mRNA_M-pyrifera_M_contig121744.4465.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A812NZ27_9DINO (GsiA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NZ27_9DINO) HSP 1 Score: 279 bits (713), Expect = 9.140e-84 Identity = 141/174 (81.03%), Postives = 162/174 (93.10%), Query Frame = 1
Query: 1 STNDFIETPFRRFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
S ND +ETPFRRFRRRFV + ++VA +++L+VL+AIFAPL+AP++PLEQDLRN+LQGPSG HWLGTDELGRDVLSRMI+G RVSLLAA+QAV IA++LGVPPGL+AGYFGG VDT VSRINDT+MSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASV++VKE
Sbjct: 885 SQNDIVETPFRRFRRRFVRRRAALVALAFIILIVLVAIFAPLVAPYDPLEQDLRNTLQGPSGSHWLGTDELGRDVLSRMIFGARVSLLAAVQAVGIALVLGVPPGLIAGYFGGWVDTGVSRINDTVMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVMAVKE 1058
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A7J9XJG5_9PSEU (ABC transporter permease subunit n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A7J9XJG5_9PSEU) HSP 1 Score: 192 bits (488), Expect = 7.950e-58 Identity = 98/168 (58.33%), Postives = 131/168 (77.98%), Query Frame = 1
Query: 19 ETPFRRFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
E+ RRF RRF + + ++VA + +V +A FAP + P +PL Q+L +L+ PS +W GTD +GRD LSRM++G R+SLLAA +AV +A++LGV PGL+AG+FGG VD V+SRI D +M PPL+LAIAIVGVFGPNLRNAM AVG+IFAPRFLRL R++V++V+E
Sbjct: 35 ESAVRRFVRRFSSQRLAMVALVAIGFLVAVAAFAPWVVPHDPLAQNLSRALEAPSATYWFGTDAVGRDTLSRMVFGARLSLLAAAEAVTVALVLGVVPGLVAGFFGGWVDIVLSRITDAVMRIPPLILAIAIVGVFGPNLRNAMFAVGVIFAPRFLRLTRSAVMAVRE 202
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A6C7E939_ILUCY (Oligopeptide ABC transporter permease protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E939_ILUCY) HSP 1 Score: 191 bits (486), Expect = 1.200e-57 Identity = 96/164 (58.54%), Postives = 130/164 (79.27%), Query Frame = 1
Query: 31 RRFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
RRF RRF KP++VAA +++L++ A+FAPL+A +P QDL + LQ PS +W GTD+LGRD+ SRM++ RVSLLAA+Q+VV+A++LGV PG++AGY GG +D ++ RI D IM+FPPL+LAI+IV V GP LRNAM A+GIIFAPRFLRL R + L+V++
Sbjct: 31 RRFARRFYQQKPAVVAAIFLILIIGSAVFAPLLATHDPYLQDLSSYLQSPSKSNWFGTDDLGRDLYSRMLFAGRVSLLAALQSVVVALVLGVIPGIVAGYSGGWIDAIIMRITDAIMAFPPLILAISIVAVLGPGLRNAMFAIGIIFAPRFLRLGRGATLAVRQ 194
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A2E6LLQ7_9GAMM (Diguanylate cyclase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6LLQ7_9GAMM) HSP 1 Score: 190 bits (482), Expect = 3.060e-57 Identity = 94/163 (57.67%), Postives = 131/163 (80.37%), Query Frame = 1
Query: 34 RFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
RF RRF S+ A +++++ L+A+FAP +AP++PL+QDL + L+GPS HW GTDELGRDVLSR+++ +RVSLLAA+QAV+IA+ +GVPPGL+AG +GG VD ++ R D +MSFPPL+LA+AI+ V GP+L NAM+AVG++ +P FLRLMRA+ LSV +
Sbjct: 15 RFLRRFRRQTLSLWALGFLIVLTLLAVFAPWVAPYDPLQQDLDHVLEGPSADHWFGTDELGRDVLSRVLFASRVSLLAAVQAVLIALAIGVPPGLVAGMWGGWVDALIMRATDALMSFPPLILAVAIIAVLGPSLTNAMIAVGVLLSPTFLRLMRATTLSVAQ 177
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A4R2QN92_9PSEU (Peptide/nickel transport system permease protein n=1 Tax=Tamaricihabitans halophyticus TaxID=1262583 RepID=A0A4R2QN92_9PSEU) HSP 1 Score: 185 bits (470), Expect = 3.010e-55 Identity = 95/162 (58.64%), Postives = 124/162 (76.54%), Query Frame = 1
Query: 34 RFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVK 519
RF RRF P+ +A Y++++V +A+ APL+A + P +Q+L L PSG HWLGTD+LGRDV SR++Y R+SLLAA QAV ++++LGV PGLLAGY G D V+ RI D +MSFPPL+LAIA+VGV GP+L NAM +GIIFAPRFLRL+R SVLS++
Sbjct: 30 RFWRRFRRQWPAQIALGYLIVIVAVAVCAPLLATYSPFDQNLNGVLARPSGEHWLGTDDLGRDVYSRLLYAARISLLAAAQAVAVSLVLGVLPGLLAGYAGKKTDAVIMRITDAVMSFPPLILAIAVVGVLGPSLTNAMFVIGIIFAPRFLRLVRGSVLSLR 191
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A543DRL4_9PSEU (Peptide/nickel transport system permease protein/oligopeptide transport system permease protein n=2 Tax=Pseudonocardia TaxID=1847 RepID=A0A543DRL4_9PSEU) HSP 1 Score: 181 bits (459), Expect = 1.090e-53 Identity = 97/163 (59.51%), Postives = 123/163 (75.46%), Query Frame = 1
Query: 34 RFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
RF RRF P++VA +++LV L A+ APL+A +PLEQ+L LQ P G H LGTDELGRDV SR +Y R+SLLAA QAV +A+ LGV PGL+AGY G VD V+ RI D +MSFPPL+LAIA VGV GP+L NAM +G+IFAPRF+RL+R +VL+++E
Sbjct: 22 RFLRRFRRQYPALVALGFLVLVTLAAVAAPLLATHDPLEQNLSGVLQQPGGAHVLGTDELGRDVYSRALYAGRISLLAAAQAVGVAVALGVVPGLVAGYAGRRVDAVIMRITDALMSFPPLILAIAFVGVLGPSLTNAMFVIGVIFAPRFVRLVRGTVLAIRE 184
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: UPI001E324C53 (ABC transporter permease n=2 Tax=Pseudonocardia TaxID=1847 RepID=UPI001E324C53) HSP 1 Score: 180 bits (456), Expect = 3.090e-53 Identity = 95/163 (58.28%), Postives = 124/163 (76.07%), Query Frame = 1
Query: 34 RFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
RF RRF + ++ A Y++LVVL + APL+A +PL Q+L + LQ P GGH LGTD+LGRDV SR +Y RVSL+AA QAV +A++LGV PGL+AGY G VD V+ R+ D +MSFPPL+LAIA VGV GP+L NAM +G+IFAPRF+RL+R +VLS++E
Sbjct: 22 RFVRRFRRQRLALAALVYLVLVVLATVLAPLLATHDPLAQNLGSVLQQPGGGHVLGTDDLGRDVFSRALYAGRVSLVAAAQAVGVAVVLGVIPGLVAGYAGRKVDAVIMRLTDALMSFPPLILAIAFVGVLGPSLTNAMFVIGVIFAPRFVRLVRGTVLSIRE 184
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A6H1A0B5_9ACTN (ABC transporter permease n=1 Tax=Nocardioides sp. JQ2195 TaxID=2592334 RepID=A0A6H1A0B5_9ACTN) HSP 1 Score: 180 bits (457), Expect = 3.880e-53 Identity = 94/167 (56.29%), Postives = 123/167 (73.65%), Query Frame = 1
Query: 22 TPFRRFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
TP RRF RF + +VA ++ L ++AI AP + P +P Q+L+ LQ PS HWLGTD+LGRDVLSRM+ GTRVSL+AA QA IA++LGVP GL++G+FGG VD + +ND IM+ P LLLAIAIVG+ GP L NAM+A+GI+F PR LR++R SV+ +KE
Sbjct: 40 TPMRRFLIRFGKDRAGVVAVAFLALAGILAIVAPWLTPHDPNAQNLQGILQYPSSAHWLGTDDLGRDVLSRMMTGTRVSLVAAFQATSIAVVLGVPLGLVSGFFGGWVDRSIMFVNDAIMAMPGLLLAIAIVGMLGPGLTNAMIAIGIVFVPRILRIVRGSVMEIKE 206
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A6P2BGF7_9GAMM (ABC transporter permease n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6P2BGF7_9GAMM) HSP 1 Score: 179 bits (455), Expect = 4.260e-53 Identity = 89/164 (54.27%), Postives = 125/164 (76.22%), Query Frame = 1
Query: 31 RRFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
RRF RRF+ + ++ A +++L+ L A+FAP +AP++PL Q+L L+ PS HW GTDELGRDVLSR ++ R+SLLAA QAV+IA+++GVPPGL+AG GG D ++ R+ D +MSFPPL+LA+AIV GP+L NAM+AVGI+ +P FLRLMR + ++V +
Sbjct: 20 RRFLRRFMRQRTALFALGFLVLLALGAVFAPWVAPYDPLAQNLDRVLEAPSLAHWFGTDELGRDVLSRTLFAARISLLAAFQAVLIALVIGVPPGLIAGLAGGRTDNLIMRLTDALMSFPPLILAVAIVAALGPSLTNAMIAVGILLSPTFLRLMRGTAMAVAQ 183
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Match: A0A367AZH3_9ACTN (ABC transporter permease n=2 Tax=unclassified Blastococcus TaxID=2619396 RepID=A0A367AZH3_9ACTN) HSP 1 Score: 179 bits (454), Expect = 7.500e-53 Identity = 89/162 (54.94%), Postives = 127/162 (78.40%), Query Frame = 1
Query: 37 FRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEQDLRNSLQGPSGGHWLGTDELGRDVLSRMIYGTRVSLLAAIQAVVIAIILGVPPGLLAGYFGGCVDTVVSRINDTIMSFPPLLLAIAIVGVFGPNLRNAMLAVGIIFAPRFLRLMRASVLSVKE 522
F RRF +K + A +++VVL+A+FAP IAP +P + +L +L+GPSG +W GTD+LGRDVLSR+I+ +RVSL+AA A +A+++G+P GL++GYFGG VD V+ R ND +MSFP L+LA+ IVG+ GP+L NAMLA+GI++APR +R++R S LSV+E
Sbjct: 31 FVRRFRRNKVGVAALALLVVVVLLAVFAPWIAPHDPNQGELSRALEGPSGEYWFGTDDLGRDVLSRLIHASRVSLVAAALATGVALLIGLPLGLISGYFGGWVDNVIMRFNDALMSFPALILAVVIVGLLGPSLTNAMLAIGIVYAPRIMRVVRGSALSVRE 192 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121744.4465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121744.4465.1 >prot_M-pyrifera_M_contig121744.4465.1 ID=prot_M-pyrifera_M_contig121744.4465.1|Name=mRNA_M-pyrifera_M_contig121744.4465.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp STNDFIETPFRRFRRRFVTSKPSIVAACYVLLVVLIAIFAPLIAPFEPLEback to top mRNA from alignment at M-pyrifera_M_contig121744:3..524- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121744.4465.1 ID=mRNA_M-pyrifera_M_contig121744.4465.1|Name=mRNA_M-pyrifera_M_contig121744.4465.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig121744:3..524- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121744:3..524- >mRNA_M-pyrifera_M_contig121744.4465.1 ID=mRNA_M-pyrifera_M_contig121744.4465.1|Name=mRNA_M-pyrifera_M_contig121744.4465.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig121744:3..524- (Macrocystis pyrifera P11B4 male)back to top |