mRNA_M-pyrifera_M_contig121411.4403.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig121411.4403.1
Unique NamemRNA_M-pyrifera_M_contig121411.4403.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: V9D5A2_9EURO (G-patch domain-containing protein n=2 Tax=Cladophialophora carrionii TaxID=86049 RepID=V9D5A2_9EURO)

HSP 1 Score: 97.4 bits (241), Expect = 5.680e-21
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAA----APRATAEQFMDDEDFEEAQA--TLRAATPFQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARAR 366
              DE+GR+RLHGA+ GG +AGY+NTVGS EGWAPS F SSR  RA     AP+   E FMD+ED  EA+   TL  +  F                  F  S GE  GLRLL+RMGWR+G+G+G R R
Sbjct:   49 ATDERGRKRLHGAFTGGFSAGYYNTVGSKEGWAPSTFVSSRQNRAKDARKAPQQRPEDFMDEEDIREAEESRTLDTSKDFAGFGTEHDSVRKTAAIDIFRPS-GETVGLRLLKRMGWREGTGIGPRVR 175          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: UPI001DE9C0AB (G patch domain-containing protein 1 n=1 Tax=Passalora fulva TaxID=5499 RepID=UPI001DE9C0AB)

HSP 1 Score: 97.1 bits (240), Expect = 7.720e-21
Identity = 63/134 (47.01%), Postives = 77/134 (57.46%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAAAPRATAEQ----FMDDEDF-EEAQA-TLRAATPFQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARARSRIARD 384
            V D++GR+RLHGA+ GG +AGY NTVGS EGWAPS F SSR  RA  P+   +Q    FMDDED  E+A+A TL     F                     S GE  G++LL+RMGWRQG G+G + R R   D
Sbjct:   51 VTDKRGRKRLHGAFTGGFSAGYFNTVGSKEGWAPSTFVSSRANRAKTPQDGKQQRPEDFMDDEDLAEQAEAQTLETQNTFAGLGSTASDGAVRGMFSDLFKSTGETKGVKLLQRMGWRQGQGIGPKVRRRAQGD 184          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: A0A7J6IMU0_COLFN (G patch domain-containing protein 1 n=1 Tax=Colletotrichum fructicola (strain Nara gc5) TaxID=1213859 RepID=A0A7J6IMU0_COLFN)

HSP 1 Score: 96.3 bits (238), Expect = 1.420e-20
Identity = 63/133 (47.37%), Postives = 76/133 (57.14%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAA----APRATAEQFMDDEDFEEAQAT--LRAATPFQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARARSRIAR 381
            V D++GRRRLHGA+ GG +AGY NTVGS EGW PS F SSR AR      AP    E +MDDED  +A AT  +R   PF                 S     G+  GL+LLR+MGW+ G G+G R R R+AR
Sbjct:   50 VRDDKGRRRLHGAFTGGWSAGYFNTVGSKEGWTPSTFVSSRTARRKDDPRAPDQRPEDYMDDEDLADAAATKEIRTTDPFGALGAPSPGQRLSGGLASLMRIQGDTIGLKLLRKMGWKDGQGIGPRIR-RVAR 181          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: W9VTC7_9EURO (G-patch domain-containing protein n=1 Tax=Cladophialophora yegresii CBS 114405 TaxID=1182544 RepID=W9VTC7_9EURO)

HSP 1 Score: 95.5 bits (236), Expect = 2.680e-20
Identity = 64/128 (50.00%), Postives = 76/128 (59.38%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAA----APRATAEQFMDDEDFEEAQA--TLRAATPFQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARAR 366
            V DE+GR+RLHGA+ GG  AGY+NTVGS EGWAPSAF SSR  R      A +   E FMD+ED  EA+   TL A+T F                  F  S GE  G RLL+RMGWR+G+G+G R R
Sbjct:   49 VTDERGRKRLHGAFTGGFNAGYYNTVGSKEGWAPSAFVSSRQNRTKDAQKALQQRPEDFMDEEDIREAEESRTLDASTEFAGFGTEHDSVRKIAAIDIFRPS-GETVGSRLLKRMGWREGNGIGPRVR 175          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: A0A2P6V4I6_9CHLO (TATA-box binding-interacting TOUGH isoform A n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V4I6_9CHLO)

HSP 1 Score: 95.1 bits (235), Expect = 3.790e-20
Identity = 58/137 (42.34%), Postives = 77/137 (56.20%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAAAPRATAEQFMDDEDFEE-------------------AQATLRAATPFQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVG 354
            V DEQGRRR HGA+ GG++AGY+NTVGSAEGW PS FRSSR +RAA  ++  EQF+D+++ E+                   A+   RAA                  P    A + +  G+RLL++MGWRQG G+G
Sbjct:   48 VTDEQGRRRFHGAFTGGYSAGYYNTVGSAEGWQPSTFRSSRDSRAAVQQSV-EQFLDEDELEDLRRTNLQTTEQYDTFGSTAAELARRAAAD---AAAERPSAIPGLLPEEMVAPVADSVGIRLLQKMGWRQGKGIG 180          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: A0A0D1Z082_EXOME (G-patch domain-containing protein n=2 Tax=Exophiala mesophila TaxID=212818 RepID=A0A0D1Z082_EXOME)

HSP 1 Score: 93.6 bits (231), Expect = 1.260e-19
Identity = 61/128 (47.66%), Postives = 73/128 (57.03%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAAA----PRATAEQFMDDEDFEEAQATLRAATP--FQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARAR 366
            V DE+GR+RLHGA++GG +AGY NTVGS EGW PS F SSR +RA      P+   E FMD+ED +EA    R  T   F                  F  S  +  G+RLL RMGWRQG G+GAR R
Sbjct:   49 VTDERGRKRLHGAFKGGFSAGYFNTVGSKEGWTPSTFISSRQSRAKGGQSFPQQKPEDFMDEEDLDEADEHRRLETSGDFAGFGTAQDPTRRDAMVELFCRSQ-DTIGVRLLGRMGWRQGQGIGARVR 175          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: A0A4V6WLB4_9PEZI (G-patch domain-containing protein n=1 Tax=Friedmanniomyces simplex TaxID=329884 RepID=A0A4V6WLB4_9PEZI)

HSP 1 Score: 93.6 bits (231), Expect = 1.270e-19
Identity = 69/135 (51.11%), Postives = 81/135 (60.00%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAAAPRAT-----AEQFMDDEDFEEAQATLRAATP--FQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARARSRIARD 384
            V DE+GR+RLHGA+ GG +AGY NTVGS EGW PSAF SSR  RA   +A      AE FMDDED  E   + +  T   F     XXXXXXX         + GE  G++LL+RMGWRQG GVG R + R   D
Sbjct:   50 VTDERGRKRLHGAFTGGFSAGYFNTVGSKEGWTPSAFVSSRANRAKDGKAQQQGQRAEDFMDDEDLAEQAESQKLETQGGFAGLGSXXXXXXXKGMFEDLFRANGETMGVKLLQRMGWRQGQGVGPRVKRRAKGD 184          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: A0A7H8QR91_9EURO (Uncharacterized protein n=1 Tax=Talaromyces rugulosus TaxID=121627 RepID=A0A7H8QR91_9EURO)

HSP 1 Score: 93.6 bits (231), Expect = 1.310e-19
Identity = 57/125 (45.60%), Postives = 75/125 (60.00%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAA-APRATAEQFMDDEDFEEAQAT--LRAATPFQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARAR 366
            V DE+GR+RLHGA+ GG++AGY NTVGS EGWAPS F SSR  RAA A +   E FMD+ED  EA+ +  L  +  F                     + GE  G++LL++MGWR+G G+G + R
Sbjct:   49 VTDERGRKRLHGAFTGGYSAGYFNTVGSKEGWAPSTFISSRSNRAAKAQQQQVEDFMDEEDLREAEESKQLETSGDFAAFGSTQSYLTGRGGIMDLFKAGGETMGVKLLKKMGWREGQGIGPKVR 173          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: D5GC98_TUBMM (G-patch domain-containing protein n=5 Tax=Tuberaceae TaxID=40289 RepID=D5GC98_TUBMM)

HSP 1 Score: 93.2 bits (230), Expect = 1.710e-19
Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAAAPRATAEQFMDDEDFEEAQAT--LRAATPFQ----PXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARARSRIARD 384
            V DE+GR+RLHGA+ GG +AGY NTVGS EGW P+ F+SSRGARA A +A  E FMD+ED +EA     +  A+ F                       + ++ +  G +LL++MGW++G G+G + R +   D
Sbjct:   53 VTDERGRKRLHGAFTGGFSAGYFNTVGSKEGWTPATFKSSRGARAKAAQARPEDFMDEEDLKEAAEAQVVETASGFSGIGSTEEELGRRARQVTLMDLLTPAVQDTMGAKLLKKMGWKEGQGIGPKVRRKAVID 186          
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Match: A0A3N4M2T8_9PEZI (DUF1604-domain-containing protein n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4M2T8_9PEZI)

HSP 1 Score: 93.2 bits (230), Expect = 1.720e-19
Identity = 57/127 (44.88%), Postives = 73/127 (57.48%), Query Frame = 1
Query:    1 VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAAAPRATAEQFMDDEDF-----EEAQATLRAATPFQPXXXXXXXXXXXXFPPSFSASMGEGAGLRLLRRMGWRQGSGVGARAR 366
            V DE+GR+RLHGA+ GG +AGY NTVGS EGWAPSAF+SSR ARA A +   E FMD+EDF     E+   T R  T +                        E  G++LL++MGW+ G G+G + R
Sbjct:   45 VTDERGRKRLHGAFTGGFSAGYFNTVGSKEGWAPSAFKSSRDARAKAVQVRPEDFMDEEDFAAVAEEKVLETNRNFTGWGSTADELSSKAKLTVMDLLKPPPEEMMGVKLLKKMGWKDGQGIGPKVR 171          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121411.4403.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
V9D5A2_9EURO5.680e-2149.22G-patch domain-containing protein n=2 Tax=Cladophi... [more]
UPI001DE9C0AB7.720e-2147.01G patch domain-containing protein 1 n=1 Tax=Passal... [more]
A0A7J6IMU0_COLFN1.420e-2047.37G patch domain-containing protein 1 n=1 Tax=Collet... [more]
W9VTC7_9EURO2.680e-2050.00G-patch domain-containing protein n=1 Tax=Cladophi... [more]
A0A2P6V4I6_9CHLO3.790e-2042.34TATA-box binding-interacting TOUGH isoform A n=2 T... [more]
A0A0D1Z082_EXOME1.260e-1947.66G-patch domain-containing protein n=2 Tax=Exophial... [more]
A0A4V6WLB4_9PEZI1.270e-1951.11G-patch domain-containing protein n=1 Tax=Friedman... [more]
A0A7H8QR91_9EURO1.310e-1945.60Uncharacterized protein n=1 Tax=Talaromyces rugulo... [more]
D5GC98_TUBMM1.710e-1941.04G-patch domain-containing protein n=5 Tax=Tuberace... [more]
A0A3N4M2T8_9PEZI1.720e-1944.88DUF1604-domain-containing protein n=1 Tax=Terfezia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121411contigM-pyrifera_M_contig121411:11..406 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score100.9
Seed ortholog evalue4.7e-19
Seed eggNOG ortholog86049.XP_008728667.1
KEGG koko:K13123
KEGG ModuleM00355
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0045292,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.Protein of unknown function (DUF1604)
EggNOG OGs20DGT@147545,38DVS@33154,3MUG0@451870,3NUN1@4751,3QN5Z@4890,KOG2138@1,KOG2138@2759
COG Functional cat.A
Best tax levelChaetothyriomycetidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko03041
Exons1
Model size396
Cds size396
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815733.240178-CDS-M-pyrifera_M_contig121411:10..4061622815733.240178-CDS-M-pyrifera_M_contig121411:10..406Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig121411 11..406 -
1692277543.8060334-CDS-M-pyrifera_M_contig121411:10..4061692277543.8060334-CDS-M-pyrifera_M_contig121411:10..406Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig121411 11..406 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121411.4403.1prot_M-pyrifera_M_contig121411.4403.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig121411 11..406 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig121411.4403.1

>prot_M-pyrifera_M_contig121411.4403.1 ID=prot_M-pyrifera_M_contig121411.4403.1|Name=mRNA_M-pyrifera_M_contig121411.4403.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
VVDEQGRRRLHGAWRGGHAAGYHNTVGSAEGWAPSAFRSSRGARAAAPRA
TAEQFMDDEDFEEAQATLRAATPFQPSPSQPSPSQPSSFPPSFSASMGEG
AGLRLLRRMGWRQGSGVGARARSRIARDAAHK
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mRNA from alignment at M-pyrifera_M_contig121411:11..406-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig121411.4403.1 ID=mRNA_M-pyrifera_M_contig121411.4403.1|Name=mRNA_M-pyrifera_M_contig121411.4403.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig121411:11..406- (Macrocystis pyrifera P11B4 male)
GTGGTGGACGAGCAGGGCAGGCGGCGGCTGCACGGGGCCTGGCGGGGGGG CCACGCCGCCGGCTACCACAACACCGTGGGCAGCGCAGAGGGCTGGGCGC CCTCCGCATTCCGCTCCAGCAGAGGCGCGCGCGCCGCCGCCCCGCGCGCC ACCGCAGAGCAATTCATGGACGACGAAGACTTTGAGGAGGCTCAGGCGAC CCTGCGAGCCGCCACGCCCTTCCAGCCCTCGCCCTCGCAGCCTTCGCCCT CGCAGCCCTCCTCCTTCCCCCCCTCTTTCTCTGCGTCTATGGGGGAGGGC GCGGGGCTGCGGCTGCTGCGGCGCATGGGTTGGCGCCAGGGCAGTGGAGT GGGGGCCCGTGCACGCTCCAGAATCGCTCGTGACGCCGCTCACAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig121411:11..406-

>mRNA_M-pyrifera_M_contig121411.4403.1 ID=mRNA_M-pyrifera_M_contig121411.4403.1|Name=mRNA_M-pyrifera_M_contig121411.4403.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig121411:11..406- (Macrocystis pyrifera P11B4 male)
GTGGTGGACGAGCAGGGCAGGCGGCGGCTGCACGGGGCCTGGCGGGGGGG
CCACGCCGCCGGCTACCACAACACCGTGGGCAGCGCAGAGGGCTGGGCGC
CCTCCGCATTCCGCTCCAGCAGAGGCGCGCGCGCCGCCGCCCCGCGCGCC
ACCGCAGAGCAATTCATGGACGACGAAGACTTTGAGGAGGCTCAGGCGAC
CCTGCGAGCCGCCACGCCCTTCCAGCCCTCGCCCTCGCAGCCTTCGCCCT
CGCAGCCCTCCTCCTTCCCCCCCTCTTTCTCTGCGTCTATGGGGGAGGGC
GCGGGGCTGCGGCTGCTGCGGCGCATGGGTTGGCGCCAGGGCAGTGGAGT
GGGGGCCCGTGCACGCTCCAGAATCGCTCGTGACGCCGCTCACAAGGTGG
TGGACGAGCAGGGCAGGCGGCGGCTGCACGGGGCCTGGCGGGGGGGCCAC
GCCGCCGGCTACCACAACACCGTGGGCAGCGCAGAGGGCTGGGCGCCCTC
CGCATTCCGCTCCAGCAGAGGCGCGCGCGCCGCCGCCCCGCGCGCCACCG
CAGAGCAATTCATGGACGACGAAGACTTTGAGGAGGCTCAGGCGACCCTG
CGAGCCGCCACGCCCTTCCAGCCCTCGCCCTCGCAGCCTTCGCCCTCGCA
GCCCTCCTCCTTCCCCCCCTCTTTCTCTGCGTCTATGGGGGAGGGCGCGG
GGCTGCGGCTGCTGCGGCGCATGGGTTGGCGCCAGGGCAGTGGAGTGGGG
GCCCGTGCACGCTCCAGAATCGCTCGTGACGCCGCTCACAAG
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