mRNA_M-pyrifera_M_contig121184.4366.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: UPI001ADEDEA5 (DUF58 domain-containing protein n=3 Tax=Marinobacter salsuginis TaxID=418719 RepID=UPI001ADEDEA5) HSP 1 Score: 335 bits (860), Expect = 1.000e-113 Identity = 164/178 (92.13%), Postives = 175/178 (98.31%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
NRRIPRSD+Q+FSQKNIFILPTGAGLVFGLLLVI+LLTGINYQNSLIYLSTF+LGAVFVGAMHQTHRNLSGLELTL+QPGEGFAGDDIPFR RLKAGRDDAIA+LLSCEESGLAPVHVHSG +QDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSW+RPVSAG+VFPRP+ AP+A
Sbjct: 14 NRRIPRSDLQTFSQKNIFILPTGAGLVFGLLLVIMLLTGINYQNSLIYLSTFILGAVFVGAMHQTHRNLSGLELTLIQPGEGFAGDDIPFRLRLKAGRDDAIAVLLSCEESGLAPVHVHSGEAQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWLRPVSAGVVFPRPIAAPDA 191
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: A0A0K1UGD5_9GAMM (DUF58 domain-containing protein n=23 Tax=Marinobacter TaxID=2742 RepID=A0A0K1UGD5_9GAMM) HSP 1 Score: 335 bits (859), Expect = 1.420e-113 Identity = 165/178 (92.70%), Postives = 176/178 (98.88%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
NRRIPRSD+Q+FSQKNIFILPTGAG+VFGLLLVI+LLTGINYQNSLIYL+TFLLGA FVGAMHQTHRNLSG+ELTLVQPGEGFAGDDIPFRFRLKAGRDDAIA+LLSCEESGLAPVHV SG+S+DVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSW+RPVSAG+VFPRPVPAPEA
Sbjct: 14 NRRIPRSDLQTFSQKNIFILPTGAGVVFGLLLVIMLLTGINYQNSLIYLTTFLLGAAFVGAMHQTHRNLSGVELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAMLLSCEESGLAPVHVQSGQSEDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWLRPVSAGVVFPRPVPAPEA 191
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: G6YRF2_9GAMM (DUF58 domain-containing protein n=2 Tax=Marinobacter TaxID=2742 RepID=G6YRF2_9GAMM) HSP 1 Score: 330 bits (846), Expect = 1.350e-111 Identity = 161/178 (90.45%), Postives = 174/178 (97.75%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
NRRIPRSD+Q+FSQKNIFILPTGAG+VFGLLLVI+LLTGINYQNSLIYL TFLLGAVFVGAMHQTHRNLSG+ELTL+QPGEGFAGDDIPFRFRL+AGRDDAIAILLSCEESG APVHVH G++QDV+LPVHSAHRGYLRPDR+RIETRFPFGLLKAWSW+RPVSAG+VFPR VPAPEA
Sbjct: 14 NRRIPRSDLQTFSQKNIFILPTGAGVVFGLLLVIMLLTGINYQNSLIYLGTFLLGAVFVGAMHQTHRNLSGVELTLIQPGEGFAGDDIPFRFRLRAGRDDAIAILLSCEESGHAPVHVHCGQAQDVSLPVHSAHRGYLRPDRIRIETRFPFGLLKAWSWIRPVSAGVVFPRQVPAPEA 191
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: A0A2E2QRZ9_HALSX (DUF58 domain-containing protein n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A2E2QRZ9_HALSX) HSP 1 Score: 325 bits (834), Expect = 8.950e-110 Identity = 161/178 (90.45%), Postives = 172/178 (96.63%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
NRRIPRSD+Q FSQKNIFILPTGAG+VFGLLLVI+LLTGINYQNSL+YLSTFLLGAVFVGAMHQTHRNLSGLE+TLVQPGEGFAGDDIPFRFRL+AGRDDAIAILLSC ESG APVHVHSG+ DV+L VHSAHRGYLRPDR+RIETRFPFGLLKAWSW+RPVSAG+VFPRPVPAPEA
Sbjct: 14 NRRIPRSDLQFFSQKNIFILPTGAGVVFGLLLVIMLLTGINYQNSLVYLSTFLLGAVFVGAMHQTHRNLSGLEVTLVQPGEGFAGDDIPFRFRLRAGRDDAIAILLSCAESGHAPVHVHSGQVLDVSLLVHSAHRGYLRPDRIRIETRFPFGLLKAWSWIRPVSAGVVFPRPVPAPEA 191
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: A0A2G1VHN6_9GAMM (DUF58 domain-containing protein n=4 Tax=Marinobacter TaxID=2742 RepID=A0A2G1VHN6_9GAMM) HSP 1 Score: 325 bits (832), Expect = 1.800e-109 Identity = 162/178 (91.01%), Postives = 171/178 (96.07%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
NRRIPRSD+QSFSQKNIFILPTGAG VFGLLL I+LLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAI+LS EE G APVHVHS ++QDV+L VHSAHRGYLRPDR+RIETRFPFGLLKAWSW+RPVSAG+VFPRPVPAPEA
Sbjct: 14 NRRIPRSDLQSFSQKNIFILPTGAGAVFGLLLFIMLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAIMLSSEELGHAPVHVHSRQAQDVSLTVHSAHRGYLRPDRIRIETRFPFGLLKAWSWIRPVSAGVVFPRPVPAPEA 191
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: UPI001C08C533 (DUF58 domain-containing protein n=1 Tax=Marinobacter sp. F3R08 TaxID=2841559 RepID=UPI001C08C533) HSP 1 Score: 309 bits (792), Expect = 2.140e-103 Identity = 152/178 (85.39%), Postives = 168/178 (94.38%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
N+R+PRSD+Q+FSQ+NIFILPTGAGLVFGLLLV++LLTGINYQNSLIYLSTFLLGA+FVGAMHQTHRNLSGLEL LVQ GEGFAGDDIPFRFRLKAGR+ +AILLS E+S LAPVHV SG++ DVTLPVHSA+RGYLRPDRVRIETRFPFGLLKAWSW+RPVS G+ FPRPVPAPEA
Sbjct: 14 NKRVPRSDLQAFSQRNIFILPTGAGLVFGLLLVVMLLTGINYQNSLIYLSTFLLGALFVGAMHQTHRNLSGLELALVQSGEGFAGDDIPFRFRLKAGREGGVAILLSSEDSELAPVHVVSGQALDVTLPVHSAYRGYLRPDRVRIETRFPFGLLKAWSWIRPVSVGVAFPRPVPAPEA 191
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: A0A1I6GCN2_9GAMM (Uncharacterized conserved protein, DUF58 family, contains vWF domain n=1 Tax=Marinobacter gudaonensis TaxID=375760 RepID=A0A1I6GCN2_9GAMM) HSP 1 Score: 309 bits (791), Expect = 3.030e-103 Identity = 146/178 (82.02%), Postives = 170/178 (95.51%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
NRRIPRSD+Q+FSQK IFILPTGAG+VFGLLLVI+LLTGINYQNSLIYL+TFLLGAVFVGAMHQTHRNLSGLEL+L+QPGEGFAGDDIPFR RLKAGRDDA+A+++SC++S PVHV SG+++D+ LPVHSAHRGYLRPDR+R+ETRFPFGLLKAWSW+RPVSAG+VFPRP+ AP++
Sbjct: 14 NRRIPRSDLQTFSQKTIFILPTGAGVVFGLLLVIMLLTGINYQNSLIYLTTFLLGAVFVGAMHQTHRNLSGLELSLIQPGEGFAGDDIPFRLRLKAGRDDAVAVVISCKDSRHTPVHVRSGQAEDLVLPVHSAHRGYLRPDRIRVETRFPFGLLKAWSWLRPVSAGVVFPRPIAAPDS 191
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: UPI001C4A8121 (DUF58 domain-containing protein n=1 Tax=Marinobacter sp. CAU 1620 TaxID=2856822 RepID=UPI001C4A8121) HSP 1 Score: 290 bits (742), Expect = 8.000e-96 Identity = 138/178 (77.53%), Postives = 163/178 (91.57%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
NRRIPR+DVQ +QKNIFILPTGAG+VFG+LL+++L+TGINYQNSLIYL+TFLLGAVFVGAMHQTHRNLSGLE+TLVQPGEG AG+++PFR R AGRD AIAI LSC+ SGL H+ +G+++D+TLPV SAHRGYLRPDR+RIETRFPFGLLKAWSW+RPVS G+VFPRPVPAP++
Sbjct: 14 NRRIPRTDVQLLNQKNIFILPTGAGVVFGVLLLVMLITGINYQNSLIYLTTFLLGAVFVGAMHQTHRNLSGLEITLVQPGEGVAGEEVPFRMRATAGRDHAIAIRLSCDGSGLGAAHIAAGQAKDLTLPVPSAHRGYLRPDRIRIETRFPFGLLKAWSWIRPVSPGIVFPRPVPAPDS 191
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: A0A072NGP4_9GAMM (DUF58 domain-containing protein n=2 Tax=Marinobacter nitratireducens TaxID=1137280 RepID=A0A072NGP4_9GAMM) HSP 1 Score: 289 bits (739), Expect = 1.880e-95 Identity = 139/177 (78.53%), Postives = 163/177 (92.09%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPE 531
NRRIPRSD Q+F QKNIFILPTGAG+VFG+LL+I+L+TGINYQNSLIYL TFLLGAVFVGAMHQTHRNL+GLELTL++PGEG AGDDIPFRFR AG+DDA+AI+LS E+S LAPVHV +G++ DV+LP+ SA+RGY+RPDRVRIETRFPFGLLKAWSW+RP SAG+ FPRP+ AP+
Sbjct: 10 NRRIPRSDTQAFQQKNIFILPTGAGVVFGMLLLIMLITGINYQNSLIYLITFLLGAVFVGAMHQTHRNLAGLELTLLRPGEGVAGDDIPFRFRAAAGKDDAVAIVLSVEDSELAPVHVAAGQAVDVSLPIPSAYRGYVRPDRVRIETRFPFGLLKAWSWIRPASAGIAFPRPLKAPD 186
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Match: A0A366G5R4_9GAMM (Uncharacterized protein (DUF58 family) n=3 Tax=Marinobacter pelagius TaxID=379482 RepID=A0A366G5R4_9GAMM) HSP 1 Score: 288 bits (737), Expect = 4.170e-95 Identity = 138/178 (77.53%), Postives = 162/178 (91.01%), Query Frame = 1
Query: 1 NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSTFLLGAVFVGAMHQTHRNLSGLELTLVQPGEGFAGDDIPFRFRLKAGRDDAIAILLSCEESGLAPVHVHSGRSQDVTLPVHSAHRGYLRPDRVRIETRFPFGLLKAWSWVRPVSAGLVFPRPVPAPEA 534
NRR+PRSD QSF+QKNIFILPTGAG+VFG+LL+++L+TGINYQNSLIYL+TFLLGA+FVGAMHQTHRNLSGL+LT+ QPGEGFAGD++P+RFR AG+ AIAI LSCE S LAP H+ +G+++DVTLPV SAHRGYLRPD VRIETRFPFGLLKAWSWVRP+S +VFPRPV AP+A
Sbjct: 14 NRRVPRSDSQSFNQKNIFILPTGAGVVFGILLLVMLITGINYQNSLIYLTTFLLGALFVGAMHQTHRNLSGLQLTVTQPGEGFAGDEVPYRFRASAGKGPAIAIRLSCEGSVLAPFHIPAGQARDVTLPVPSAHRGYLRPDMVRIETRFPFGLLKAWSWVRPISPAIVFPRPVAAPDA 191 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121184.4366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121184.4366.1 >prot_M-pyrifera_M_contig121184.4366.1 ID=prot_M-pyrifera_M_contig121184.4366.1|Name=mRNA_M-pyrifera_M_contig121184.4366.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp NRRIPRSDVQSFSQKNIFILPTGAGLVFGLLLVILLLTGINYQNSLIYLSback to top mRNA from alignment at M-pyrifera_M_contig121184:1..534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121184.4366.1 ID=mRNA_M-pyrifera_M_contig121184.4366.1|Name=mRNA_M-pyrifera_M_contig121184.4366.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig121184:1..534- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121184:1..534- >mRNA_M-pyrifera_M_contig121184.4366.1 ID=mRNA_M-pyrifera_M_contig121184.4366.1|Name=mRNA_M-pyrifera_M_contig121184.4366.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig121184:1..534- (Macrocystis pyrifera P11B4 male)back to top |