mRNA_M-pyrifera_M_contig121634.4447.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A6B1AX96_9ACTN (Acetolactate synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AX96_9ACTN) HSP 1 Score: 317 bits (813), Expect = 1.540e-103 Identity = 162/177 (91.53%), Postives = 167/177 (94.35%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
V MVTSGPAATNVVTPL DAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPR I AFHIATTGRPGPVLVDIPKDIVDP NPRSAM WYEATDADM+LPGYHP+TQGD ELIR AAEMIR AERPVLYVGGG+LK+RAAEALL+LAEMVQIPVVTTL
Sbjct: 66 VVMVTSGPAATNVVTPLCDAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRTIRAAFHIATTGRPGPVLVDIPKDIVDPVNPRSAMTWYEATDADMDLPGYHPITQGDPELIRAAAEMIRTAERPVLYVGGGILKSRAAEALLQLAEMVQIPVVTTL 242
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A7X5WTW4_9ACTN (Acetolactate synthase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WTW4_9ACTN) HSP 1 Score: 315 bits (808), Expect = 7.500e-102 Identity = 160/177 (90.40%), Postives = 168/177 (94.92%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
VAMVTSGPAATNVVTPL DA+LDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLV+EAQDIPR+IHEAFHIATTGRPGPVLVDIPKDIVDP NPRSAM WYE +DADMELPGYHP+ GD ELIR+AAE+I AERPVLYVGGGVLKARAAEAL+ELAEMVQIPVVTTL
Sbjct: 153 VAMVTSGPAATNVVTPLCDAYLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVSEAQDIPRVIHEAFHIATTGRPGPVLVDIPKDIVDPQNPRSAMTWYEPSDADMELPGYHPIVDGDPELIRQAAELIAAAERPVLYVGGGVLKARAAEALMELAEMVQIPVVTTL 329
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A3M2GFE8_ACTSX (Acetolactate synthase large subunit (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GFE8_ACTSX) HSP 1 Score: 293 bits (749), Expect = 5.510e-98 Identity = 149/177 (84.18%), Postives = 157/177 (88.70%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
V MVTSGP ATN+VTPL DA++DSVP+V ITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEA DIPRIIHEAFHIATTGRPGPVLVD+PKD+VDPTNPRSAM WYE TDADMELPGY PVT GD + AAEMI A RPVLYVGGGVLKARAAEAL ELAE+ IPVVTTL
Sbjct: 68 VVMVTSGPGATNIVTPLCDAYMDSVPLVAITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAADIPRIIHEAFHIATTGRPGPVLVDVPKDLVDPTNPRSAMEWYEVTDADMELPGYAPVTSGDPAEVAAAAEMIAGARRPVLYVGGGVLKARAAEALRELAELTGIPVVTTL 244
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A7K2E680_9ACTN (Acetolactate synthase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E680_9ACTN) HSP 1 Score: 290 bits (743), Expect = 1.560e-92 Identity = 146/177 (82.49%), Postives = 157/177 (88.70%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
VAM+TSGP ATN VTPL DA++DS+P+VCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDP NPRSAM WYE TD MELPGY P T GD EL+R AAE+I AERPVLY GGG+LKARAA LL LAE++ +PVVTTL
Sbjct: 116 VAMITSGPGATNGVTPLCDAYMDSIPLVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPRNPRSAMTWYEPTDDIMELPGYRPATAGDPELVRAAAELICKAERPVLYAGGGILKARAAAELLALAELIDVPVVTTL 292
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A2D8GFI5_9ACTN (Acetolactate synthase n=11 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GFI5_9ACTN) HSP 1 Score: 286 bits (732), Expect = 3.540e-91 Identity = 148/177 (83.62%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
V MVTSGPAATNVVTPLADA LDSVPMVCITGQVP AAIGTDAFQECDTTGITMAVTKHN LVT+AQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNP+SAM WY+ MELPGY PV +GD LI AA +I A RPVLYVGGGVLKARAAE LL+LAE++QIPVVTTL
Sbjct: 72 VCMVTSGPAATNVVTPLADAMLDSVPMVCITGQVPLAAIGTDAFQECDTTGITMAVTKHNXLVTDAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPKSAMTWYDPDSVPMELPGYRPVMEGDPALIEEAAALIAQAXRPVLYVGGGVLKARAAEPLLKLAELLQIPVVTTL 248
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A2E4SUW8_9ACTN (Acetolactate synthase n=2 Tax=root TaxID=1 RepID=A0A2E4SUW8_9ACTN) HSP 1 Score: 272 bits (696), Expect = 5.460e-86 Identity = 141/177 (79.66%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
VAMVTSGPAATN+VTPL DA+LDSVPMV +TGQVPYAAIGTDAFQECDTTGIT ++TKHNFLVTEAQDIPRII EAFHIATTGRPGPVLVDIPKDIVDPTNPRSAM W + +M+LPGYHP T+ D +LI AA++IR AERPVLYVGGG+LKARAA+AL LAE+ I VVTTL
Sbjct: 71 VAMVTSGPAATNIVTPLCDAYLDSVPMVVVTGQVPYAAIGTDAFQECDTTGITQSITKHNFLVTEAQDIPRIIKEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMTWTDGV--EMDLPGYHPQTEVDVDLIAAAADLIRTAERPVLYVGGGILKARAADALRALAELTGIGVVTTL 245
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A3D5K2J7_9ACTN (Acetolactate synthase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K2J7_9ACTN) HSP 1 Score: 266 bits (679), Expect = 2.810e-85 Identity = 139/177 (78.53%), Postives = 153/177 (86.44%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
VAMVTSGPAATN+VTPL DA+LDSVPMV +TGQVPYAAIGTDAFQECDTTGIT ++TKHNFLVTEAQDIPR I EAFHIATTGRPGPVLVDIPKDIVDP NPRSAM W++ D +M+LPGY P T D +LI AA +IR AERPVLYVGGG+LKARAA+AL LAE+ I VVTTL
Sbjct: 71 VAMVTSGPAATNIVTPLCDAYLDSVPMVVVTGQVPYAAIGTDAFQECDTTGITQSITKHNFLVTEAQDIPRTIKEAFHIATTGRPGPVLVDIPKDIVDPVNPRSAMTWHD--DVEMDLPGYQPQTAVDVDLIAAAAGLIRVAERPVLYVGGGILKARAADALRALAELTGISVVTTL 245
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: UPI001F446443 (acetolactate synthase large subunit n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001F446443) HSP 1 Score: 270 bits (691), Expect = 3.520e-85 Identity = 140/177 (79.10%), Postives = 153/177 (86.44%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
VAMVTSGPAATN+VTPL DA++DSVP+V ITGQVPYAAIGTDAFQECDTTGITM VTKHNFL+++AQDIPRII EAFHIATTGRPGPVLVD+PKDIVDP NPRSAM WY + D LPGY PVT GD E IRRAAE+I AERPV+Y GGG+LKARAAE L ELAE+ I VVTTL
Sbjct: 75 VAMVTSGPAATNIVTPLCDAYMDSVPIVVITGQVPYAAIGTDAFQECDTTGITMPVTKHNFLISDAQDIPRIIREAFHIATTGRPGPVLVDVPKDIVDPKNPRSAMDWYWPEEVD--LPGYRPVTAGDPEAIRRAAELILAAERPVIYAGGGILKARAAEVLRELAELTGIHVVTTL 249
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A6L7JNL2_9ACTN (Acetolactate synthase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L7JNL2_9ACTN) HSP 1 Score: 269 bits (688), Expect = 8.340e-85 Identity = 139/177 (78.53%), Postives = 153/177 (86.44%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
VAMVTSGPAATN+VTPL DA++DS+PMV +TGQVPYAAIGTDAFQECDTTGITMAVTKHN+LVTEA DIP++IH+AFHIATTGRPGPVLVDIPKDIVDP NPRSAM W T D +LPGY P GD E IR AA++I AERPVLY GGG+LKARAAEALLELAE+ I VVTTL
Sbjct: 68 VAMVTSGPAATNIVTPLCDAYMDSIPMVVVTGQVPYAAIGTDAFQECDTTGITMAVTKHNYLVTEAADIPQVIHDAFHIATTGRPGPVLVDIPKDIVDPNNPRSAMEW--RTPKDHDLPGYSPNLHGDPEQIRHAAKLICAAERPVLYTGGGILKARAAEALLELAELTSIHVVTTL 242
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Match: A0A351IWJ3_9ACTN (Acetolactate synthase large subunit (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351IWJ3_9ACTN) HSP 1 Score: 263 bits (672), Expect = 1.690e-84 Identity = 138/177 (77.97%), Postives = 153/177 (86.44%), Query Frame = 1
Query: 1 VAMVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGITMAVTKHNFLVTEAQDIPRIIHEAFHIATTGRPGPVLVDIPKDIVDPTNPRSAMHWYEATDADMELPGYHPVTQGDRELIRRAAEMIRDAERPVLYVGGGVLKARAAEALLELAEMVQIPVVTTL 531
VAMVTSGPAATN+VTPL DA++DSVPMV ITGQVP AIGTDAFQECDTTGIT ++TKHNFLVTEAQDIPR I EAFHIATTGRPGPVLVDIPKDIVDP NPRSAM W + D ++LPGY+P T+ D E IR AAE+IR +ERPVLYVGGG+LKARAA+AL ELAE+ I VVTTL
Sbjct: 71 VAMVTSGPAATNIVTPLCDAYMDSVPMVVITGQVPTGAIGTDAFQECDTTGITQSITKHNFLVTEAQDIPRTIKEAFHIATTGRPGPVLVDIPKDIVDPGNPRSAMTWTD--DVTIDLPGYNPQTEVDPEAIRAAAELIRASERPVLYVGGGILKARAADALRELAELTGISVVTTL 245 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121634.4447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121634.4447.1 >prot_M-pyrifera_M_contig121634.4447.1 ID=prot_M-pyrifera_M_contig121634.4447.1|Name=mRNA_M-pyrifera_M_contig121634.4447.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp MVTSGPAATNVVTPLADAFLDSVPMVCITGQVPYAAIGTDAFQECDTTGIback to top mRNA from alignment at M-pyrifera_M_contig121634:2..532- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121634.4447.1 ID=mRNA_M-pyrifera_M_contig121634.4447.1|Name=mRNA_M-pyrifera_M_contig121634.4447.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=531bp|location=Sequence derived from alignment at M-pyrifera_M_contig121634:2..532- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121634:2..532- >mRNA_M-pyrifera_M_contig121634.4447.1 ID=mRNA_M-pyrifera_M_contig121634.4447.1|Name=mRNA_M-pyrifera_M_contig121634.4447.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig121634:2..532- (Macrocystis pyrifera P11B4 male)back to top |