mRNA_M-pyrifera_M_contig121008.4322.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: A0A517WQI5_9PLAN (Long-chain-fatty-acid--CoA ligase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WQI5_9PLAN) HSP 1 Score: 238 bits (607), Expect = 1.320e-73 Identity = 116/166 (69.88%), Postives = 137/166 (82.53%), Query Frame = 1
Query: 4 FDALLGYEPLVEQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
F LL E LV VE +PA ILFTSGSTGHPKGV+HSH GAF+GI+ SR+IF+F +D+VLVGKPI+HAGGLQTQLMP L VG +V+L+M+P PA A S+I +V+EYG+LASDLLDFVEYLE++ T LPTLKNSIGSGD+VP DLHHRFRD+LGWEVMEG
Sbjct: 141 FSVLLETEALVSGINVEPGNPAFILFTSGSTGHPKGVIHSHAGAFAGIETSRQIFEFTSEDVVLVGKPISHAGGLQTQLMPALSVGARVVLSMRPTPASAVSIIQAESVTEYGMLASDLLDFVEYLEQN-PTGLPTLKNSIGSGDAVPTDLHHRFRDLLGWEVMEG 305
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: A0A7V8V2G8_9BACT (Long-chain-fatty-acid--CoA ligase n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V2G8_9BACT) HSP 1 Score: 235 bits (599), Expect = 2.170e-72 Identity = 117/166 (70.48%), Postives = 134/166 (80.72%), Query Frame = 1
Query: 4 FDALLGYEPLVEQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
F +LL L E+ +V A+ PALILFTSGSTGHPKGVVHSH+GAFS ID SRR+FDF DIVLVGK I+HAGGLQTQ++P LL GG+VIL KP PAQA +I H V+EYG+LASDLLDF+EYLEE+ T LPTL N+IGSGDSVP DLHHRF D+L WEVMEG
Sbjct: 140 FASLLSAGSLDEEASVAAEDPALILFTSGSTGHPKGVVHSHEGAFSAIDQSRRLFDFTPADIVLVGKSISHAGGLQTQMLPALLAGGEVILESKPTPAQAVEMIAQHGVTEYGMLASDLLDFIEYLEENR-TALPTLNNAIGSGDSVPADLHHRFCDLLDWEVMEG 304
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: UPI001CCB376A (acyl--CoA ligase n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCB376A) HSP 1 Score: 231 bits (590), Expect = 4.550e-71 Identity = 115/167 (68.86%), Postives = 131/167 (78.44%), Query Frame = 1
Query: 1 SFDALLGYEPLVEQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
SFDALL L + V A PALILFTSGSTGHPKGVVHSH G F ID SR +FDF DD+VLVGKPI+HAGGLQTQ+MP L GG+V+LAM+PEPA A LI + V+EYG+LASDLLDF+EYLE + A LP+L N+IGSGDSVP DLHHRFRD+ WEVMEG
Sbjct: 139 SFDALLTCGELEKAVPVSADDPALILFTSGSTGHPKGVVHSHSGCFHAIDQSRALFDFTADDVVLVGKPISHAGGLQTQMMPVWLAGGEVLLAMRPEPAAAVKLIQSQNVTEYGMLASDLLDFIEYLEANRA-ELPSLVNAIGSGDSVPSDLHHRFRDLFDWEVMEG 304
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: A0A2S8G7U4_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8G7U4_9BACT) HSP 1 Score: 226 bits (576), Expect = 5.700e-69 Identity = 112/166 (67.47%), Postives = 131/166 (78.92%), Query Frame = 1
Query: 4 FDALLGYEPLVEQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
F+ L E E+ V+ PALILFTSGSTGHPKGVVHS +G + ID SR +FDF +DIVLVGKPI+HAGGLQTQ++P LL GG+VIL MKP PA+A LI+ H V+EYGLLASDLLDFVEYLE S ++ LP+L N+IGSGD+VP DLH RFRD LGWEVMEG
Sbjct: 140 FNQWLEGEAQAEKVPVKENEPALILFTSGSTGHPKGVVHSQEGVYEAIDQSRSLFDFNSEDIVLVGKPISHAGGLQTQMLPALLAGGEVILEMKPTPAEAVQLINAHQVTEYGLLASDLLDFVEYLE-STSSELPSLINAIGSGDAVPTDLHRRFRDCLGWEVMEG 304
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: A0A518DVM7_9BACT (Long-chain-fatty-acid--CoA ligase n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518DVM7_9BACT) HSP 1 Score: 225 bits (573), Expect = 1.520e-68 Identity = 110/155 (70.97%), Postives = 128/155 (82.58%), Query Frame = 1
Query: 37 EQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
E + V A HPALILFTSGSTG PKGVVHSHQGA+ ID SR++FDF+ DDIVLVGKPI HAGGLQTQL+P LL G QVILAMKP PA A +L+ + +V+EYGLLASDLLDF+EYLE + LP+LK IGSGD+VPVDLH RFR++ GWE+MEG
Sbjct: 151 EDQPVGADHPALILFTSGSTGRPKGVVHSHQGAYGAIDASRQLFDFKADDIVLVGKPICHAGGLQTQLLPALLAGCQVILAMKPTPAAAVALLQSLSVTEYGLLASDLLDFIEYLE-ARPVDLPSLKYGIGSGDTVPVDLHQRFRELFGWEIMEG 304
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: UPI001E5A2538 (acyl--CoA ligase n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E5A2538) HSP 1 Score: 220 bits (560), Expect = 9.970e-67 Identity = 109/166 (65.66%), Postives = 127/166 (76.51%), Query Frame = 1
Query: 4 FDALLGYEPLVEQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
F+ LL EP + V + ALILFTSGSTGHPKGVVHSH G +S I SR +FDFQ D+VLVGKPI+HAGGL TQ+M L G +V+L MKP PA A + I+ V+EYG+LASDLLDFVEYLE+ H T LPTL N+IGSGD+VP DLHHRFRD+LGWEVMEG
Sbjct: 126 FEQLLSGEPDDVRAPVHEEDAALILFTSGSTGHPKGVVHSHGGVYSAIAQSRELFDFQASDVVLVGKPISHAGGLHTQMMAAFLAGAEVVLMMKPAPAVAVAAINQFGVTEYGMLASDLLDFVEYLEQ-HPTPLPTLNNAIGSGDAVPSDLHHRFRDLLGWEVMEG 290
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: A0A5C5V0A0_9BACT (Long-chain-fatty-acid--CoA ligase n=2 Tax=Blastopirellula retiformator TaxID=2527970 RepID=A0A5C5V0A0_9BACT) HSP 1 Score: 216 bits (550), Expect = 8.290e-65 Identity = 108/166 (65.06%), Postives = 126/166 (75.90%), Query Frame = 1
Query: 4 FDALLGYEPLVEQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
FD LL + E +V PALILFTSGSTG PKGVVHSH G +S I SR +FDFQ D+VLVGKPI+HAGGL TQ+ +L G +VIL MKP P QA + I+ V+EYG+LASDLLDFVEYLE+ H T LP+LKN+IGSGD+VP DLHHRFRD+L WEVMEG
Sbjct: 171 FDRLLAAKADNEVASVAEADPALILFTSGSTGRPKGVVHSHGGVYSAIAQSRELFDFQPSDVVLVGKPISHAGGLHTQMFAAMLAGAEVILTMKPTPQQAVAAINQDGVTEYGMLASDLLDFVEYLEQ-HPTPLPSLKNAIGSGDAVPSDLHHRFRDLLNWEVMEG 335
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: UPI0018829FB3 (AMP-binding protein n=3 Tax=unclassified Cyanobium TaxID=2627006 RepID=UPI0018829FB3) HSP 1 Score: 200 bits (508), Expect = 6.580e-59 Identity = 98/166 (59.04%), Postives = 123/166 (74.10%), Query Frame = 1
Query: 4 FDALLGYEPLVEQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
+ ALLG P+ + + HPALILFTSGSTG PKGVVHSH G + ID R D Q DD+VLVGKP++HAGGLQTQL+P+L G QV+LA +P A AA+LI H VSE+GLLASDLLDFV++LE + LP+L+ IGSGD+VP++L RFR++ GW V+EG
Sbjct: 125 WPALLGAAPIDPVQDLPEDHPALILFTSGSTGQPKGVVHSHHGCLAAIDTCRLALDLQADDVVLVGKPLSHAGGLQTQLLPSLRAGAQVLLATRPSAATAAALIQQHGVSEFGLLASDLLDFVDHLE-TRQLALPSLRRVIGSGDTVPMELQKRFRELFGWPVLEG 289
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: A0A7R9Z3N0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z3N0_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.670e-58 Identity = 97/151 (64.24%), Postives = 117/151 (77.48%), Query Frame = 1
Query: 49 VEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
V PALILFTSGSTG PKGVVHSH+G+F ID+SR++F F D+V+VGKPI+HAGGLQTQL+P LL G +VIL +P P +A LI +V++ LLASDLLDFVEYLE H+ LP+L N IGSGDSVP+DLH RF D+ GW+VMEG
Sbjct: 159 VPEDSPALILFTSGSTGRPKGVVHSHEGSFCAIDVSRQVFGFDETDVVMVGKPISHAGGLQTQLLPALLAGAEVILEDRPIPDRAVELIRQFSVTQCALLASDLLDFVEYLE-LHSVELPSLNNLIGSGDSVPIDLHQRFLDIFGWQVMEG 308
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Match: A0A5J6Q3F2_9SYNE (Long-chain fatty acid--CoA ligase n=1 Tax=Synechococcus sp. RSCCF101 TaxID=2511069 RepID=A0A5J6Q3F2_9SYNE) HSP 1 Score: 192 bits (487), Expect = 9.620e-56 Identity = 91/151 (60.26%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 49 VEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDISRRIFDFQRDDIVLVGKPITHAGGLQTQLMPTLLVGGQVILAMKPEPAQAASLIDTHAVSEYGLLASDLLDFVEYLEESHATRLPTLKNSIGSGDSVPVDLHHRFRDVLGWEVMEG 501
V HPAL+LFTSGSTG PKGV+HSH+ ++ ID SR+ F +D+VLVGKP++HAGGLQTQL+P L+ G +V+L M+P PA+A +LI H VSEYGLLASDLLDFV++LE + TRLP+L+ IGSGDSVP +L RF+ GW +EG
Sbjct: 147 VPPDHPALLLFTSGSTGQPKGVLHSHRSCWTSIDTSRQALGFTEEDVVLVGKPLSHAGGLQTQLLPALMAGARVVLTMRPSPAEAVALIQRHQVSEYGLLASDLLDFVDHLEVTE-TRLPSLRTVIGSGDSVPHELQERFQARFGWPALEG 296 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121008.4322.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121008.4322.1 >prot_M-pyrifera_M_contig121008.4322.1 ID=prot_M-pyrifera_M_contig121008.4322.1|Name=mRNA_M-pyrifera_M_contig121008.4322.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp SFDALLGYEPLVEQEAVEAQHPALILFTSGSTGHPKGVVHSHQGAFSGIDback to top mRNA from alignment at M-pyrifera_M_contig121008:36..536+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121008.4322.1 ID=mRNA_M-pyrifera_M_contig121008.4322.1|Name=mRNA_M-pyrifera_M_contig121008.4322.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig121008:36..536+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121008:36..536+ >mRNA_M-pyrifera_M_contig121008.4322.1 ID=mRNA_M-pyrifera_M_contig121008.4322.1|Name=mRNA_M-pyrifera_M_contig121008.4322.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig121008:36..536+ (Macrocystis pyrifera P11B4 male)back to top |