mRNA_M-pyrifera_M_contig12116.4354.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: D7FNB2_ECTSI (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB2_ECTSI) HSP 1 Score: 95.9 bits (237), Expect = 5.170e-19 Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 1
Query: 1 DIPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKRREA---RDRFDHLNSES---RGISFPLMRGESP 234
DIPALRQFCLVAATAV VGF LQ++WFMAAL LDARRVSQGRLDLAPW+ E DRF + + ES R ++ PL+ +SP
Sbjct: 477 DIPALRQFCLVAATAVVVGFALQISWFMAALCLDARRVSQGRLDLAPWMTLPEEDDDSDRFWYSSPESGSVRDLTVPLLGFQSP 560
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A6A5A678_9STRA (SSD domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A678_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 5.290e-9 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 153
IPAL FC+VAA AV +VLQ+TWF AAL+LDARR+ R DL PW+K+
Sbjct: 28 IPALESFCMVAALAVVADYVLQMTWFAAALALDARRMRARRYDLCPWIKK 77
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A067D4S9_SAPPC (SSD domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4S9_SAPPC) HSP 1 Score: 65.1 bits (157), Expect = 1.640e-8 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 153
IPAL FC+VAA AV +VLQ+TWF AAL++DARRV R DL PW+K+
Sbjct: 422 IPALESFCIVAALAVVADYVLQMTWFAAALAIDARRVRARRYDLMPWMKK 471
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: W4FCV1_9STRA (SSD domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCV1_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 1.640e-8 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 153
IPAL FC+VAA AV +VLQ+TWF AAL+LDARR+ R DL PW+K+
Sbjct: 413 IPALESFCMVAALAVVADYVLQMTWFAAALALDARRMRARRYDLCPWIKK 462
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: F0WDX3_9STRA (ResistanceNodulationCell Division (RND) Superfamily putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDX3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.010e-8 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKRRE 159
IPAL FC+VAA AV V +LQ+TWFM+A+ LDA RV R DL PW+++RE
Sbjct: 467 IPALETFCVVAAVAVLVDLILQLTWFMSAIVLDAHRVRARRYDLFPWIRKRE 518
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A421G8C8_9STRA (SSD domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G8C8_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.090e-8 Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKRR 156
IPAL FC+VAA AVA FVLQ+TWF AAL LDARR+ R D+ PW+K++
Sbjct: 595 IPALTSFCVVAALAVAADFVLQMTWFAAALVLDARRMRSRRYDVFPWIKQK 645
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A485KZV1_9STRA (Aste57867_13917 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZV1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.010e-8 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 153
IPAL FC VAA AV +VLQ+TWF AAL+LDARR+ R DL PW+K+
Sbjct: 369 IPALESFCTVAAIAVVADYVLQMTWFAAALALDARRMRARRYDLCPWIKK 418
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A6G0XWB6_9STRA (SSD domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWB6_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.030e-8 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 153
IPAL FC VAA AV +VLQ+TWF AAL+LDARR+ R DL PW+K+
Sbjct: 413 IPALESFCTVAAIAVIADYVLQMTWFAAALALDARRIRSRRYDLFPWIKK 462
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A024UE41_9STRA (SSD domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UE41_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.040e-8 Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 153
IPAL FC+VAA AV + LQ+TWF AAL+LDARR+ R DL PW+K+
Sbjct: 413 IPALESFCIVAALAVVADYCLQMTWFAAALALDARRIRARRYDLCPWMKK 462
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A1V9ZMJ5_9STRA (Resistance-Nodulation-Cell Division (RND) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMJ5_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.040e-8 Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 4 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 153
IPAL FC+VAA AV ++LQ+TWF AAL++DARRV R DL PW+K+
Sbjct: 422 IPALESFCIVAAIAVLADYLLQITWFAAALAIDARRVRARRYDLFPWIKK 471 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12116.4354.1 >prot_M-pyrifera_M_contig12116.4354.1 ID=prot_M-pyrifera_M_contig12116.4354.1|Name=mRNA_M-pyrifera_M_contig12116.4354.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp DIPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKback to top mRNA from alignment at M-pyrifera_M_contig12116:3204..6338+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12116.4354.1 ID=mRNA_M-pyrifera_M_contig12116.4354.1|Name=mRNA_M-pyrifera_M_contig12116.4354.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3135bp|location=Sequence derived from alignment at M-pyrifera_M_contig12116:3204..6338+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12116:3204..6338+ >mRNA_M-pyrifera_M_contig12116.4354.1 ID=mRNA_M-pyrifera_M_contig12116.4354.1|Name=mRNA_M-pyrifera_M_contig12116.4354.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1398bp|location=Sequence derived from alignment at M-pyrifera_M_contig12116:3204..6338+ (Macrocystis pyrifera P11B4 male)back to top |