mRNA_M-pyrifera_M_contig1209.4300.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Match: A0A2A4JRI1_HELVI (Uncharacterized protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4JRI1_HELVI) HSP 1 Score: 58.5 bits (140), Expect = 4.350e-8 Identity = 34/85 (40.00%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 1 DEAWICDSGASTHMTPSADCMIHYRECNLT-LRIADGSTRAIKGYGDVSVVFRSGNGPLLLTNVAHVPDLRYHLLSLPTLVKNGH 252
D W DSGAS HMT D M E ++ + +A+ A+KG G V + S + + + NV +VP L +LLS+ T+VKNGH
Sbjct: 250 DNKWFLDSGASMHMTSRKDWMYKVTEPSVNNITVANKEPLAVKGVGCVDIHI-SQDKVIQVNNVLYVPGLAANLLSVSTIVKNGH 333
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Match: A0A6H5KG88_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG88_9PHAE) HSP 1 Score: 55.5 bits (132), Expect = 5.220e-7 Identity = 30/85 (35.29%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 10 WICDSGASTHMTPSADCMIHYRECNLTLRIADGSTRAIK--GYGDVSVVFRSGNG--PLLLTNVAHVPDLRYHLLSLPTLVKNGH 252
++ D+ A+ M D ++YRE + ++ G + GYGDV++V ++ +G P+ + N AHVP+ Y+LLSL +LV+ GH
Sbjct: 548 YVADTAATCSMFRCTDNFVNYREHSGWVKGIGGDKAPVPLLGYGDVTLVLQTEDGGVPVPVRNAAHVPEAPYNLLSLSSLVEEGH 632
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Match: A0A2I0V6M5_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0V6M5_9ASPA) HSP 1 Score: 52.8 bits (125), Expect = 4.680e-6 Identity = 30/85 (35.29%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 4 EAWICDSGASTHMTPSADCMIH---YRECNLTLRIADGSTRAIKGYGDVSVVFRSGNGPLLLTNVAHVPDLRYHLLSLPTLVKNG 249
+ W DSGAS HMT ++D + + YR ++ I DG +I G+ + + N L+L+N+ H+P++ Y+LLS+ TLV++
Sbjct: 322 QEWFLDSGASAHMTNASDNLSNPSIYRGSE-SVTIGDGRNLSIAQSGNG--ILPTPNRKLILSNLLHIPNISYNLLSISTLVRDN 403
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Match: A0A1Y3MZD1_PIRSE (Uncharacterized protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3MZD1_PIRSE) HSP 1 Score: 50.4 bits (119), Expect = 2.950e-5 Identity = 28/80 (35.00%), Postives = 44/80 (55.00%), Query Frame = 1
Query: 10 WICDSGASTHMTPSADCMIHYRECNLTLRIADGSTRAIKGYGDVSVVFRSGNGPLLLTNVAHVPDLRYHLLSLPTLVKNG 249
W D+GAS H+T + + + +++E +TL+ A+GST G G N ++L NV + D+ +LLS L KNG
Sbjct: 239 WTFDTGASEHITNNKEILTNFKEKEITLKCANGSTCNFDGIGTYEGSINGYN--IILDNVLYSKDVNKNLLSGIKLAKNG 316
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Match: A0A0V0HGM7_SOLCH (Putative ovule protein (Fragment) n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0HGM7_SOLCH) HSP 1 Score: 50.1 bits (118), Expect = 3.460e-5 Identity = 26/84 (30.95%), Postives = 46/84 (54.76%), Query Frame = 1
Query: 4 EAWICDSGASTHMTPSADCM----IHYRECNLTLRIADGSTRAIKGYGDVSVVFRSGNGPLLLTNVAHVPDLRYHLLSLPTLVK 243
+ WI D+GA+ HM S D + ++ E + + + +G T + G S+ RS +++NV H+PD +Y+LLS+ + K
Sbjct: 30 KVWIVDTGATNHMVSSVDMLNGNTVNKLEVSKPVYLPNGDTTQVSHTGSCSLSERS-----IISNVLHIPDFKYNLLSVSQITK 108
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Match: A0A151RRX2_CAJCA (Uncharacterized protein n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RRX2_CAJCA) HSP 1 Score: 49.3 bits (116), Expect = 5.060e-5 Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 1 DEAWICDSGASTHMTPSADCMIHYRECNLTLRIADGSTRA-IKGYGDVSVVFRSGNGPLLLTNVAHVPDLRYHLLSLPTLVKNG 249
D WI DSGA++H+ S + Y + + + ST+ ++G G + + N + L NV H+P+ R++LLSL TL+
Sbjct: 120 DNTWIIDSGATSHICCSKNMYNSYSPIHNSNVLLPNSTKVKVEGIGSIRL-----NDDIFLHNVLHIPNFRFNLLSLLTLINEN 198
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Match: A0A151T1V6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T1V6_CAJCA) HSP 1 Score: 49.3 bits (116), Expect = 7.560e-5 Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 1 DEAWICDSGASTHMTPSADCMIHYRECNLTLRIADGSTRA-IKGYGDVSVVFRSGNGPLLLTNVAHVPDLRYHLLSLPTLVKNG 249
D WI DSGA++H+ S + Y + + + ST+ ++G G + + N + L NV H+P+ R++LLSL TL+
Sbjct: 310 DNTWIIDSGATSHICCSKNMYNSYSPLHNSNVLLPNSTKVKVEGIGSIRL-----NDDIFLHNVLHIPNFRFNLLSLLTLINEN 388
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Match: A0A1S4A801_TOBAC (uncharacterized protein LOC107794761 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4A801_TOBAC) HSP 1 Score: 49.3 bits (116), Expect = 7.630e-5 Identity = 28/82 (34.15%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 10 WICDSGASTHMTPSADCMIHYRECNL----TLRIADGSTRAIKGYGDVSVVFRSGNGPLLLTNVAHVPDLRYHLLSLPTLVK 243
WI DSGAS+HM S +++ + N T+++ G+ +I G +V G ++NV H+PD +Y+LLS+ L K
Sbjct: 140 WIVDSGASSHMVHSLSLLVNPKRLNNGKNGTVQLPTGNAASISHIGSTYIV--QGQ---TISNVLHIPDFKYNLLSVSKLTK 216 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1209.4300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1209.4300.1 >prot_M-pyrifera_M_contig1209.4300.1 ID=prot_M-pyrifera_M_contig1209.4300.1|Name=mRNA_M-pyrifera_M_contig1209.4300.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp DEAWICDSGASTHMTPSADCMIHYRECNLTLRIADGSTRAIKGYGDVSVVback to top mRNA from alignment at M-pyrifera_M_contig1209:379..630- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1209.4300.1 ID=mRNA_M-pyrifera_M_contig1209.4300.1|Name=mRNA_M-pyrifera_M_contig1209.4300.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig1209:379..630- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1209:379..630- >mRNA_M-pyrifera_M_contig1209.4300.1 ID=mRNA_M-pyrifera_M_contig1209.4300.1|Name=mRNA_M-pyrifera_M_contig1209.4300.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig1209:379..630- (Macrocystis pyrifera P11B4 male)back to top |