mRNA_M-pyrifera_M_contig12175.4467.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: D7FPR8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR8_ECTSI) HSP 1 Score: 155 bits (393), Expect = 1.930e-47 Identity = 76/81 (93.83%), Postives = 77/81 (95.06%), Query Frame = 1
Query: 1 QVSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQNRNDR 243
QVSRLKHLTIDIGQEVR QNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTF+AIWYILKQ R R
Sbjct: 49 QVSRLKHLTIDIGQEVRSQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFMAIWYILKQTRGGR 129
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: A0A835YRV7_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRV7_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.090e-28 Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 1 QVSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQN 231
QVS LK LTIDIG EV QN L+ GM MFDA GLLGGT+++I TMM +GGS+HMCYLVAFIV TF+ IW+++ +
Sbjct: 48 QVSMLKGLTIDIGNEVNSQNTLLDGMSNSMFDANGLLGGTMKKIGTMMKRGGSKHMCYLVAFIVLTFLVIWWLMGKK 124
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: A0A1Z5KR69_FISSO (Blocked early in transport 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KR69_FISSO) HSP 1 Score: 85.5 bits (210), Expect = 1.670e-19 Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 1
Query: 4 VSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQNRN 237
V+RLK LTIDIG EVR QN L+ GM + R LL +L RI TM+ GG++HMCYLV F VF V +W+++K +
Sbjct: 62 VARLKGLTIDIGDEVRQQNSLLDGMNDGFQNTRDLLQSSLMRIGTMLESGGAKHMCYLVGFSVFVMVFLWWLMKYQSS 139
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: A0A7S0CDW0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDW0_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.690e-19 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 1 QVSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQNRND 240
QV+RLK LTIDIG EVR+QN L+ M R LL G+LRRI M+ QGGS+HMCY+V+FIVF +++++
Sbjct: 63 QVARLKGLTIDIGNEVREQNSLLDDMGDGFNSTRDLLAGSLRRIGNMLEQGGSKHMCYMVSFIVFVMFFLYWVMSYKGQS 142
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: B7G253_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G253_PHATC) HSP 1 Score: 85.1 bits (209), Expect = 2.760e-19 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 4 VSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQNRND 240
V+RLK LTIDIG EVR+QN L+ M + R +L G+LRRI TM+ GG +HMCY+VAF VF + +W+++
Sbjct: 65 VARLKGLTIDIGNEVREQNSLLDNMGDGFENTRDMLAGSLRRIGTMLESGGMKHMCYMVAFCVFVMLFLWWLMSHKGTS 143
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: A0A7S2G7S7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7S7_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.820e-19 Identity = 38/79 (48.10%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 1 QVSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQNRN 237
Q+ RLK L+IDI +EV DQN ++ GM QM A GLL TL ++ TM+ GGS+HM YL+ F+VF+F+ I++I+
Sbjct: 46 QLGRLKELSIDINEEVADQNRMLDGMGNQMNSASGLLNETLGKLGTMLKSGGSKHMVYLIGFVVFSFIMIYWIMTHKSQ 124
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: A0A7S2UA83_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UA83_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 7.770e-19 Identity = 38/80 (47.50%), Postives = 55/80 (68.75%), Query Frame = 1
Query: 1 QVSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQNRND 240
QV+RLK LTIDIG EV++QN L+ M + R LL G+LRRI TM+ GG++HMCY+V F+VF V +++++ +
Sbjct: 108 QVARLKGLTIDIGNEVKEQNSLLDDMGDGFANTRDLLAGSLRRIGTMLESGGAKHMCYMVGFVVFVMVFLYWVMTHKGTN 187
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: A0A4D9D9V6_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9V6_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.330e-18 Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 1 QVSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQN 231
QVS LK LTIDIG EVR QN L+ M GL+G T+RR+N M+ SRHM +LVAF+VF F+ ++YI++
Sbjct: 70 QVSMLKELTIDIGTEVRSQNHLLDDMGSGFLRTDGLMGSTMRRLNKMLTTSSSRHMLWLVAFVVFVFIFVYYIIRHK 146
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: A0A7S0FSK3_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FSK3_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.920e-18 Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 4 VSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQNR 234
V+RLK LT+DIG EVR+QN L+ M + R LL G+L+RI TM+ +GG++HMCY+V F+V V +++++ R
Sbjct: 66 VARLKGLTLDIGNEVREQNSLLDNMGDGFSNTRDLLSGSLKRIGTMLEKGGAKHMCYMVGFVVAVMVLLYWLMSSKR 142
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Match: A0A7S2R889_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R889_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 9.360e-18 Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 1 QVSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQGGSRHMCYLVAFIVFTFVAIWYILKQNRND 240
QV+RLK LTI+IG EVR+QN + M+ + LL G+LRRI +M+ GG++HMCY+VAF+VF + +++I+
Sbjct: 67 QVARLKGLTINIGNEVREQNSFLDNMQDGFANTGDLLAGSLRRIGSMLESGGAKHMCYMVAFVVFVMIFLYWIMTYKGQS 146 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12175.4467.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12175.4467.1 >prot_M-pyrifera_M_contig12175.4467.1 ID=prot_M-pyrifera_M_contig12175.4467.1|Name=mRNA_M-pyrifera_M_contig12175.4467.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp QVSRLKHLTIDIGQEVRDQNDLISGMEGQMFDARGLLGGTLRRINTMMAQback to top mRNA from alignment at M-pyrifera_M_contig12175:2871..3848+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12175.4467.1 ID=mRNA_M-pyrifera_M_contig12175.4467.1|Name=mRNA_M-pyrifera_M_contig12175.4467.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig12175:2871..3848+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12175:2871..3848+ >mRNA_M-pyrifera_M_contig12175.4467.1 ID=mRNA_M-pyrifera_M_contig12175.4467.1|Name=mRNA_M-pyrifera_M_contig12175.4467.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig12175:2871..3848+ (Macrocystis pyrifera P11B4 male)back to top |