYGGTRHGVSCCVIGQQGDNMQRDYWYSSARDACSLEAPDIVG 207
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A558DFX8_9GAMM (Metalloprotease PmbA n=2 Tax=Sedimenticola TaxID=349742 RepID=A0A558DFX8_9GAMM) HSP 1 Score: 191 bits (484), Expect = 9.200e-56 Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
+ VR G++E+IEH +D+ L +T Y G+RKG+A+T+DF +I++TV AA IARY EDPY+GL D +AT++PDLDL HPWDI P+AAIEL I C+ AA DF + + S+N HSGL Y + GF YP++RH LSC V+G+ G MQR YWYT R + +LE VG
Sbjct: 45 ISVRKGDVETIEHIRDQGLGITVYFGQRKGSASTSDFKPGAIKDTVRAACNIARYTNEDPYSGLADAELMATDLPDLDLYHPWDITPEAAIELGITCEKAALDFDRRISNTEGASINSHSGLHVYGNSHGFIGGYPSSRHSLSCSVIGEQDGAMQRDYWYTVGRKSTDLETASAVG 220
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A2T9ZQV4_9GAMM (Metalloprotease PmbA n=2 Tax=gamma proteobacterium symbiont of Ctena orbiculata TaxID=1968598 RepID=A0A2T9ZQV4_9GAMM) HSP 1 Score: 190 bits (482), Expect = 1.590e-55 Identity = 95/174 (54.60%), Postives = 117/174 (67.24%), Query Frame = 1
Query: 7 VRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
VR GE E+IEH +D L +T Y G RKG+A+T+D S ++I+ETV AA ARY EDP +GL + +ATE PDLDL HPW D AIELAIRC++AARDF P + + S+N H GL Y T GF YP++RH LSC VVGK G MQR YWYT +R + LE+PE VG
Sbjct: 41 VRLGETETIEHTRDNGLGVTVYFGHRKGSASTSDLSPQAIKETVEAACNFARYTSEDPCSGLAEAELMATETPDLDLYHPWHQSVDEAIELAIRCEDAARDFDPRIFNSEGASLNSHDGLHVYGNTHGFVGGYPSSRHSLSCAVVGKQDGSMQRDYWYTLSRQSERLESPEEVG 214
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A3M0YDT0_9GAMM (Metalloprotease PmbA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YDT0_9GAMM) HSP 1 Score: 190 bits (482), Expect = 1.740e-55 Identity = 97/176 (55.11%), Postives = 121/176 (68.75%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
V VR GE+E+IE+H+DK L +T Y GKRKG+A+TTDFS +I ETV AA IAR+AEEDP AGL DP LA E PDLDL HPWDI+ + AI LA C+ AA + + S++ H G+R Y + GF AYP+TRHGLSC V+ ++ MQR YWYT+ R +LEAPE VG
Sbjct: 43 VTVRLGEVETIEYHRDKGLGVTVYMGKRKGSASTTDFSPAAIRETVKAACAIARHAEEDPCAGLPDPDLLAWEYPDLDLYHPWDIDAEGAIALARDCEKAALALDKRIQNSEGASLSSHQGMRVYGNSHGFVGAYPSTRHGLSCSVIAREGEEMQREYWYTAGRAKEDLEAPEGVG 218
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A3N9UU90_9GAMM (Metalloprotease PmbA (Fragment) n=1 Tax=Methylococcus sp. TaxID=39769 RepID=A0A3N9UU90_9GAMM) HSP 1 Score: 185 bits (470), Expect = 2.820e-55 Identity = 95/176 (53.98%), Postives = 121/176 (68.75%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
V R GE+E++EHH+ + L LT Y G+RKG+A+T+D S ++ ETVAAA +IAR+A EDP AGL D AWLATE P+LDL HPW IEP+AAIELA+ C+NAAR HP + + S+N GLR + GF Y +TRH LS V+G+ MQR W+T ARD +L APE VG
Sbjct: 32 VTARLGEVETVEHHRSRGLGLTVYIGQRKGSASTSDLSPTAMRETVAAAVRIARHAAEDPCAGLPDAAWLATEFPELDLFHPWRIEPEAAIELAVACENAARQHHPDITNSEGASLNTFQGLRVMGNSLGFLHGYASTRHSLSVSVIGERDDQMQRDDWWTVARDPRDLHAPEDVG 207
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A257SZ75_9GAMM (Metalloprotease PmbA n=1 Tax=Chromatiales bacterium 21-64-14 TaxID=1970504 RepID=A0A257SZ75_9GAMM) HSP 1 Score: 188 bits (477), Expect = 1.100e-54 Identity = 92/176 (52.27%), Postives = 116/176 (65.91%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
V VR GE+E++E+H+D+ L +T Y G RKG+A+T D ++ +TV AA IARY EDPYAGL D A +A IP LDLDHPW + DAAIEL + C+NAAR+ P + + VN H G+R YA T GF Y +TRH LSC V+ + MQR YWYT ARD ELE+ E VG
Sbjct: 49 VNVRLGEVETVEYHRDRGLGVTVYFGARKGSASTADLRTDTVRDTVRAACDIARYTAEDPYAGLADAARMARVIPQLDLDHPWMLNADAAIELTLACENAARELDPRITNSEGAGVNSHRGIRVYANTHGFMGGYASTRHSLSCAVIAQSEQGMQRDYWYTVARDRTELESAEAVG 224
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A2N6CY06_9GAMM (Metalloprotease PmbA n=2 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A2N6CY06_9GAMM) HSP 1 Score: 187 bits (475), Expect = 2.000e-54 Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 1
Query: 1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 528
+ VR GE+E+IEH +D+ L +T Y G+RKGTA+T+DF +I +TV AA IAR+ +DP +GL D +AT+IPDLDL HPWDI P+ AIEL RC++AA + P + + SVN HSGL Y + GF YP++RH LSC V+G+ G MQ YWYT +RDA +LE+ VG
Sbjct: 45 INVRKGEVETIEHTRDQGLGITVYFGQRKGTASTSDFKPEAIRDTVRAACNIARFTNDDPCSGLADADRMATDIPDLDLYHPWDITPETAIELGKRCESAALELDPRISNTEGASVNSHSGLHVYGNSHGFIGGYPSSRHSLSCSVIGQQNGSMQLDYWYTVSRDAKDLESEFDVG 220 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121852.4498.1 >prot_M-pyrifera_M_contig121852.4498.1 ID=prot_M-pyrifera_M_contig121852.4498.1|Name=mRNA_M-pyrifera_M_contig121852.4498.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADback to top mRNA from alignment at M-pyrifera_M_contig121852:3..530- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121852.4498.1 ID=mRNA_M-pyrifera_M_contig121852.4498.1|Name=mRNA_M-pyrifera_M_contig121852.4498.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig121852:3..530- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121852:3..530- >mRNA_M-pyrifera_M_contig121852.4498.1 ID=mRNA_M-pyrifera_M_contig121852.4498.1|Name=mRNA_M-pyrifera_M_contig121852.4498.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig121852:3..530- (Macrocystis pyrifera P11B4 male)back to top |