mRNA_M-pyrifera_M_contig121568.4432.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A1Y1IGD7_KLENI (Sister chromatid cohesion complex Cohesin n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IGD7_KLENI) HSP 1 Score: 97.4 bits (241), Expect = 2.560e-20 Identity = 60/165 (36.36%), Postives = 89/165 (53.94%), Query Frame = 1
Query: 7 LLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIY 501
+L + KL G++ S +R+ R T+ L L+ LV+ A TT++QL+A K + +S TK T + + EE M +F VF HRYRDV IR + ++ I+EYPS+FL+D +TKY+GW +ND DA VR + ALR++Y
Sbjct: 216 ILFDEKLFDKCIGFIIAISCTGVRTFRQVGTLIGLQLVSSLVTVAKSCTDLRETTQRQLQAEKKKKNASRVADLTK---TLEEMHSKTTATEELMRKLFTGVFMHRYRDVDEFIRANSVEALGSWILEYPSMFLKDLYTKYLGWMLNDKDAHVRQTAVIALRNLY 377
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A0D2U4Y1_CAPO3 (SCD domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U4Y1_CAPO3) HSP 1 Score: 96.3 bits (238), Expect = 6.510e-20 Identity = 58/171 (33.92%), Postives = 89/171 (52.05%), Query Frame = 1
Query: 7 LLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDELL 519
LLH+ L+ WL+ S A +R+ RHTAT + L + LV+A L +++QL+ RG++S+ A +L+ N + +LEE++ + + VF RYRD ADIR + I+ YPS FL D TKY+GW +ND A R L + +Y + +
Sbjct: 383 LLHDQALIDVAITWLSALSTAHIRAFRHTATAACLEICSALVTAVKTVHAALDNSQRQLETERSKRGANSSS-AAQLERRIENFNADIEKLEEYISQLLQGVFVLRYRDTCADIRALCVTQLGVWIMGYPSYFLRDTHTKYLGWTLNDQVAAPRLATLNVIHKLYENKDFV 552
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: F0VZV4_9STRA (Cohesin subunit putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZV4_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.200e-19 Identity = 56/156 (35.90%), Postives = 86/156 (55.13%), Query Frame = 1
Query: 46 WLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 513
WLT S A +R++RHTA+++A + L A A++L+T ++QLKAA + +S++ + T L KY + + + IF + HRYRDV +DIR L P FL+D + KY+GW +ND DA+VR +R L +Y D+
Sbjct: 232 WLTTLSSAEIRAIRHTASIAAYTISMQLAEDAFKSAEQLSTLQRQLKAARGNKTTSASKKMTLLMKNKEAYTKYYKQTVDLIFLIFNGIVIHRYRDVVSDIRIASLKTLCSWTRSLPQEFLKDNYLKYVGWLLNDKDAKVRLNAVRLLTELYECDD 387
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A024G1L8_9STRA (SCD domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G1L8_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 7.650e-19 Identity = 56/168 (33.33%), Postives = 88/168 (52.38%), Query Frame = 1
Query: 10 LHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 513
L S + WLT S A +R++RHTA+++A + L AA +++L+ ++QLKAA + +S+ ++T L K + + + IF + HRYRDV +DIR L P FL+D + KY+GW +ND DA+VR ++ L +Y DE
Sbjct: 219 LFASNSIQRFVDWLTTLSSAEIRAIRHTASIAAYTISIQLAEAASGLSEQLSIVQRQLKAARGNKTTSAVKKSTALMKNKEAYTKQYKQTVDLLFLIFNGIVIHRYRDVVSDIRIASLKTLGSWTRSLPQEFLKDNYLKYVGWLLNDKDAKVRLHAVKLLNELYECDE 386
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A7N0ULZ7_KALFE (SCD domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0ULZ7_KALFE) HSP 1 Score: 91.3 bits (225), Expect = 3.510e-18 Identity = 56/168 (33.33%), Postives = 91/168 (54.17%), Query Frame = 1
Query: 10 LHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 513
L +S L ++ ++ S P R R A++ L+L+ VS A + TT++QL A K R V + + +A+Q + LEE + IF+ +F HRYRD+ +IR + + YPSLFL+D++ KY+GW +ND +A VR + AL+++Y D+
Sbjct: 188 LFDSVLFEKITDYVIALSCTPPRVYRQVASLVGLSLVTSFVSVANVLGAQRETTQRQLNAEKKKRAEGPRVDSLNKRLSAIQPKINI--LEELVRKIFQGLFVHRYRDIDPNIRTTCIQSLGYWNLSYPSLFLQDRYLKYLGWTLNDKNAGVRKASVHALQNLYKVDD 353
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: UPI00053F2D46 (sister-chromatid cohesion protein 3 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F2D46) HSP 1 Score: 90.5 bits (223), Expect = 6.500e-18 Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 10 LHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 513
L + L+ + ++ S P R R A++ L L+ ++ A + TT++QL A K R RA L + ++ + +EE M IF+ +F HRYRD+ ++IR + I+ YPSLFL+D++ KY+GW +ND A VR + AL+S+Y D+
Sbjct: 185 LFDGVLLEKCTDYVIALSCTPPRIYRQVASLIGLQLVTSFITIAKMLGSQRETTQRQLNAENKKRAEGP--RAESLNKRLMTTHEKITTIEEMMDKIFKGLFMHRYRDIDSNIRVSCIQSLGVWILSYPSLFLQDRYLKYLGWTLNDKSAGVRKASVAALQSLYEVDD 350
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A6G1GCA0_9PEZI (uncharacterized protein n=1 Tax=Eremomyces bilateralis CBS 781.70 TaxID=1392243 RepID=A0A6G1GCA0_9PEZI) HSP 1 Score: 89.7 bits (221), Expect = 1.210e-17 Identity = 54/171 (31.58%), Postives = 89/171 (52.05%), Query Frame = 1
Query: 7 LLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDELL 519
+ + L+ + WL + A R RHTATV++LA++ L + A T +QL K +G + R ++ Q ++ L+E + F++VF HRYRD+ IR D + + I +YP LFLE + +Y+GW ++D A R V+R LR ++S+ + L
Sbjct: 252 MFDDPALMENIMSWLASMTSASNRPFRHTATVASLAIVSALCDVGSELVATKAQTVRQLDGEKK-KGRPNKSRVADIEKKVADQTLHLETLDEIIKGWFDTVFVHRYRDIDPRIRVDCVQALSYWISQYPDLFLEGHYLRYLGWVLSDTHAPTRLEVVRKLRDLFSKPDRL 421
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: F2U1P2_SALR5 (SCD domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U1P2_SALR5) HSP 1 Score: 89.7 bits (221), Expect = 1.230e-17 Identity = 63/184 (34.24%), Postives = 95/184 (51.63%), Query Frame = 1
Query: 7 LLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRK---QLKA--------AGKARGSSSTVRATKLKATA---VQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDEL 516
+L + + +LT S A +R+ RHTA + L L+ A D AK + T+ QLKA GK G +T A KL+ Q + R++E + IFE + HRYRDV+ADIR V++ + EY +FL+DK+ KY GW++ND A VR V+ L +++ +E+
Sbjct: 327 ILFDDNFTDTLINFLTLLSTAQVRAFRHTAVFFGMKLGTLLIPLALDLAKDVEDTQATFDQLKADSATPTKKKGKKAGKRTTAEAKKLEEVEDAMSQASMRKERVDEILTLIFEGIAIHRYRDVSADIRVVVMEELGTWVTEYSEMFLDDKYLKYFGWELNDRSADVRVSVVDTLTRLFANEEM 510
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A833QUS8_9POAL (Sister-chromatid cohesion protein 3 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QUS8_9POAL) HSP 1 Score: 85.1 bits (209), Expect = 4.880e-16 Identity = 55/168 (32.74%), Postives = 83/168 (49.40%), Query Frame = 1
Query: 10 LHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIYSRDE 513
L + L ++ S P R R AT+ + L+ +S ++ TT++QL A K V + + A + + LEE M +F +F HRYRD+ +IR + IV YPSLFL+D + KY+GW +ND +A VR + AL+SIY D+
Sbjct: 177 LFDKALFERCMDYVIALSCTPPRIYRQVATLIGVQLVTTYISVGKTLIQQRETTQRQLNAEKKKGNDGPRVESLNRRLQATHEK--INALEEMMRKVFTGLFMHRYRDIEPEIRMSCIRALGLWIVNYPSLFLQDSYLKYLGWTLNDKNALVRKTSVLALQSIYEIDD 342
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Match: A0A3M7MSI3_9EURO (SCD domain-containing protein (Fragment) n=1 Tax=Chaetothyriales sp. CBS 135597 TaxID=2249420 RepID=A0A3M7MSI3_9EURO) HSP 1 Score: 84.7 bits (208), Expect = 6.580e-16 Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 1
Query: 46 WLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEAKRLATTRKQLKAAGKARGSSSTVRATKLKATAVQQNKYVARLEEHMLAIFESVFAHRYRDVAADIRRDVLDMFAPCIVEYPSLFLEDKFTKYMGWQMNDADARVRSCVLRALRSIY 501
W+ S A R RHTAT +L + L A + + +AT + QL A K R S++ R ++ + K + ++ H+ F++V+ HRYRDVA IR D + IV Y +FLE ++ +Y+GW M+D A R V++ L++++
Sbjct: 208 WIGTMSGANYRPFRHTATTISLTMTSALCEVAAEIQQSMATAKTQLDAEKKKR-SANKARIRSIQESIKADEKKLEAIDAHLRDAFDTVYVHRYRDVAEVIRADCVTALGNWIVTYRKMFLEGQYLRYLGWVMSDPSAPTRHEVVKQLKAMF 358 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121568.4432.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121568.4432.1 >prot_M-pyrifera_M_contig121568.4432.1 ID=prot_M-pyrifera_M_contig121568.4432.1|Name=mRNA_M-pyrifera_M_contig121568.4432.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp MRLLHESKLVAAVSGWLTPTSPAPLRSLRHTATVSALALLRGLVSAAGDEback to top mRNA from alignment at M-pyrifera_M_contig121568:6..527- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121568.4432.1 ID=mRNA_M-pyrifera_M_contig121568.4432.1|Name=mRNA_M-pyrifera_M_contig121568.4432.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig121568:6..527- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121568:6..527- >mRNA_M-pyrifera_M_contig121568.4432.1 ID=mRNA_M-pyrifera_M_contig121568.4432.1|Name=mRNA_M-pyrifera_M_contig121568.4432.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig121568:6..527- (Macrocystis pyrifera P11B4 male)back to top |