mRNA_M-pyrifera_M_contig121391.4398.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig121391.4398.1
Unique NamemRNA_M-pyrifera_M_contig121391.4398.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: A0A7S2RK91_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK91_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.080e-12
Identity = 41/113 (36.28%), Postives = 63/113 (55.75%), Query Frame = 1 
Query:   22 PLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQLARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPEQQRQLAMLDVVETLRSSG 360
            P C V+ V K L  +  E +  A GA   A A     + AR ++ L+R ++PQ H + ++ +PR AAL+HNDC++L+H    L+ +Y   RL     +   ++DVV  LRS G
Sbjct:  529 PTCHVTTVAKDLVLMAHEAMHKACGASSLAAATLY--RTARELMDLFRAVIPQRHSETLQSLPRSAALFHNDCLYLAHEALTLAHQYR-GRLPAPLNKTATLVDVVPALRSLG 638
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: D8LHV9_ECTSI (Putative: silimar to centromere/kinetochore protein zw10 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV9_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.460e-11
Identity = 39/113 (34.51%), Postives = 59/113 (52.21%), Query Frame = 1 
Query:   13 FHFPLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQLARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPEQQRQLAMLDVVETLR 351
            F    C+VS V  SL  L+  TLA A   +      +E  + AR M+ L+R +VP  H   ++ VPR+AA++ NDC++L+H +  L   +  H L P   +   M+D V   R
Sbjct:  504 FRLEACQVSTVASSLVALVRATLAEACSDQIPLHCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFR-HGLPPPANQTATMIDTVHLFR 615
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: A0A836CAB9_9STRA (Centromere/kinetochore Zw10-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB9_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 9.550e-11
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 1 
Query:   55 LTELLDETLATAFGAEGAAEALEEAAQL-----------ARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPEQQRQLAMLDVVETLR 351
            +T+++ + LA A   E  AEA EE AQ+           AR ++ L+R +VP  HG+ ++ VPR+AAL+HNDC FL+H  + +  RY   RL P       M+D+++  R
Sbjct:  811 VTQVVQQVLAKAH--EALAEACEEGAQVPPLIARELFRTARDVLELFRAVVPARHGEQMQNVPRLAALFHNDCAFLAHHAATIGHRYR-QRLPPPVNSVATMVDMIQRQR 917
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: UPI0006C9461F (centromere/kinetochore protein zw10 homolog n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C9461F)

HSP 1 Score: 66.6 bits (161), Expect = 2.340e-10
Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 1 
Query:    1 SRPLFHFPLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQ----LARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPEQQRQLAMLDVVETLRSSGT 363
            S+  F FP C++S   + + +LL E L      E A + L++        +R ++ ++  LVP+ H   +E +P+  AL+HN+CI+LSH + +LS +Y        Q       D    LR  GT
Sbjct:  423 SKNTFQFPECQISKSAQEIVDLLHEIL------EDACQCLDKYVYRLFYTSRNVIEMYAALVPEIHKSFLETIPQQVALFHNNCIYLSHHLLLLSSKYKYRIPLQSQNFNFVYTDQSVLLRQVGT 541
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: UPI000C6F7167 (centromere/kinetochore protein zw10 homolog n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI000C6F7167)

HSP 1 Score: 63.9 bits (154), Expect = 2.060e-9
Identity = 37/117 (31.62%), Postives = 63/117 (53.85%), Query Frame = 1 
Query:   13 FHFPLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQLARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPE-QQRQLAMLDVVETLRSSG 360
            FHFP C++S   + +  L++E L    G +   + L +     R +  ++  LVP+ H   +E +P+  AL+HN+C++LSH +  L+ +Y   ++TP  Q+  L   D V  LR  G
Sbjct:  429 FHFPKCQISKSAQEIICLVEEILEE--GCQNPEKYLPKLFYTTRNIFEMYANLVPEIHKSYLETIPQQVALFHNNCLYLSHNLLTLAFKYQ-KKITPSCQEFSLIYADQVLLLREVG 542
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: A0A7S2MDJ5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDJ5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 6.940e-9
Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 1 
Query:   22 PLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQLARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPEQQRQLAMLDVVETLRSSG 360
            P C V+ V   +  L    LA A  ++    A     + AR ++ L+R +VPQ H   +  +PR+AAL+HNDC+FL+H    L+ RY     TP   +   M+D+V  LR+ G
Sbjct:  423 PRCHVTQVAVDVLALTRSALAKACDSKDILPAAT-LYRTAREIMDLFRAVVPQHHATALASLPRLAALFHNDCLFLAHAALTLAHRYRSRLPTP-LNKCATMVDMVPPLRALG 533
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: B3P933_DROER (Uncharacterized protein n=1 Tax=Drosophila erecta TaxID=7220 RepID=B3P933_DROER)

HSP 1 Score: 60.8 bits (146), Expect = 2.470e-8
Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 1 
Query:   13 FHFPLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQLARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWIS 264
            F FP C +S   +   +L+D  L       G  E +E  A +   M+H +   VP+ H +L+E +P+ A L+HN+CIFL+HW++
Sbjct:  438 FLFPRCMISKSVQDYVKLMDRILRQPTDKSGDKE-VEPTAGIIPVMLHTYIDEVPKVHRKLLESIPQQAVLFHNNCIFLTHWVA 520
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: A0A6P8I2Z6_ACTTE (centromere/kinetochore protein zw10 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I2Z6_ACTTE)

HSP 1 Score: 60.1 bits (144), Expect = 4.620e-8
Identity = 37/119 (31.09%), Postives = 59/119 (49.58%), Query Frame = 1 
Query:   13 FHFPLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQL---ARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPEQQRQLAMLDVVETLRSSG 360
            F  P C +S  TK L  L  +TL      E      + A QL    R M  L+  +VP  H + +  +P++AAL+HN+C+++SH +  +  ++      P  Q     +D+V T+RS G
Sbjct:  475 FQLPSCRISESTKELMNLAYKTLL-----EATKSTPQSAIQLFYTVRNMFELFCNVVPTYHKESLTNLPQLAALHHNNCMYISHLLLTMGHQFKSQLPEPLNQGAATFMDLVPTIRSLG 588
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: A0A0B7BFU7_9EUPU (Uncharacterized protein n=2 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7BFU7_9EUPU)

HSP 1 Score: 59.7 bits (143), Expect = 6.310e-8
Identity = 36/115 (31.30%), Postives = 60/115 (52.17%), Query Frame = 1 
Query:   16 HFPLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQLARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPEQQRQLAMLDVVETLRSSG 360
              P C +S   ++L  L  ETL  A   E + E   +     R M  L+  +VP  H Q  E  P++AAL+HN+C+F++H +  LS ++     +P+ +     +D++E +R SG
Sbjct:  486 RMPKCRISENIQTLMMLAYETLCEAT--ESSPECATQMFYAVRNMFELFYHVVPTYHSQNFEAFPQIAALHHNNCMFIAHHLLTLSHQFAPKLPSPDNK---TFVDLIEKIRRSG 595
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BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Match: UPI000A2A5766 (centromere/kinetochore protein zw10 homolog isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A5766)

HSP 1 Score: 59.3 bits (142), Expect = 8.590e-8
Identity = 37/119 (31.09%), Postives = 58/119 (48.74%), Query Frame = 1 
Query:   13 FHFPLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQL---ARRMVHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLTPEQQRQLAMLDVVETLRSSG 360
            F  P C +S  TK L  L   TL      E      + A QL    R M  L+  +VP  H + +  +P++AAL+HN+C+++SH +  +  ++  H   P  Q     +D+V  +RS G
Sbjct:  468 FQLPKCCISESTKKLVNLAYNTLL-----EATKSPTQSAIQLFYTVRNMFELYCNVVPTYHQESLATLPQLAALHHNNCMYISHLLLTMGHQFKSHLPEPLNQGAATFIDLVPIVRSLG 581
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121391.4398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2RK91_9STRA3.080e-1236.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LHV9_ECTSI1.460e-1134.51Putative: silimar to centromere/kinetochore protei... [more]
A0A836CAB9_9STRA9.550e-1137.27Centromere/kinetochore Zw10-domain-containing prot... [more]
UPI0006C9461F2.340e-1030.40centromere/kinetochore protein zw10 homolog n=1 Ta... [more]
UPI000C6F71672.060e-931.62centromere/kinetochore protein zw10 homolog n=1 Ta... [more]
A0A7S2MDJ5_9STRA6.940e-935.40Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
B3P933_DROER2.470e-835.71Uncharacterized protein n=1 Tax=Drosophila erecta ... [more]
A0A6P8I2Z6_ACTTE4.620e-831.09centromere/kinetochore protein zw10 homolog n=1 Ta... [more]
A0A0B7BFU7_9EUPU6.310e-831.30Uncharacterized protein n=2 Tax=Arion vulgaris Tax... [more]
UPI000A2A57668.590e-831.09centromere/kinetochore protein zw10 homolog isofor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121391contigM-pyrifera_M_contig121391:69..431 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score69.7
Seed ortholog evalue1.1e-09
Seed eggNOG ortholog2880.D8LHV9
Preferred nameZW10
KEGG koko:K10481,ko:K11578,ko:K14809,ko:K21122
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000075,GO:0000132,GO:0000226,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000779,GO:0000793,GO:0000819,GO:0000910,GO:0000922,GO:0000940,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005783,GO:0005794,GO:0005795,GO:0005819,GO:0005828,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0006810,GO:0006888,GO:0006890,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007059,GO:0007060,GO:0007080,GO:0007088,GO:0007093,GO:0007094,GO:0007096,GO:0007107,GO:0007112,GO:0007140,GO:0007163,GO:0007276,GO:0007346,GO:0008104,GO:0008150,GO:0009987,GO:0010256,GO:0010324,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0012505,GO:0015630,GO:0016043,GO:0016192,GO:0017016,GO:0017137,GO:0019237,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0030010,GO:0030071,GO:0031267,GO:0031577,GO:0031984,GO:0032501,GO:0032504,GO:0032506,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033206,GO:0033365,GO:0034501,GO:0034502,GO:0034613,GO:0036063,GO:0036090,GO:0040001,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043565,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044430,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045132,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0046907,GO:0048193,GO:0048232,GO:0048285,GO:0048519,GO:0048523,GO:0048609,GO:0050000,GO:0050789,GO:0050794,GO:0051020,GO:0051128,GO:0051129,GO:0051179,GO:0051233,GO:0051234,GO:0051276,GO:0051293,GO:0051294,GO:0051301,GO:0051303,GO:0051310,GO:0051321,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051704,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0061024,GO:0061640,GO:0065003,GO:0065007,GO:0070727,GO:0070939,GO:0071173,GO:0071174,GO:0071459,GO:0071840,GO:0097159,GO:0098687,GO:0098791,GO:0098813,GO:0099023,GO:0099024,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:0140014,GO:1901363,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902850,GO:1903046,GO:1903047,GO:1905818,GO:1905819,GO:1990423,GO:1990837,GO:2000816,GO:2001251
EggNOG free text desc.spindle assembly checkpoint
EggNOG OGsKOG2163@1,KOG2163@2759
EC3.4.19.12,3.6.4.13
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03009,ko03036,ko04121,ko04131
Exons1
Model size363
Cds size363
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815732.9594889-CDS-M-pyrifera_M_contig121391:68..4311622815732.9594889-CDS-M-pyrifera_M_contig121391:68..431Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig121391 69..431 -
1692277543.6512773-CDS-M-pyrifera_M_contig121391:68..4311692277543.6512773-CDS-M-pyrifera_M_contig121391:68..431Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig121391 69..431 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121391.4398.1prot_M-pyrifera_M_contig121391.4398.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig121391 69..431 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig121391.4398.1

>prot_M-pyrifera_M_contig121391.4398.1 ID=prot_M-pyrifera_M_contig121391.4398.1|Name=mRNA_M-pyrifera_M_contig121391.4398.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
SRPLFHFPLCEVSVVTKSLTELLDETLATAFGAEGAAEALEEAAQLARRM
VHLWRVLVPQTHGQLIEQVPRVAALYHNDCIFLSHWISMLSLRYPLHRLT
PEQQRQLAMLDVVETLRSSGT
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mRNA from alignment at M-pyrifera_M_contig121391:69..431-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig121391.4398.1 ID=mRNA_M-pyrifera_M_contig121391.4398.1|Name=mRNA_M-pyrifera_M_contig121391.4398.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=363bp|location=Sequence derived from alignment at M-pyrifera_M_contig121391:69..431- (Macrocystis pyrifera P11B4 male)
AGCAGGCCCCTCTTCCACTTCCCCCTCTGTGAGGTGTCTGTGGTGACGAA
GAGCCTCACAGAGCTCCTGGACGAGACCCTGGCGACGGCGTTCGGGGCCG
AGGGCGCCGCAGAGGCCTTGGAGGAGGCGGCGCAGCTCGCGAGGAGGATG
GTCCACCTCTGGAGGGTCCTCGTGCCGCAGACGCACGGCCAGCTCATTGA
GCAGGTGCCCAGGGTGGCCGCGCTCTACCACAACGACTGCATCTTCCTCA
GCCACTGGATCAGCATGCTGTCCCTCCGCTATCCTCTGCACCGCCTGACC
CCCGAGCAGCAGCGCCAGCTGGCGATGCTCGACGTCGTTGAGACCCTCCG
CAGCAGCGGCACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig121391:69..431-

>mRNA_M-pyrifera_M_contig121391.4398.1 ID=mRNA_M-pyrifera_M_contig121391.4398.1|Name=mRNA_M-pyrifera_M_contig121391.4398.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig121391:69..431- (Macrocystis pyrifera P11B4 male)
AGCAGGCCCCTCTTCCACTTCCCCCTCTGTGAGGTGTCTGTGGTGACGAA
GAGCCTCACAGAGCTCCTGGACGAGACCCTGGCGACGGCGTTCGGGGCCG
AGGGCGCCGCAGAGGCCTTGGAGGAGGCGGCGCAGCTCGCGAGGAGGATG
GTCCACCTCTGGAGGGTCCTCGTGCCGCAGACGCACGGCCAGCTCATTGA
GCAGGTGCCCAGGGTGGCCGCGCTCTACCACAACGACTGCATCTTCCTCA
GCCACTGGATCAGCATGCTGTCCCTCCGCTATCCTCTGCACCGCCTGACC
CCCGAGCAGCAGCGCCAGCTGGCGATGCTCGACGTCGTTGAGACCCTCCG
CAGCAGCGGCACCAGCAGGCCCCTCTTCCACTTCCCCCTCTGTGAGGTGT
CTGTGGTGACGAAGAGCCTCACAGAGCTCCTGGACGAGACCCTGGCGACG
GCGTTCGGGGCCGAGGGCGCCGCAGAGGCCTTGGAGGAGGCGGCGCAGCT
CGCGAGGAGGATGGTCCACCTCTGGAGGGTCCTCGTGCCGCAGACGCACG
GCCAGCTCATTGAGCAGGTGCCCAGGGTGGCCGCGCTCTACCACAACGAC
TGCATCTTCCTCAGCCACTGGATCAGCATGCTGTCCCTCCGCTATCCTCT
GCACCGCCTGACCCCCGAGCAGCAGCGCCAGCTGGCGATGCTCGACGTCG
TTGAGACCCTCCGCAGCAGCGGCACC
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