mRNA_M-pyrifera_M_contig121152.4351.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: A0A7S4BCY7_CHRCT (3-phosphoshikimate 1-carboxyvinyltransferase (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCY7_CHRCT) HSP 1 Score: 99.0 bits (245), Expect = 5.020e-22 Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLAAHWPV 300
+V++GMRGAGKT LG + A LG++F+D D + EAR G I + +A GW +FR+ E AIL LS S V+ACGGG+VE AE RA+L AHWPV
Sbjct: 848 VVLIGMRGAGKTHLGKAAAAHLGWDFIDLDHLYEARHG-PIMQTVAAEGWSAFRERELAILKETLSTKSART----VIACGGGIVETAEARAVLRAHWPV 942
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: A0A7S0PXC9_9EUKA (3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PXC9_9EUKA) HSP 1 Score: 97.8 bits (242), Expect = 1.280e-21 Identity = 55/100 (55.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLAAHWPV 300
+V+VGMRGAGKT LG + A LG++FLD D + EAR G I E + GW SFR E LL ET S V+ACGGG+VE AE RA+LAAHWPV
Sbjct: 400 VVLVGMRGAGKTHLGRAAAAALGWQFLDLDHLYEARHGPII-EAVEAEGWPSFRARE----LQLLKETLSSRPARTVIACGGGIVETAEARAVLAAHWPV 494
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: A0A0M0JNT7_9EUKA (Pentafunctional protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JNT7_9EUKA) HSP 1 Score: 97.4 bits (241), Expect = 1.320e-21 Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLAAHWPV 300
IV++GMRGAGKT LG + A LG F+D D + EA G+ I + + GW +FR E A+L L+E + G+GRVVACGGG+VE R LL AHWPV
Sbjct: 21 IVLIGMRGAGKTHLGRAAAAALGLPFIDMDHLYEAEHGK-IMDTVNTEGWPTFRQREVALLKRTLAEDA-EGGRGRVVACGGGIVETEAGRELLRAHWPV 118
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: A0A0D7AWR8_9AGAR (Quinate repressor protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7AWR8_9AGAR) HSP 1 Score: 96.3 bits (238), Expect = 4.370e-21 Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLAA---HWPV 300
IV++GMRG GKT+LG+ AK LG+E LD D++LE + SI ++IA HGW++FR E I+ +L G+V+ACGGGVVE ENRA+LA H PV
Sbjct: 28 IVLIGMRGVGKTTLGTIAAKALGWELLDTDRILENQEKMSISDYIATHGWEAFRALESQIIHDILRVHHT----GKVIACGGGVVELEENRAMLAKFRQHGPV 126
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: UPI001902ED59 (type I 3-dehydroquinase-domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI001902ED59) HSP 1 Score: 94.4 bits (233), Expect = 2.080e-20 Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALL 282
I++VGMRG GKT+L +K LG+E +DAD + A + + I +I+ HGWDSFR++E +L +LL + +V+ACGGGVVERAENR LL
Sbjct: 27 IILVGMRGVGKTTLARIASKALGWEAIDADTIFAAHVKQDIYSYISTHGWDSFRNKESQLLNALLDRYPTN----KVIACGGGVVERAENRELL 116
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: S2JQW8_MUCC1 (Pentafunctional AROM polypeptide n=2 Tax=Mucor TaxID=4830 RepID=S2JQW8_MUCC1) HSP 1 Score: 94.4 bits (233), Expect = 2.140e-20 Identity = 49/97 (50.52%), Postives = 66/97 (68.04%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLAAH 291
+VIVGMRG GKT+LG A+VLG++F+D DQ E L ++ E I GWD FR +E A L LL++ S G+G V+ACGGG++E AE+R +L H
Sbjct: 898 MVIVGMRGVGKTTLGQYAAEVLGFKFIDVDQYFEETLKTTVFEFINTWGWDQFRIKETAALKELLAKDS-QYGRGYVIACGGGIIETAESRDVLKEH 993
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: A0A7S0IKK0_9EUKA (Quinate repressor protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IKK0_9EUKA) HSP 1 Score: 93.2 bits (230), Expect = 5.230e-20 Identity = 51/97 (52.58%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 10 VGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLAAHWPV 300
+GMRGAGKT LG + A LG+ FLD D V EAR G+ I + + GW FR E LL ET S V+ACGGG+VE AE RA+L AHWPV
Sbjct: 1 IGMRGAGKTHLGKAAAVSLGWHFLDMDSVYEARFGK-IMQTVEADGWPVFRRRE----LELLKETLASHAAHTVIACGGGIVETAEARAVLVAHWPV 92
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: S7TB75_9DELT (Shikimate kinase n=1 Tax=Desulfohalovibrio alkalitolerans DSM 16529 TaxID=1121439 RepID=S7TB75_9DELT) HSP 1 Score: 89.4 bits (220), Expect = 5.430e-20 Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLA 285
I +VG RG+GKT++G A+ LG F+DAD+ L LG+SI +++A HGW++FR+ EH LA + + G+VVA GGGVV RA+NR L+A
Sbjct: 38 IYLVGPRGSGKTTVGRLAAERLGLRFVDADEALVQSLGQSIADYVAAHGWEAFREREHETLARIAAS------HGQVVATGGGVVLRADNRELMA 126
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: A0A0B7N4X1_9FUNG (Pentafunctional AROM polypeptide n=5 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7N4X1_9FUNG) HSP 1 Score: 93.2 bits (230), Expect = 5.430e-20 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLAAH 291
+VIVGMRG GKT+LG A+VLG++F+D DQ E L ++ E I GWD FR +E A L LL++ S G G V+ACGGG++E AE+R +L H
Sbjct: 895 MVIVGMRGVGKTTLGQYAAEVLGFKFIDVDQYFEETLQTTVFEFINTWGWDQFRVKETAALKELLAKDS-QYGLGYVIACGGGIIETAESREVLKEH 990
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Match: A0A0P9EUM8_RHOGW (Shikimate kinase (Fragment) n=1 Tax=Rhodotorula graminis (strain WP1) TaxID=578459 RepID=A0A0P9EUM8_RHOGW) HSP 1 Score: 85.9 bits (211), Expect = 1.510e-19 Identity = 50/95 (52.63%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 1 IVIVGMRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDEEHAILASLLSETSVSDGKGRVVACGGGVVERAENRALLA 285
IV++GMRG GKT+LG A L F+DAD + G I + + HGW +FRD E ILA LL E +G VVACGGGVVER ENR LLA
Sbjct: 9 IVLIGMRGVGKTTLGLIAATSLRRSFIDADSAFQTLHG-PISQFVNTHGWSAFRDAETRILAQLLREHP----RGYVVACGGGVVERDENRELLA 98 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121152.4351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121152.4351.1 >prot_M-pyrifera_M_contig121152.4351.1 ID=prot_M-pyrifera_M_contig121152.4351.1|Name=mRNA_M-pyrifera_M_contig121152.4351.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp MRGAGKTSLGSSTAKVLGYEFLDADQVLEARLGRSIKEHIAEHGWDSFRDback to top mRNA from alignment at M-pyrifera_M_contig121152:216..515+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121152.4351.1 ID=mRNA_M-pyrifera_M_contig121152.4351.1|Name=mRNA_M-pyrifera_M_contig121152.4351.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig121152:216..515+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121152:216..515+ >mRNA_M-pyrifera_M_contig121152.4351.1 ID=mRNA_M-pyrifera_M_contig121152.4351.1|Name=mRNA_M-pyrifera_M_contig121152.4351.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig121152:216..515+ (Macrocystis pyrifera P11B4 male)back to top |