mRNA_M-pyrifera_M_contig121415.4405.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: A0A7R9WE41_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE41_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.750e-26 Identity = 61/130 (46.92%), Postives = 69/130 (53.08%), Query Frame = 1
Query: 1 FADMTQPFRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
F F R+VEIGRV L+NYGP++GKLC IVDVVDGNR A VDGPV TG SRQ+INF+RLALTDF V I R AR L KA+ +A I EKW
Sbjct: 7 FCVCIMTFTRFVEIGRVALINYGPEQGKLCTIVDVVDGNR-------------------------------------ALVDGPVSLTGTSRQMINFRRLALTDFKVKIGRNARHKALAKAWEKANILEKW 99
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: A0A835YLN7_9STRA (Ribosomal protein L14-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN7_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.340e-24 Identity = 57/123 (46.34%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 22 FRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
F R+VEIGRV L+NYGPD+GKLC I+DVVD N+ A +DGP TGV RQ+I FKRLALTDF V I R AR TL+KAF+EA + KW
Sbjct: 3 FTRFVEIGRVALINYGPDEGKLCTIIDVVDHNK-------------------------------------ALIDGPEELTGVKRQMIPFKRLALTDFKVKILRNARQGTLKKAFAEADVLAKW 88
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: A0A7S0FIA2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIA2_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 5.980e-22 Identity = 51/126 (40.48%), Postives = 68/126 (53.97%), Query Frame = 1
Query: 13 TQPFRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
T F RYVE+GR+ LVNYGP+ GKL I+DVVD N+ +DGP TGV RQ+I ++R+ALT+ TV I+R AR TL+KA+++A+IE KW
Sbjct: 2 TMSFSRYVEVGRIVLVNYGPESGKLATIIDVVDQNK-------------------------------------CLIDGPEDITGVRRQVIPYRRIALTNLTVKIARNARAKTLKKAWADAEIESKW 90
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: A0A813C166_9DINO (RPL14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C166_9DINO) HSP 1 Score: 92.8 bits (229), Expect = 1.080e-21 Identity = 53/120 (44.17%), Postives = 63/120 (52.50%), Query Frame = 1
Query: 31 YVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
YVEIGRV L+ YGPD+GKLC I+DVVD NRV VDGP TGV RQ+IN +R+ALTDF V+I+R AR+ L K + A IE KW
Sbjct: 1 YVEIGRVALITYGPDEGKLCTIIDVVDQNRV-------------------------------------LVDGPENLTGVRRQMINLRRIALTDFVVNIARNARIKKLNKEWKAADIENKW 83
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: K3WFP3_GLOUD (Ribosomal_L14e domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFP3_GLOUD) HSP 1 Score: 92.4 bits (228), Expect = 1.690e-21 Identity = 52/123 (42.28%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 22 FRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
F R+V IGRV L+NYGPD GK+ I+DVVD N+ A +DGP TGV+RQ+I+FKRLALTD T+ I R AR TL+KA + K EKW
Sbjct: 3 FTRFVSIGRVALINYGPDSGKIATIIDVVDENK-------------------------------------ALIDGPFSVTGVNRQVISFKRLALTDITIKIPRQAREKTLKKALATEKTVEKW 88
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: A0A8J2SUJ1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUJ1_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.740e-21 Identity = 50/127 (39.37%), Postives = 65/127 (51.18%), Query Frame = 1
Query: 10 MTQPFRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
+ F R+VE+GR+ LVNYGPD GKL I+D+VDGN+ +DGPV TGV+RQ+I FKRLALTD + + + AR TL KA+ K+EE W
Sbjct: 3 LNSAFSRFVEVGRIVLVNYGPDAGKLATIIDIVDGNK-------------------------------------CMIDGPVPKTGVARQVIPFKRLALTDIVIEVPKSARQKTLVKAWDAEKVEETW 92
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: F0YD47_AURAN (Ribosomal_L14e domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD47_AURAN) HSP 1 Score: 92.0 bits (227), Expect = 2.150e-21 Identity = 51/123 (41.46%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 22 FRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
F R+VE+GRV L+NYGPD+GKL I+D+VDGN+ VDGP TGV+RQ+I FKR+ALTD V I + AR TL KA+ EA + KW
Sbjct: 1 FSRFVEVGRVVLINYGPDEGKLATIIDIVDGNK-------------------------------------CLVDGPATKTGVARQVIPFKRVALTDIVVKIPKNARQKTLNKAWDEADVLAKW 86
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: A0A7S3HF57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF57_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.240e-21 Identity = 55/124 (44.35%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 19 PFRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
PF R+VEIGRV LVNYGPD GKLCVI+DV+D NRV +V GP TGV R I +RLALTDF V +SRGAR L KA+ + +E KW
Sbjct: 6 PFSRFVEIGRVALVNYGPDLGKLCVILDVLDQNRV-------------------------------------FVHGPT--TGVPRHTIPIRRLALTDFVVKVSRGARTKALTKAWKTSGVEAKW 90
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: A0A8K1CDT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDT4_PYTOL) HSP 1 Score: 92.0 bits (227), Expect = 2.400e-21 Identity = 53/123 (43.09%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 22 FRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
F R+V+IGRV L+NYGPD GK+ I+DVVD N+ A +DGP TGV+RQ+I+FKRLALTD TV I R AR TL+KA A EKW
Sbjct: 3 FSRFVQIGRVALINYGPDSGKIATIIDVVDENK-------------------------------------ALIDGPFSVTGVNRQVISFKRLALTDLTVKIPRQAREKTLKKALEAAGTLEKW 88
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Match: A0A7S1XZK1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1XZK1_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 6.620e-21 Identity = 48/123 (39.02%), Postives = 65/123 (52.85%), Query Frame = 1
Query: 22 FRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAHRAPRSPAPPHSSRWARQEEYCAHAYVDGPVCCTGVSRQIINFKRLALTDFTVSISRGARLSTLRKAFSEAKIEEKW 390
F+RYVE+GRV L+NYGPDKGKL I+D+VD N+ +DGP+ TGVSRQ+I + R+ALTD T + R AR L+KA+++ +I KW
Sbjct: 4 FKRYVEVGRVVLINYGPDKGKLATIIDIVDQNK-------------------------------------CLIDGPMDITGVSRQVIPYSRIALTDLTCKVQRSARNKALKKAWTDGEIMSKW 89 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121415.4405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121415.4405.1 >prot_M-pyrifera_M_contig121415.4405.1 ID=prot_M-pyrifera_M_contig121415.4405.1|Name=mRNA_M-pyrifera_M_contig121415.4405.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp MTQPFRRYVEIGRVCLVNYGPDKGKLCVIVDVVDGNRVRAFPLSHRIQDAback to top mRNA from alignment at M-pyrifera_M_contig121415:102..525+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121415.4405.1 ID=mRNA_M-pyrifera_M_contig121415.4405.1|Name=mRNA_M-pyrifera_M_contig121415.4405.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=424bp|location=Sequence derived from alignment at M-pyrifera_M_contig121415:102..525+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121415:102..525+ >mRNA_M-pyrifera_M_contig121415.4405.1 ID=mRNA_M-pyrifera_M_contig121415.4405.1|Name=mRNA_M-pyrifera_M_contig121415.4405.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig121415:102..525+ (Macrocystis pyrifera P11B4 male)back to top |