mRNA_M-pyrifera_M_contig121642.4450.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A2D6U8Q4_9ACTN (Uncharacterized protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U8Q4_9ACTN) HSP 1 Score: 192 bits (487), Expect = 9.680e-61 Identity = 88/115 (76.52%), Postives = 98/115 (85.22%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSFHARLGKAVPPSGPPPA 345
PQP+GVAIRIEVPWDRAN PH WRLDLLDEDGHP+ + E+PLVVHGRFEAGRPAGL+ GTPLSVPLAI FP++PVTPG+SY WQLSIDD TH+DWRQ FH R P GPPP+
Sbjct: 45 PQPMGVAIRIEVPWDRANTPHQWRLDLLDEDGHPVMINEQPLVVHGRFEAGRPAGLQAGTPLSVPLAITFPSLPVTPGRSYAWQLSIDDSTHLDWRQRFHVRETPQRP-MGPPPS 158
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A6B1B1Q7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B1Q7_9ACTN) HSP 1 Score: 185 bits (470), Expect = 5.170e-58 Identity = 87/114 (76.32%), Postives = 94/114 (82.46%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSFHARLGKAV-PPSGPP 339
PQP+GVAIRIEVPWDRANV H WR+DLLDEDGHPL + E+PLVV G FEAGRP GL+PGTPL VPLAINFP +PVTPGKSYTWQLSI+ TH DWRQSF RL K PS PP
Sbjct: 54 PQPMGVAIRIEVPWDRANVSHEWRIDLLDEDGHPLLIGERPLVVQGNFEAGRPVGLRPGTPLCVPLAINFPTIPVTPGKSYTWQLSINGSTHSDWRQSFFVRLPKQTGSPSTPP 167
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A3M2GJ80_ACTSX (Uncharacterized protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GJ80_ACTSX) HSP 1 Score: 163 bits (412), Expect = 1.620e-49 Identity = 73/102 (71.57%), Postives = 86/102 (84.31%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSFHAR 306
PQPL V IRIEVPWDRAN+ H W L+L+DEDG P+TV E+P+ V GRFEAGRPAGL+PGTPLSVP+A+NFP +PVT G+SYTWQL+ID TH WRQSF+ R
Sbjct: 43 PQPLAVVIRIEVPWDRANIAHRWHLELVDEDGAPVTVGERPVGVRGRFEAGRPAGLRPGTPLSVPVAVNFPTLPVTGGRSYTWQLAIDGVTHDTWRQSFYVR 144
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A6J6SHC0_9ZZZZ (Unannotated protein n=2 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6SHC0_9ZZZZ) HSP 1 Score: 149 bits (375), Expect = 9.090e-44 Identity = 64/104 (61.54%), Postives = 78/104 (75.00%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSFHARLG 312
PQPL +A+ + VPWDRAN+ H W ++LLDEDGHP+ + P+ V GRFEAG+PAGL+PGTPL VPLAINF +PV PG SY WQL I+DR +WR FH R G
Sbjct: 52 PQPLAIALLLSVPWDRANISHQWSIELLDEDGHPVPNAQDPVAVRGRFEAGQPAGLQPGTPLGVPLAINFATLPVKPGSSYIWQLLIEDRARPEWRVRFHVRAG 155
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A7X5WL73_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WL73_9ACTN) HSP 1 Score: 132 bits (331), Expect = 2.970e-37 Identity = 66/113 (58.41%), Postives = 70/113 (61.95%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSFHARLGKAVPPSGPP 339
PQPLGVAIRI+VPWDRAN PH WRLDLLDEDGHP+ +RE+PLVV GRFEAGRP SYTWQLSIDD T DWRQ F R KA PP
Sbjct: 38 PQPLGVAIRIQVPWDRANTPHQWRLDLLDEDGHPVMMREQPLVVRGRFEAGRPX-------------------------SYTWQLSIDDATRTDWRQGFLVRKAKATGTPSPP 125
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A520XXQ7_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XXQ7_9ACTN) HSP 1 Score: 130 bits (328), Expect = 9.860e-37 Identity = 58/102 (56.86%), Postives = 74/102 (72.55%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSFHAR 306
PQ + VA+RI VPWD+ANV H W+LDL+DEDG P+ + K + + G+FEAGRPAG+ PGT L VPL +NF A+P+ GK YTWQLSI+D T W +F R
Sbjct: 44 PQNIAVAVRIAVPWDQANVKHQWKLDLIDEDGQPVAINGKSIAIAGQFEAGRPAGVAPGTALWVPLGLNFGAIPLPGGKRYTWQLSINDATAETWNATFAVR 145
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: UPI001AA05F97 (hypothetical protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA05F97) HSP 1 Score: 130 bits (326), Expect = 1.810e-36 Identity = 58/99 (58.59%), Postives = 73/99 (73.74%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSF 297
PQPL VA+ I+VPWDRAN+ H W+L+LLDEDG P+ E P ++ G+FEAGRP G GTPL VPL INF A+PV PG+ YTW+L+ID + W+ SF
Sbjct: 42 PQPLAVALLIKVPWDRANITHDWKLELLDEDGMPVMHNETPFLIGGQFEAGRPPGWPAGTPLPVPLGINFHALPVQPGRRYTWRLAIDGTSEPTWQASF 140
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A7V9P785_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9P785_9ACTN) HSP 1 Score: 127 bits (318), Expect = 3.060e-35 Identity = 59/114 (51.75%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGH----PLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSFHARLGKAVPPS 330
P P +A+ EVPWDRAN+ H +RLDL+D DGH P E+ L++ G FEAGRP GLKPGTPL VP+AIN P P+ PG Y W+LS++ DWR F R +PPS
Sbjct: 32 PAPFAIAVLFEVPWDRANMRHRFRLDLVDSDGHVVFVPTDEGEEALMIEGEFEAGRPPGLKPGTPLDVPIAINLPGPPIPPGGRYEWRLSVNGEGTADWRLPFSTRSEDELPPS 145
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A538E687_9ACTN (Uncharacterized protein n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538E687_9ACTN) HSP 1 Score: 122 bits (305), Expect = 3.230e-33 Identity = 55/106 (51.89%), Postives = 72/106 (67.92%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVR----EKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDDRTHVDWRQSFHAR 306
P P+ +AI+IEVPWD++N PH RL+LLD DG P+ + E+ + + FE GRPAG+KPGTP+ +PLAIN P P+ G Y W+LSID RT DWR +F R
Sbjct: 41 PSPMALAIKIEVPWDQSNQPHVCRLELLDSDGQPVEMETPEGEREIFIEANFEVGRPAGVKPGTPIDLPLAINVPPFPLDAGGRYEWRLSIDGRTEPDWRVAFSTR 146
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Match: A0A351EW02_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EW02_9ACTN) HSP 1 Score: 116 bits (290), Expect = 2.620e-31 Identity = 53/89 (59.55%), Postives = 67/89 (75.28%), Query Frame = 1
Query: 1 PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAGRPAGLKPGTPLSVPLAINFPAVPVTPGKSYTWQLSIDD 267
PQPL +AI + VPWDRAN+ H W+LDL+DEDG + EKP+ V+GRFEAGRPAGL+ GTPL V LAIN A+ + PG Y++ +IDD
Sbjct: 30 PQPLALAIHVTVPWDRANISHEWKLDLVDEDGRAAMIGEKPVSVNGRFEAGRPAGLRAGTPLGVALAINLTALRLKPGVGYSFVFAIDD 118 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121642.4450.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121642.4450.1 >prot_M-pyrifera_M_contig121642.4450.1 ID=prot_M-pyrifera_M_contig121642.4450.1|Name=mRNA_M-pyrifera_M_contig121642.4450.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp PQPLGVAIRIEVPWDRANVPHTWRLDLLDEDGHPLTVREKPLVVHGRFEAback to top mRNA from alignment at M-pyrifera_M_contig121642:187..531- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121642.4450.1 ID=mRNA_M-pyrifera_M_contig121642.4450.1|Name=mRNA_M-pyrifera_M_contig121642.4450.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=345bp|location=Sequence derived from alignment at M-pyrifera_M_contig121642:187..531- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121642:187..531- >mRNA_M-pyrifera_M_contig121642.4450.1 ID=mRNA_M-pyrifera_M_contig121642.4450.1|Name=mRNA_M-pyrifera_M_contig121642.4450.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=690bp|location=Sequence derived from alignment at M-pyrifera_M_contig121642:187..531- (Macrocystis pyrifera P11B4 male)back to top |