mRNA_M-pyrifera_M_contig121440.4410.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A2E6E1W0_9ACTN (Alcohol dehydrogenase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6E1W0_9ACTN) HSP 1 Score: 318 bits (815), Expect = 1.540e-106 Identity = 154/177 (87.01%), Postives = 164/177 (92.66%), Query Frame = 1
Query: 1 KTLAAGMCHSDEHAHDGTMPVTLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGGFRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
KT AAGMCHSDEHAHDGTMPV LP++GGHEGAG VIGLGPGVTEFE+GDHISCSFIPSCGKC WC+ GQQNLCDLGAHLMEPGM+ G FRHHT+ G LTPLLKLGTF+ HMVLSVDSAIKVQKD+ GPAALVSCGVTTGYGSAVNRA+VTAGDTVV+VGCGGLGTAAIQGAKVAG
Sbjct: 33 KTTAAGMCHSDEHAHDGTMPVPLPIIGGHEGAGVVIGLGPGVTEFEVGDHISCSFIPSCGKCTWCARGQQNLCDLGAHLMEPGMIDGTFRHHTSDGTTLTPLLKLGTFAXHMVLSVDSAIKVQKDVPAGPAALVSCGVTTGYGSAVNRAEVTAGDTVVVVGCGGLGTAAIQGAKVAG 209
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A7K1ZD16_9ACTN (NDMA-dependent alcohol dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZD16_9ACTN) HSP 1 Score: 309 bits (791), Expect = 6.720e-103 Identity = 150/177 (84.75%), Postives = 159/177 (89.83%), Query Frame = 1
Query: 1 KTLAAGMCHSDEHAHDGTMPVTLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGGFRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
KTLAAGMCHSDEHAHDGTMP +PLVGGHEGAG V+ GPGVTEFE+GDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEP MM GGFRHH++ GEDL LKLGTF+EHMV+SV+SAIK+ KDI GPAALVSCGVTTGYGSAVNRADV GDTVVIVGCGGLG AAIQGA VAG
Sbjct: 33 KTLAAGMCHSDEHAHDGTMPAPMPLVGGHEGAGVVLATGPGVTEFEVGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPEMMGGGFRHHSSTGEDLCAFLKLGTFAEHMVVSVNSAIKIDKDIPAGPAALVSCGVTTGYGSAVNRADVKPGDTVVIVGCGGLGHAAIQGAAVAG 209
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A6L7XA18_9ACTN (NDMA-dependent alcohol dehydrogenase n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XA18_9ACTN) HSP 1 Score: 263 bits (671), Expect = 1.070e-84 Identity = 126/179 (70.39%), Postives = 149/179 (83.24%), Query Frame = 1
Query: 1 KTLAAGMCHSDEHAHDGTMPVTLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMM--AGGFRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
KT AAGMCHSDEHA +G+MPV LP+VGGHEGAG V+ +G GV E +GDHIS SF+PSCG+CRWC+ GQQ+LCDLG HL+ PGM+ A GFRHH A G DLTP+LKLGTF+E+MV+SVDSA+KV D+ AALVSCGVTTG+GS NRADV GDTVV+VGCGGLG+AA+Q AK+AG
Sbjct: 33 KTTAAGMCHSDEHARNGSMPVPLPIVGGHEGAGVVVEVGEGVAELAVGDHISASFVPSCGRCRWCADGQQHLCDLGIHLLSPGMLPPAEGFRHHDAGGTDLTPMLKLGTFAEYMVVSVDSAVKVDPDVPAPIAALVSCGVTTGFGSVANRADVRPGDTVVVVGCGGLGSAALQAAKIAG 211
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A3M2FR24_ACTSX (NDMA-dependent alcohol dehydrogenase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FR24_ACTSX) HSP 1 Score: 226 bits (577), Expect = 2.330e-70 Identity = 115/190 (60.53%), Postives = 138/190 (72.63%), Query Frame = 1
Query: 1 KTLAAGMCHSDEHAHDGTM------------PVTLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGG-FRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
KT AAG+CHSDEH G + P P++GGHEG+G V+ +G GVT + GDH+S SFIPSCG+CRWCSSG QNLCDLGA M PGM+ G FRHH+A G+DL + KLGTF+EHMV+S DS IKV+ D+ P ALVSCGV TG+GSAVNRA V GDT V+VGCGG+G A+QGA+VAG
Sbjct: 33 KTKAAGLCHSDEHLVTGDLAPPTAVMEEMGLPSMFPIIGGHEGSGVVLEVGEGVTHVQPGDHVSVSFIPSCGRCRWCSSGMQNLCDLGAQTMVPGMITDGTFRHHSADGKDLGTMAKLGTFAEHMVVSADSLIKVEPDLPFIPVALVSCGVATGFGSAVNRAGVKPGDTTVVVGCGGIGMNAVQGARVAG 222
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A7X6AQ07_9ACTN (NDMA-dependent alcohol dehydrogenase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AQ07_9ACTN) HSP 1 Score: 224 bits (572), Expect = 1.150e-69 Identity = 114/186 (61.29%), Postives = 141/186 (75.81%), Query Frame = 1
Query: 1 KTLAAGMCHSDEH---AHDGTMPV-----TLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGG-FRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
KT AAG+CHSDEH H GT P LP++GGHEG+G VI +G GVT+ E+GDH++ SF+P+CG+CRWC+SGQQNLCDLGA + GM+ G HH GE++ + KLGTF+EHM+LS DS +KV KDI P ALVSCGV TGYG+AVNRA V+AGDTVV+VGCGG+G+ AIQGA+ AG
Sbjct: 33 KTHAAGLCHSDEHLVTGHIGTRPDHEGPGLLPVIGGHEGSGVVIEVGEGVTDVEVGDHVAVSFVPACGRCRWCASGQQNLCDLGAGTLGSGMVTDGRCAHHGPDGEEINTMAKLGTFAEHMLLSQDSVVKVDKDIPLVPVALVSCGVATGYGAAVNRAGVSAGDTVVVVGCGGIGSNAIQGARAAG 218
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A7K1ZD24_9ACTN (NDMA-dependent alcohol dehydrogenase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZD24_9ACTN) HSP 1 Score: 224 bits (570), Expect = 2.300e-69 Identity = 114/186 (61.29%), Postives = 139/186 (74.73%), Query Frame = 1
Query: 1 KTLAAGMCHSDEHAHDGTMPVT--------LPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGGFRHHTAA-GEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
KT AAG+CHSDEH G + LP++GGHEG+G VI +GP VTE E+GDH++ SF+P+CGKCRWC+SGQQNLCDLGA + PGM+ G H GE + + KLGTF+EHM+LS DS IKV KD+ AALVSCGV TGYGSAVNRA+V+AGDTVV+VGCGG+G+ A+QGAK AG
Sbjct: 33 KTHAAGLCHSDEHMVTGDLGSADAPGGSSLLPVIGGHEGSGVVIEVGPEVTELEVGDHVAVSFVPACGKCRWCASGQQNLCDLGAGTLGPGMVTDGRSAHRGPDGETINAMAKLGTFAEHMLLSQDSVIKVDKDVPLMAAALVSCGVATGYGSAVNRAEVSAGDTVVVVGCGGIGSNALQGAKAAG 218
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A359F2X5_9ACTN (Alcohol dehydrogenase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F2X5_9ACTN) HSP 1 Score: 203 bits (516), Expect = 1.660e-62 Identity = 104/189 (55.03%), Postives = 129/189 (68.25%), Query Frame = 1
Query: 1 KTLAAGMCHSDEHAHDGTMPVT------------LPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGGFRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
KT AGMCHSDEH G + PL+GGHEG+GEVI +GPGVT +GDH++ SFIP+CGKC +C+ GQQ LCDLGA GM++ G H E + KLGTFSE+M+LS DS +K+ +D+ AALVSCGV TG+GSA+NRA+V AGDTVVI+GCGG+G A+QGA VAG
Sbjct: 33 KTKVAGMCHSDEHMVTGDLSFANEAAIAMGIDPMFPLIGGHEGSGEVIQVGPGVTHLAVGDHVAVSFIPACGKCHYCAKGQQMLCDLGAKAFTKGMISDGRDAHHIGEEAVNTFAKLGTFSEYMLLSEDSVVKIDQDLPFQAAALVSCGVATGFGSAINRAEVKAGDTVVIIGCGGVGMNAVQGAAVAG 221
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A0N9N8I5_9ACTN (Alcohol dehydrogenase n=1 Tax=Gordonia phthalatica TaxID=1136941 RepID=A0A0N9N8I5_9ACTN) HSP 1 Score: 202 bits (514), Expect = 4.750e-61 Identity = 97/175 (55.43%), Postives = 128/175 (73.14%), Query Frame = 1
Query: 7 LAAGMCHSDEHAHDGTMPVTLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGGFRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
+A+G+CHSDEHA G+MP P+VGGHEGAG V +GPGV + + GDH+ C+FIP CGKC WC++GQ NLCD GA +++ M+ G FR A G+D+ L LGTF+E+ + S +KV KDI A LV CGVTTG+GSAVN A V GDTV+++GCGG+G+ A+QGA++AG
Sbjct: 35 VASGLCHSDEHARTGSMPTATPMVGGHEGAGIVEEVGPGVHDLKPGDHVVCAFIPVCGKCHWCATGQSNLCDNGALMLQGTMLDGSFRRR-ARGQDVAALGLLGTFAEYGTVPQQSLVKVDKDIPLNRACLVGCGVTTGWGSAVNSAKVQPGDTVIVIGCGGIGSGALQGARIAG 208
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: A0A385HF35_9NOCA (Alcohol dehydrogenase n=1 Tax=Rhodococcus ruber TaxID=1830 RepID=A0A385HF35_9NOCA) HSP 1 Score: 201 bits (512), Expect = 9.490e-61 Identity = 92/175 (52.57%), Postives = 128/175 (73.14%), Query Frame = 1
Query: 7 LAAGMCHSDEHAHDGTMPVTLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGGFRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
+A G+CHSD+HA G MP+ LP VGGHEGAG + +GPGVT GDH+ CSF+P CG+CRWC++G NLCD+GAH++ M+ G +R A G+++ + LGTF+E+ + +S +K+ D+ A L+ CGVTTG+GSAVN A+V GDTVV++GCGG+G+ AIQGA++AG
Sbjct: 35 VAGGLCHSDDHARTGDMPIALPTVGGHEGAGVIEEVGPGVTSLAPGDHVVCSFLPGCGRCRWCATGHSNLCDMGAHILGGTMLDGTYRRR-ARGQNVGAMSLLGTFAEYGTVHEESVVKIDDDLPLDRAVLLGCGVTTGWGSAVNSAEVQPGDTVVVIGCGGIGSGAIQGARIAG 208
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Match: UPI001EEBA1DC (Zn-dependent alcohol dehydrogenase n=1 Tax=Mycobacterium sp. IDR2000157661 TaxID=2867005 RepID=UPI001EEBA1DC) HSP 1 Score: 201 bits (512), Expect = 1.410e-60 Identity = 100/187 (53.48%), Postives = 128/187 (68.45%), Query Frame = 1
Query: 10 AAGMCHSDEHAHDGTM------------PVTLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIPSCGKCRWCSSGQQNLCDLGAHLMEPGMMAGG-FRHHTAAGEDLTPLLKLGTFSEHMVLSVDSAIKVQKDIAPGPAALVSCGVTTGYGSAVNRADVTAGDTVVIVGCGGLGTAAIQGAKVAG 531
AAG+CHSDEH +G M P P++GGHEGAG V+ +GPGV+EF GDH+ SF+ CG+CRWC+ G + +CD+GA +M PGM G FRHHTA G L L K+G F+EH V+S DS +KV + P AL+SCG+ TG+GSA NRA V AGDTVV++G GG+GT AIQGA++ G
Sbjct: 36 AAGLCHSDEHIRNGDMSASNEVMEAYGLPSMFPMIGGHEGAGTVLDVGPGVSEFAPGDHVVTSFVAVCGRCRWCNCGMEYICDMGAQVMIPGMPTDGTFRHHTADGRRLGHLSKVGAFAEHTVVSTDSVVKVSPHLPLLPMALLSCGIPTGFGSAENRAQVRAGDTVVVIGVGGIGTGAIQGARICG 222 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121440.4410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121440.4410.1 >prot_M-pyrifera_M_contig121440.4410.1 ID=prot_M-pyrifera_M_contig121440.4410.1|Name=mRNA_M-pyrifera_M_contig121440.4410.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp MCHSDEHAHDGTMPVTLPLVGGHEGAGEVIGLGPGVTEFELGDHISCSFIback to top mRNA from alignment at M-pyrifera_M_contig121440:3..533- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121440.4410.1 ID=mRNA_M-pyrifera_M_contig121440.4410.1|Name=mRNA_M-pyrifera_M_contig121440.4410.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=531bp|location=Sequence derived from alignment at M-pyrifera_M_contig121440:3..533- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121440:3..533- >mRNA_M-pyrifera_M_contig121440.4410.1 ID=mRNA_M-pyrifera_M_contig121440.4410.1|Name=mRNA_M-pyrifera_M_contig121440.4410.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig121440:3..533- (Macrocystis pyrifera P11B4 male)back to top |