mRNA_M-pyrifera_M_contig120836.4288.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: A0A2D7FIB8_9HYPH (Cell envelope integrity protein CreD n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FIB8_9HYPH) HSP 1 Score: 152 bits (383), Expect = 9.270e-41 Identity = 76/180 (42.22%), Postives = 111/180 (61.67%), Query Frame = 1
Query: 4 QRGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQIGDQTSR--FQAGVGVKGQ-RSSGVHIKLTSGQLNDGFAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARGMGQAHTQTHINKLMSKNLF 534
+RGI++VPVY + ++G+F+ L +++ L +A V ++DVRGIKKT ++ + + R F+AGVGV R G+H+ LT Q GFAF F+L +NG+ H+ + P G ET + + S+WPHPSF G +LP RKIS GF A+W+VP LARG+GQ+ LM+ F
Sbjct: 112 RRGIFNVPVYRSVTRFEGRFEKPVLRSFQQPDLTLEWAEAALVVTLNDVRGIKKTAELILDNGAGREKFRAGVGVASNGRVPGIHVPLTGEQAQSGFAFAFDLSLNGSSHIRYIPGGGETSVAIKSDWPHPSFAGAYLPENRKISDAGFAADWKVPRLARGIGQSIRLKQFRHLMTSKSF 291
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: E2CEE6_9HYPH (Inner membrane CreD family protein n=1 Tax=Roseibium sp. TrichSKD4 TaxID=744980 RepID=E2CEE6_9HYPH) HSP 1 Score: 129 bits (323), Expect = 6.160e-32 Identity = 64/175 (36.57%), Postives = 105/175 (60.00%), Query Frame = 1
Query: 4 QRGIYDVPVYNTKVTYDGKFDPADLDQYRRE---RFELRVNDAVFSVLVSDVRGIKKTTDVQIGDQTSRFQAGV-GVK------------GQRSSGVHIKLTSGQLNDGFAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARGM 480
++ IY +PVY +++++ G+F A + + R E+ + AV + + DVR +K ++ GD+ RFQ G+ G++ GQ SSG+H+++ +GFAF +L +NG++ L F P+G + + +TS+WPHP F G FLP+ R I+ TGF+A+W VP LARG+
Sbjct: 134 KKSIYTLPVYRSELSFSGRFGKAPDGMFEPKNGGRIEVAADKAVLVIGIRDVRALKSEVVLESGDRKLRFQPGLAGMRNPDPFQYMYKDSGQSSSGIHVRVEENDWRNGFAFKGDLALNGSRSLRFAPAGQTSAIKLTSDWPHPGFSGAFLPDNRTIAETGFDADWSVPFLARGL 308
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: UPI00036CCE2C (cell envelope integrity protein CreD n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00036CCE2C) HSP 1 Score: 128 bits (322), Expect = 7.360e-32 Identity = 65/175 (37.14%), Postives = 102/175 (58.29%), Query Frame = 1
Query: 1 LQRGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQIGD-QTSRFQAGVGVKGQRSSGVHIKLT-SGQLNDG------FAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARGMGQAHTQT 501
L R I+DV VY + +G+F D+ +R DA+F++ +SDV G+K+ +++ D +T F +G+ G SG+H KL + + +G F+F +L G+ L F P+ ET+++++S+WPHPSFMG FLP ER++ +GF A W+VPHLAR + T T
Sbjct: 112 LTRSIFDVNVYTASLRIEGRFGAPDVADVDPNAISIRWKDAIFALALSDVAGLKEAATLKVNDRETLPFAPSLGIPGNYLSGIHAKLDDAASVIEGESAAKAFSFQADLVFTGSSSLSFTPAARETRVELSSDWPHPSFMGAFLPVEREVGQSGFSAKWRVPHLARSVPNQWTTT 286
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: UPI0009FA265E (cell envelope integrity protein CreD n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009FA265E) HSP 1 Score: 126 bits (317), Expect = 3.820e-31 Identity = 68/171 (39.77%), Postives = 98/171 (57.31%), Query Frame = 1
Query: 1 LQRGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQI-GDQTSRFQAGVGVKGQRSSGVHIKL---TSGQLNDG----FAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARGMGQA 489
L R I+DV VY ++ G+F +++ + + +R DA F++ +SDV G+K+ + I G T FQ +GV G SG+H KL TS DG F F+ L G+ + F P+ ET++++ S+WPHPSF G FLP ER I GF A W+VPHLAR + Q+
Sbjct: 112 LHRSIFDVNVYTATLSVAGRFGVSNIAEVAPDAISVRWQDATFALALSDVAGLKEAATLAINGRDTLPFQPSLGVPGTNLSGIHAKLAGATSAASGDGPLQAFQFHAELHFTGSSSINFAPAARETRVELASDWPHPSFGGAFLPIERTIKADGFSAKWRVPHLARSVPQS 282
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: A0A2V8TQB7_9BACT (Cell envelope integrity protein CreD n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A2V8TQB7_9BACT) HSP 1 Score: 124 bits (310), Expect = 3.060e-30 Identity = 64/162 (39.51%), Postives = 91/162 (56.17%), Query Frame = 1
Query: 7 RGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQIGDQTSRFQAGVGVKGQRSSGVHIKLTSG-QLNDGFAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARGMGQA 489
RGI+ VPVY+ K+ G+F DL ++ ++R + A V +SD R I++ TD+ +T F G G +G+H LT G GF F F L +NG+ + P G ET + + SNWPHPSF GN+LP +R ++ GFEA+W +P L R QA
Sbjct: 116 RGIFSVPVYHLKLEVSGRFAKPDLAEWNVPAADIRWDRAEIGVGISDARAIQERTDLIWNGRTIPFLPGTGAFSLTDTGIHAPLTGGGPPASGFEFKFPLVLNGSVGVYLVPFGRETSVSLRSNWPHPSFQGNWLPAKRAVTDHGFEASWSIPFLGRNYPQA 277
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: A0A847HMB0_9BACT (Cell envelope integrity protein CreD n=1 Tax=Candidatus Riflebacteria bacterium TaxID=2053586 RepID=A0A847HMB0_9BACT) HSP 1 Score: 121 bits (304), Expect = 2.130e-29 Identity = 57/156 (36.54%), Postives = 86/156 (55.13%), Query Frame = 1
Query: 7 RGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQIGDQTSRFQAGVGVKGQRSSGVHIKLTSGQLNDGFAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLAR 474
RGIY VP+Y ++ + G F DL + + +++ N+ VSDVR + T ++ D FQ G G G+H+ L ND F+F+L + G+ L F P G +T++ ++ NWP PSF G +LP +RKI+ GF+A WQ+P L R
Sbjct: 116 RGIYKVPLYRAELEFSGGFSKPDLSTWAADPSDIQWNNCHLVFRVSDVRAVVSRTYLKWNDLKLEFQPGSGESAGNFPGIHVPLNESVFNDSNRFSFSLDLQGSDGLFFAPFGRDTRVVLSGNWPDPSFKGQWLPKDRKITAEGFQAQWQIPFLGR 271
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: A0A150XSB2_ROSEK (Uncharacterized protein n=4 Tax=Roseivirga TaxID=290180 RepID=A0A150XSB2_ROSEK) HSP 1 Score: 120 bits (302), Expect = 4.250e-29 Identity = 59/161 (36.65%), Postives = 93/161 (57.76%), Query Frame = 1
Query: 4 QRGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQIGDQTSRFQAGVGVKGQRSSGVHIKLTSGQLNDGFAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARGMGQ 486
+RGIY+V VYN++++ +G+F+ D ++ E + ++A S+ + D+ GI+ +Q G+ T R +G+ V+ SSGV+ K+ + F+F+L +NGT+ L F P G T + + S WPHPSF G FLP+ I+ GF A W V L R Q
Sbjct: 114 KRGIYEVIVYNSELSAEGQFEALDFSNFQVEEESILWSEAFVSIGIPDMAGIQSDIQIQFGENTYRAGSGIPVQDLLSSGVNSKVAIDSESKSIPFSFDLNINGTESLSFNPIGKTTNISLASTWPHPSFGGQFLPDSYNITDNGFTAEWSVFDLNRNYPQ 274
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: A0A2H0IUI7_9BACT (Cell envelope integrity protein CreD n=1 Tax=Cytophagales bacterium CG12_big_fil_rev_8_21_14_0_65_40_12 TaxID=1973954 RepID=A0A2H0IUI7_9BACT) HSP 1 Score: 120 bits (300), Expect = 8.110e-29 Identity = 62/175 (35.43%), Postives = 97/175 (55.43%), Query Frame = 1
Query: 4 QRGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQIGDQTSRFQAGVGVKGQRSSGVHIKLTSGQLNDGFAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARGMGQAHTQTHINKLMSKN 528
+RGIY+V VYNT++ +G FD D D + ++ +A S+ + D+ GI+ ++ + T + + G+ V SSGV+ K+ + F+ +L +NGTK L F P G T + + SNWPHPSF G FLP++ +I+ GF A W V L R Q H + +K+ + N
Sbjct: 114 KRGIYEVIVYNTQLKLEGNFDEIDFDDFHINESQILWEEAFVSIGIPDMSGIQSAIPLKFNNDTYKTEPGIPVSDLVSSGVNAKVNLTKPEKAIPFSVSLNINGTKSLSFLPLGKNTNVQINSNWPHPSFDGQFLPDDYEINKEGFTAKWSVFDLNRNYPQ-HWEGQNHKIKTSN 287
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: A0A1E5T6P2_9BACT (Uncharacterized protein n=1 Tax=Roseivirga misakiensis TaxID=1563681 RepID=A0A1E5T6P2_9BACT) HSP 1 Score: 119 bits (299), Expect = 1.410e-28 Identity = 63/187 (33.69%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 4 QRGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQIGDQTSRFQAGVGV-------------------KGQRSSGVHIKLTSGQLNDGFAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARG-----MGQAH 492
+RGIY+V VY+T + +G FD DL Q+ + + ++AV S+ + D+RGI+ Q+G +T R ++G+ +GQ+ +GV+ ++ ++ F+ +L + GTK L+F P G T + + S+WPHPSF G FLP++ +I+ GF ANW V L R +G+AH
Sbjct: 114 KRGIYEVIVYSTDLKLNGSFDQIDLTQFTNQPENILWDEAVLSIGIPDMRGIQADVQFQLGKKTHRMESGIPAYLELNLAQSEPRIDYHVDRQGQKQTGVNARIKIDPKSEKMDFSVDLDIRGTKTLMFNPVGKSTNVKIESSWPHPSFTGQFLPDDYEITEKGFTANWSVFDLNRNYPQQWVGKAH 300
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Match: A0A8J7Z3G8_9CYAN (Cell envelope integrity protein CreD n=1 Tax=Myxacorys almedinensis A TaxID=2690445 RepID=A0A8J7Z3G8_9CYAN) HSP 1 Score: 117 bits (293), Expect = 8.490e-28 Identity = 59/160 (36.88%), Postives = 86/160 (53.75%), Query Frame = 1
Query: 7 RGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVRGIKKTTDVQIGDQTSRFQAGVGVKGQRSSGVHIKLTSGQLNDGFAFNFNLPVNGTKHLLFEPSGAETKLDMTSNWPHPSFMGNFLPNERKISTTGFEANWQVPHLARGMGQ 486
RGI++VPVY TK+ G+F D + ++ + A S+ +SD I+ + +T F AG G G G+H L D FAF+ + VNG++ + F P G TK+ +TS+W +PSF G +LPNER I+ GF+A W +P L R Q
Sbjct: 106 RGIFEVPVYKTKLDLRGRFVRPDFTTWGTRPEDILWDRAELSLQISDAHAIQNQASLGWNQKTIPFTAGQGKYGSNEQGIHAVLKDAMQADTFAFSIPITVNGSEKIAFAPFGKVTKVSLTSDWTNPSFQGVWLPNERSITQKGFDATWNIPSLGRNYPQ 265 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120836.4288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120836.4288.1 >prot_M-pyrifera_M_contig120836.4288.1 ID=prot_M-pyrifera_M_contig120836.4288.1|Name=mRNA_M-pyrifera_M_contig120836.4288.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp LQRGIYDVPVYNTKVTYDGKFDPADLDQYRRERFELRVNDAVFSVLVSDVback to top mRNA from alignment at M-pyrifera_M_contig120836:2..535- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120836.4288.1 ID=mRNA_M-pyrifera_M_contig120836.4288.1|Name=mRNA_M-pyrifera_M_contig120836.4288.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig120836:2..535- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120836:2..535- >mRNA_M-pyrifera_M_contig120836.4288.1 ID=mRNA_M-pyrifera_M_contig120836.4288.1|Name=mRNA_M-pyrifera_M_contig120836.4288.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig120836:2..535- (Macrocystis pyrifera P11B4 male)back to top |