mRNA_M-pyrifera_M_contig121543.4427.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: A0A3D5D9Q9_9GAMM (EamA family transporter (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5D9Q9_9GAMM) HSP 1 Score: 216 bits (551), Expect = 6.570e-69 Identity = 112/175 (64.00%), Postives = 134/175 (76.57%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAALI 525
STG+VG RF +PYADP+TFTA+RFAIV LL + R LPR MWLHLA+SGVLIHA F+GG++ AI GV+ISIAALIAGTQPLLTA VA+ LGE+L QW+GF GF GL +VV KS+ IG LP GL G +AL GITFGTLYQKR+VVG+DL++GS +QF AL+
Sbjct: 23 STGFVGTRFVIPYADPITFTALRFAIVCTLLTAFVIASRRELPRPWSMWLHLAISGVLIHAFFVGGMFVAIYLGVNISIAALIAGTQPLLTAIVAIPFLGEALSLRQWIGFVTGFLGLSMVVTKSLEIGDLPLTGLSGAVIALCGITFGTLYQKRYVVGVDLLSGSAIQFFFALL 197
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: A0A7Y3M8S4_9DELT (DMT family transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3M8S4_9DELT) HSP 1 Score: 217 bits (552), Expect = 1.320e-67 Identity = 111/175 (63.43%), Postives = 133/175 (76.00%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAALI 525
STGYVGARFGLP+A+PLT TA+RFAIV LL +L+ R + R P MW H V+G+LIH CFIGG+++AID GV I +AAL+AG QPLLTA +LGESL QW GF +GFAGL LVV K + G LP AGL GCF+ L GITFGTLYQKR+VVG DL+AGS+VQF AA++
Sbjct: 23 STGYVGARFGLPFAEPLTLTALRFAIVVLLLVVLVLVTRRSISRDPWMWGHWIVTGILIHTCFIGGIFFAIDRGVGIGVAALVAGVQPLLTAAAGSVLLGESLGTRQWTGFLMGFAGLSLVVAKGLTDGALPLAGLIGCFIGLLGITFGTLYQKRYVVGTDLLAGSSVQFAAAVV 197
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: A0A7V8BYZ9_9RHOO (DMT family transporter n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A7V8BYZ9_9RHOO) HSP 1 Score: 171 bits (434), Expect = 5.890e-50 Identity = 88/173 (50.87%), Postives = 118/173 (68.21%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAA 519
STG++GA+ GLPYA+PLTF +RFA V ALL LL R P P+ WLH+AV+G L+H ++ GV+ AI G+ + ALI G QPLLTAF++ +++GE + QW G +GFAG+ LVV + +G+ G+ AGL +AL GIT GTLYQKRF +DL +GS +QF AA
Sbjct: 24 STGFIGAKLGLPYAEPLTFLLLRFACVIALLGLLALVLRRPWPLRPMQWLHIAVAGALLHGAYLSGVFLAIHRGMPAGVVALIVGIQPLLTAFLSTSMVGERVSGRQWAGLVLGFAGVTLVVWEKMGLAGISAAGLAFSAMALVGITLGTLYQKRFCAELDLWSGSVIQFVAA 196
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: A0A809QZD8_9PROT (DMT family transporter n=1 Tax=Candidatus Desulfobacillus denitrificans TaxID=2608985 RepID=A0A809QZD8_9PROT) HSP 1 Score: 170 bits (430), Expect = 2.350e-49 Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAA 519
STG++GA+FGLP+A+PLTF +RF V LL LL R P P++WLH+AV+G L+H ++ GV+ AI G+ + ALI G QPLLTAF++ +++GE + QWLG +GFAG+ LVV + +G+ GL AGL +AL IT GTLYQKRF +DL +GS +QF AA
Sbjct: 24 STGFIGAKFGLPFAEPLTFLLIRFTFVIGLLGLLALLLRRPWPHRPILWLHIAVAGSLLHGGYLSGVFLAIHHGMPAGVVALIVGIQPLLTAFLSASMVGERVVPRQWLGLVLGFAGVTLVVWEKLGVAGLSAAGLAFSAMALFSITLGTLYQKRFCADLDLWSGSVIQFIAA 196
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: UPI001AC0B1CE (Putative amino-acid metabolite efflux pump n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=UPI001AC0B1CE) HSP 1 Score: 166 bits (421), Expect = 5.300e-48 Identity = 85/173 (49.13%), Postives = 113/173 (65.32%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAA 519
STG++GA+ GLPYA+PL+F +RFA V LL LL R P P WLH+AV+G L+H ++ GV+ AI G+ + ALI G QPLLTAF++ +++GE + QW+G +GF G+ LVV +G GGL AG LAL IT GTLYQKR+ +DL +GS +QF AA
Sbjct: 24 STGFIGAKLGLPYAEPLSFLLIRFACVIGLLGLLALVLRRPWPHRPTQWLHIAVAGALLHGGYLSGVFLAIHTGMAAGVVALIVGIQPLLTAFLSASMVGERVSGRQWMGLVLGFGGVTLVVWDKLGFGGLSGAGFAFSTLALVSITLGTLYQKRYCADLDLWSGSVIQFVAA 196
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: A0A363SNW3_9RHOO (EamA family transporter n=1 Tax=Rhodocyclales bacterium TaxID=2072421 RepID=A0A363SNW3_9RHOO) HSP 1 Score: 166 bits (421), Expect = 8.730e-48 Identity = 84/173 (48.55%), Postives = 114/173 (65.90%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAA 519
STG++GA+ GLP+A+PLTF +RFA V LL LL R P P+ W H+AV+G L+H ++ GV+ AI G+ + AL+ G QPLLTAF++ +++GE + QW G A+GF G+ LVV + +G GL AGL +AL IT GTLYQKRF +DL +GS +QF AA
Sbjct: 24 STGFIGAKLGLPFAEPLTFLLIRFACVIGLLGLLALVLRRPWPHRPIQWFHIAVAGTLLHGGYLSGVFLAIHTGMPAGVVALVVGIQPLLTAFLSASMVGERVSGRQWAGLALGFCGVTLVVWEKLGFAGLSGAGLAFSVMALLSITLGTLYQKRFCAELDLWSGSVIQFVAA 196
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: UPI001BB87CF3 (DMT family transporter n=1 Tax=Sulfuritalea sp. TaxID=2480090 RepID=UPI001BB87CF3) HSP 1 Score: 166 bits (419), Expect = 8.770e-48 Identity = 85/172 (49.42%), Postives = 113/172 (65.70%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCA 516
STG++GA+ GLPYA+PLTF +RFA V ALL L R P+ P+ WLH+A +GVL+H ++ GV+ AI G+ + ALI G QPLLTAF++ +++GE + QW G +GF G+ LVV +G GL AGL +AL IT GTLYQKRF +DL +GS +QF A
Sbjct: 17 STGFIGAKLGLPYAEPLTFLLIRFACVIALLGSLALALRRPWPQRPMQWLHIAFAGVLLHGGYLSGVFLAIHGGMPAGVVALIVGIQPLLTAFLSASMVGERVSGRQWAGLVLGFGGVILVVSDKLGFSGLSGAGLAFAAMALVSITVGTLYQKRFCAELDLWSGSVIQFAA 188
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: V6EYX8_MAGGM (Uncharacterized protein n=3 Tax=Rhodospirillaceae TaxID=41295 RepID=V6EYX8_MAGGM) HSP 1 Score: 164 bits (415), Expect = 4.000e-47 Identity = 87/178 (48.88%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIG---IGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAALI 525
STG++GA++GLPYA+P TF ++RF ++ +LLA L PR P +HL VSG L+HA ++GGV+ AI G+ +AAL+ G QP+LTA VA + GE +R QWLG +G G+ LV+ G + GL WAG+G +AL GIT GTLYQKRF G+DL GS VQ+ AL+
Sbjct: 19 STGFIGAKYGLPYAEPFTFLSIRFVLIISLLAALALAARAPWPRQPRQIVHLLVSGTLVHAAYLGGVFAAIHHGLPSGMAALLVGLQPILTALVAGPLFGEEIRVRQWLGLLLGLVGVTLVLAARNGGLSVDGLSWAGIGFALVALLGITAGTLYQKRFGQGMDLRTGSLVQYVGALL 196
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: A0A2N2TXQ6_9PROT (EamA family transporter n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-14 TaxID=2013705 RepID=A0A2N2TXQ6_9PROT) HSP 1 Score: 163 bits (413), Expect = 8.420e-47 Identity = 84/173 (48.55%), Postives = 111/173 (64.16%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVVVKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAA 519
STG++GA+ GLPYA+PLTF +RFA V LL L R P P W H+AV+G L+H ++ GV+ AI G+ + ALI G QPLLTAF++ ++GE + QW+G +GF G+ LVV +G GL AGL ++L ITFGTLYQKRF +DL +GS +QF AA
Sbjct: 24 STGFIGAKLGLPYAEPLTFLLIRFACVIGLLGTLALALRRPWPHKPTQWFHIAVAGALLHGGYLSGVFLAIHGGMAAGVVALIVGIQPLLTAFLSNTMVGERVSGRQWMGLLLGFGGVALVVSDKLGWVGLSGAGLAFSVMSLLSITFGTLYQKRFCAELDLWSGSVIQFVAA 196
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Match: M2YCZ4_9PROT (DMT family permease n=2 Tax=Magnetospirillum caucaseum TaxID=1244869 RepID=M2YCZ4_9PROT) HSP 1 Score: 163 bits (412), Expect = 8.880e-47 Identity = 84/177 (47.46%), Postives = 115/177 (64.97%), Query Frame = 1
Query: 1 STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLHLAVSGVLIHACFIGGVYYAIDAGVDISIAALIAGTQPLLTAFVAVAVLGESLRRAQWLGFAIGFAGLGLVV---VKSIGIGGLPWAGLGGCFLALAGITFGTLYQKRFVVGIDLMAGSTVQFCAAL 522
STG++GA++GLPYA+P TF +RFAIV LL +L+ + P P +WLHL +SG+L+HA ++GGV+ AI GV + AL+AG QPLLTA V +LGE + QW G A+G AG+ +V+ + + G W G+ AL IT GTLYQKRF G+DL G+ +Q+ AAL
Sbjct: 10 STGFIGAKYGLPYAEPFTFLVLRFAIVIVLLGVLVAASRAKFPGDPRLWLHLGISGLLVHAIYLGGVFGAIRHGVPSGLVALVAGLQPLLTAAVVGPLLGEIVGARQWGGLALGLAGVAMVLSTRLTGVNFDGFGWDGMAFAIAALLAITGGTLYQKRFCTGMDLRTGTLIQYMAAL 186 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121543.4427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121543.4427.1 >prot_M-pyrifera_M_contig121543.4427.1 ID=prot_M-pyrifera_M_contig121543.4427.1|Name=mRNA_M-pyrifera_M_contig121543.4427.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp STGYVGARFGLPYADPLTFTAVRFAIVTALLALLITGQARRLPRSPVMWLback to top mRNA from alignment at M-pyrifera_M_contig121543:2..526+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121543.4427.1 ID=mRNA_M-pyrifera_M_contig121543.4427.1|Name=mRNA_M-pyrifera_M_contig121543.4427.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig121543:2..526+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121543:2..526+ >mRNA_M-pyrifera_M_contig121543.4427.1 ID=mRNA_M-pyrifera_M_contig121543.4427.1|Name=mRNA_M-pyrifera_M_contig121543.4427.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig121543:2..526+ (Macrocystis pyrifera P11B4 male)back to top |