mRNA_M-pyrifera_M_contig121539.4426.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig121539.4426.1
Unique NamemRNA_M-pyrifera_M_contig121539.4426.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: A0A8B6DLG6_MYTGA (Vitellogenic carboxypeptidase-like protein n=3 Tax=Mytilus TaxID=6548 RepID=A0A8B6DLG6_MYTGA)

HSP 1 Score: 139 bits (349), Expect = 1.240e-36
Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = 1
Query:   13 ESYLVNDILQSVGETLPTLMDNYKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFVKD 351
            E +L+ND++ +V   + TLM+NYKV+ YNGQ DII+  P  + F  S+PW G   +L ++R IWKV+P D +VAGYVRQ   + Q+VVR AGH++P DQPER LDMITRFV++
Sbjct:  358 EKHLLNDVMDTVKPWITTLMENYKVMFYNGQLDIIIPVPMTEAFLLSVPWSGAQKYLEAERMIWKVNPSDREVAGYVRQVNNFYQVVVRTAGHILPYDQPERGLDMITRFVEN 470          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: A0A7S4KUD2_9EUKA (Carboxypeptidase n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KUD2_9EUKA)

HSP 1 Score: 134 bits (337), Expect = 5.490e-35
Identity = 63/122 (51.64%), Postives = 86/122 (70.49%), Query Frame = 1
Query:    1 NSTTESYLVNDILQSVGETLPTLMDNYKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPD--DYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFVKDLPY 360
            N T +  L  D ++SV + +PTL+++YKV++YNGQ DIIL  PQ ++F R++ W GQD +L S + IW V     D  +AGY+RQ Q  TQI+VR AGHL+P DQPERALDMIT ++ D P+
Sbjct:  332 NITVDQMLQGDWMKSVRDVIPTLVNDYKVMIYNGQYDIILPGPQCEDFLRTLVWNGQDEYLRSQKSIWTVGDSGTDNDIAGYIRQVQGLTQIIVRQAGHLLPQDQPERALDMITNWILDQPF 453          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: A0A152A6X2_9MYCE (Carboxypeptidase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6X2_9MYCE)

HSP 1 Score: 133 bits (334), Expect = 2.660e-34
Identity = 65/120 (54.17%), Postives = 82/120 (68.33%), Query Frame = 1
Query:    1 NSTTESYLVNDILQSVGETLPTLMDNYKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFVKDLPY 360
            N+    +L  DI +SV + +PTL++NYKVL YNGQ D I+     +   R+I W G   F+ ++R IWK+  D+  VAGYVRQ Q  TQIVVRDAGH+ P DQPER LDMITRFV +LPY
Sbjct:  377 NNNVYLHLQEDIPKSVIQYVPTLIENYKVLFYNGQFDFIVGVSLTETMIRTIQWSGIQPFILTNRIIWKIPSDNIDVAGYVRQYQNLTQIVVRDAGHIAPFDQPERCLDMITRFVNNLPY 496          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: A0A6M2D6D9_RHIMP (Putative serine carboxypeptidase n=6 Tax=Rhipicephalinae TaxID=426437 RepID=A0A6M2D6D9_RHIMP)

HSP 1 Score: 132 bits (332), Expect = 3.650e-34
Identity = 66/119 (55.46%), Postives = 88/119 (73.95%), Query Frame = 1
Query:   10 TESYLVNDILQSVGETLPTLMDN--YKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFVKDLPY 360
            TES+L  DI+QSV   L +LMD   YKVL+YNGQ DII++ P   NF  SIPW G++AF  ++R+IWK  PD   VAGYVR+   +TQ++VR+AGH++P DQP+ ALD+ITRF+ D P+
Sbjct:  358 TESHLKEDIMQSVKPWLASLMDKPQYKVLIYNGQLDIIIAYPLTDNFVSSIPWSGKEAFDKAERKIWK-RPDGNGVAGYVRKVGNFTQVLVRNAGHILPYDQPDVALDLITRFIDDKPF 475          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: A0A674I3V3_TERCA (Carboxypeptidase n=2 Tax=Durocryptodira TaxID=1579337 RepID=A0A674I3V3_TERCA)

HSP 1 Score: 130 bits (326), Expect = 3.750e-34
Identity = 55/114 (48.25%), Postives = 85/114 (74.56%), Query Frame = 1
Query:    4 STTESYLVNDILQSVGETLPTLMDNYKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFV 345
            ST E +L+ D+++++   L  +MDNY+VL+YNGQ DII++AP  + F  ++PW   + + +++R IW++HP D +VAGYVRQA  + Q++VR  GH++P DQPER+LDMI RF+
Sbjct:  223 STVEKHLLEDVMKTIKPWLAVIMDNYRVLLYNGQLDIIVAAPLTERFLPTVPWSKVEEYKSAERLIWRIHPLDKEVAGYVRQAGEFYQVIVRGGGHILPYDQPERSLDMIDRFI 336          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: A0A6M2CIT4_RHIMP (Putative serine carboxypeptidase (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CIT4_RHIMP)

HSP 1 Score: 128 bits (322), Expect = 4.410e-34
Identity = 66/118 (55.93%), Postives = 87/118 (73.73%), Query Frame = 1
Query:   10 TESYLVNDILQSVGETLPTLMDN-YKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFVKDLPY 360
            TE +L  DI+QSV   L +LMD  YKVL+YNGQ DII S PQ  NF  SIPW G++AF  ++R+IW+  PD+  VAGYV +   +TQ++VR+AGH++P DQPE ALD+ITRF+ D P+
Sbjct:  175 TEKHLREDIMQSVKPWLASLMDKQYKVLIYNGQLDII-SYPQMDNFVSSIPWSGKEAFDKAERKIWR-RPDENGVAGYVHKVANFTQVLVRNAGHILPYDQPEVALDLITRFIDDKPF 290          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: A0A6P4YFI9_BRABE (Carboxypeptidase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YFI9_BRABE)

HSP 1 Score: 131 bits (330), Expect = 7.420e-34
Identity = 56/114 (49.12%), Postives = 83/114 (72.81%), Query Frame = 1
Query:    4 STTESYLVNDILQSVGETLPTLMDNYKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFV 345
            S  E +L++D+++SV   + T+M+NYKVL+YNGQ D+I++ P  +NF  S+PW G   +  SDR +WK++P D +VAG+VRQ   + Q++V+  GH++P DQPERA DMI RFV
Sbjct:  362 SEVEKHLLSDVMKSVAPWVATIMENYKVLIYNGQLDVIVAGPLTENFLWSLPWSGLQQYQKSDRTVWKINPSDTEVAGFVRQVGNFYQVIVKGGGHILPFDQPERAFDMIDRFV 475          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: G3MIG0_AMBMU (Uncharacterized protein (Fragment) n=2 Tax=Amblyomma TaxID=6942 RepID=G3MIG0_AMBMU)

HSP 1 Score: 128 bits (322), Expect = 8.760e-34
Identity = 66/119 (55.46%), Postives = 85/119 (71.43%), Query Frame = 1
Query:   10 TESYLVNDILQSVGETLPTLMDN--YKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFVKDLPY 360
            TES+L  DI+QSV   L +LMD   YKVL+YNGQ DII++     NF  SIPW G+ AF  + R IWK +P    VAGYVR+   +TQ++VRDAGH++P DQPE ALD+ITRF++D P+
Sbjct:  205 TESHLREDIMQSVKPWLASLMDKPQYKVLIYNGQLDIIIAYSLTDNFVMSIPWSGKAAFEKAPRMIWK-NPSGVGVAGYVRKVGNFTQVLVRDAGHILPYDQPEVALDLITRFIEDKPF 322          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: A0A7R9QK47_9ACAR (Carboxypeptidase n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9QK47_9ACAR)

HSP 1 Score: 126 bits (317), Expect = 1.830e-33
Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = 1
Query:    4 STTESYLVNDILQSVGETLPTLMD-NYKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFVKD 351
            +T E +++NDI+QSV   + TL+D +YKVL+Y+GQ DII++AP  ++F RSI W   D +  +DR IWKV   D  VAGYVR    +TQ++VR+ GH++P DQP   LDMITRFVK+
Sbjct:  159 NTVEMHIINDIMQSVKPWVATLLDADYKVLIYSGQLDIIVAAPLTESFVRSIEWSKADQYKKADRLIWKVTDKDPSVAGYVRAVDKFTQVIVRNGGHILPYDQPRATLDMITRFVKN 275          
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Match: K1Q7K0_CRAGI (Putative serine carboxypeptidase CPVL n=3 Tax=Crassostrea gigas TaxID=29159 RepID=K1Q7K0_CRAGI)

HSP 1 Score: 130 bits (328), Expect = 1.990e-33
Identity = 56/113 (49.56%), Postives = 83/113 (73.45%), Query Frame = 1
Query:   13 ESYLVNDILQSVGETLPTLMDNYKVLMYNGQNDIILSAPQAQNFYRSIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVPADQPERALDMITRFVKD 351
            E +L+ND++ +V   + TLM+NYKV+ YNGQ DII+  P  + F  SI W G+D + T+DR IW+V+P D +VAGYVR  + + Q++VR+AGH++P DQPER  D+I RF+++
Sbjct:  395 EIHLINDVMDTVKPWITTLMENYKVMFYNGQLDIIIPVPMTEFFLLSIDWSGKDLYRTTDRVIWRVNPSDKEVAGYVRVVKNFYQVIVRNAGHILPYDQPERGYDLIQRFIEN 507          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121539.4426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8B6DLG6_MYTGA1.240e-3653.98Vitellogenic carboxypeptidase-like protein n=3 Tax... [more]
A0A7S4KUD2_9EUKA5.490e-3551.64Carboxypeptidase n=1 Tax=Paramoeba aestuarina TaxI... [more]
A0A152A6X2_9MYCE2.660e-3454.17Carboxypeptidase n=1 Tax=Tieghemostelium lacteum T... [more]
A0A6M2D6D9_RHIMP3.650e-3455.46Putative serine carboxypeptidase n=6 Tax=Rhipiceph... [more]
A0A674I3V3_TERCA3.750e-3448.25Carboxypeptidase n=2 Tax=Durocryptodira TaxID=1579... [more]
A0A6M2CIT4_RHIMP4.410e-3455.93Putative serine carboxypeptidase (Fragment) n=1 Ta... [more]
A0A6P4YFI9_BRABE7.420e-3449.12Carboxypeptidase n=1 Tax=Branchiostoma belcheri Ta... [more]
G3MIG0_AMBMU8.760e-3455.46Uncharacterized protein (Fragment) n=2 Tax=Amblyom... [more]
A0A7R9QK47_9ACAR1.830e-3352.14Carboxypeptidase n=1 Tax=Medioppia subpectinata Ta... [more]
K1Q7K0_CRAGI1.990e-3349.56Putative serine carboxypeptidase CPVL n=3 Tax=Cras... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121539contigM-pyrifera_M_contig121539:173..532 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score129.4
Seed ortholog evalue1.1e-27
Seed eggNOG ortholog13735.ENSPSIP00000017587
Preferred nameCPVL
KEGG koko:K09645
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0006403,GO:0006508,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009056,GO:0009057,GO:0009987,GO:0015931,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0033036,GO:0033227,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0050657,GO:0050658,GO:0051179,GO:0051234,GO:0051236,GO:0051603,GO:0070008,GO:0070011,GO:0071702,GO:0071704,GO:0071705,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.Belongs to the peptidase S10 family
EggNOG OGs38FWP@33154,3BC5G@33208,3CVVJ@33213,48A8N@7711,492VW@7742,4C7GM@8459,COG2939@1,KOG1282@2759
COG Functional cat.O
Best tax levelTestudines
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons1
Model size360
Cds size360
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815734.1944768-CDS-M-pyrifera_M_contig121539:172..5321622815734.1944768-CDS-M-pyrifera_M_contig121539:172..532Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig121539 173..532 -
1692277544.2318764-CDS-M-pyrifera_M_contig121539:172..5321692277544.2318764-CDS-M-pyrifera_M_contig121539:172..532Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig121539 173..532 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121539.4426.1prot_M-pyrifera_M_contig121539.4426.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig121539 173..532 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig121539.4426.1

>prot_M-pyrifera_M_contig121539.4426.1 ID=prot_M-pyrifera_M_contig121539.4426.1|Name=mRNA_M-pyrifera_M_contig121539.4426.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
NSTTESYLVNDILQSVGETLPTLMDNYKVLMYNGQNDIILSAPQAQNFYR
SIPWKGQDAFLTSDRQIWKVHPDDYQVAGYVRQAQTYTQIVVRDAGHLVP
ADQPERALDMITRFVKDLPY
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mRNA from alignment at M-pyrifera_M_contig121539:173..532-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig121539.4426.1 ID=mRNA_M-pyrifera_M_contig121539.4426.1|Name=mRNA_M-pyrifera_M_contig121539.4426.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=360bp|location=Sequence derived from alignment at M-pyrifera_M_contig121539:173..532- (Macrocystis pyrifera P11B4 male)
AACTCCACCACTGAGTCGTACCTCGTCAACGACATTCTCCAGAGCGTGGG AGAGACCCTGCCGACGCTCATGGACAACTACAAGGTGCTCATGTACAACG GCCAGAACGACATCATTCTCTCTGCTCCCCAGGCGCAGAACTTCTACCGC TCCATCCCCTGGAAGGGACAGGACGCCTTCCTCACCTCTGACAGACAGAT CTGGAAGGTGCACCCGGACGACTATCAGGTTGCTGGCTACGTGAGGCAGG CCCAGACCTACACACAGATCGTCGTTCGTGACGCTGGCCACCTTGTGCCT GCCGACCAGCCCGAGAGGGCCCTCGACATGATCACTCGCTTTGTGAAGGA CCTCCCCTAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig121539:173..532-

>mRNA_M-pyrifera_M_contig121539.4426.1 ID=mRNA_M-pyrifera_M_contig121539.4426.1|Name=mRNA_M-pyrifera_M_contig121539.4426.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig121539:173..532- (Macrocystis pyrifera P11B4 male)
AACTCCACCACTGAGTCGTACCTCGTCAACGACATTCTCCAGAGCGTGGG
AGAGACCCTGCCGACGCTCATGGACAACTACAAGGTGCTCATGTACAACG
GCCAGAACGACATCATTCTCTCTGCTCCCCAGGCGCAGAACTTCTACCGC
TCCATCCCCTGGAAGGGACAGGACGCCTTCCTCACCTCTGACAGACAGAT
CTGGAAGGTGCACCCGGACGACTATCAGGTTGCTGGCTACGTGAGGCAGG
CCCAGACCTACACACAGATCGTCGTTCGTGACGCTGGCCACCTTGTGCCT
GCCGACCAGCCCGAGAGGGCCCTCGACATGATCACTCGCTTTGTGAAGGA
CCTCCCCTACAACTCCACCACTGAGTCGTACCTCGTCAACGACATTCTCC
AGAGCGTGGGAGAGACCCTGCCGACGCTCATGGACAACTACAAGGTGCTC
ATGTACAACGGCCAGAACGACATCATTCTCTCTGCTCCCCAGGCGCAGAA
CTTCTACCGCTCCATCCCCTGGAAGGGACAGGACGCCTTCCTCACCTCTG
ACAGACAGATCTGGAAGGTGCACCCGGACGACTATCAGGTTGCTGGCTAC
GTGAGGCAGGCCCAGACCTACACACAGATCGTCGTTCGTGACGCTGGCCA
CCTTGTGCCTGCCGACCAGCCCGAGAGGGCCCTCGACATGATCACTCGCT
TTGTGAAGGACCTCCCCTAC
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