mRNA_M-pyrifera_M_contig120780.4275.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0A7S4IA48_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IA48_9EUKA) HSP 1 Score: 139 bits (350), Expect = 1.830e-35 Identity = 72/140 (51.43%), Postives = 92/140 (65.71%), Query Frame = 1
Query: 1 DAFKVPDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGPIFHLLFGE---HSG------ERQQFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDSS 393
+ + VP++HQLT N+RSH L + +S++ LLE LFP ID +APD GT GP PS + +F LFG+ H G E +QFGA QV+I R+ + K LP+ LK LCLTV+EAKGLEFDDVILFNFF DS+
Sbjct: 774 EKYTVPEVHQLTVNFRSHSALIKLGNSIIKLLENLFPNTIDVIAPDQGTTPGPLPSIMKYSADEDLFAFLFGQAAQHGGDDGKLPEIEQFGAHQVVITRNQATKALLPDLLKHALCLTVYEAKGLEFDDVILFNFFSDSA 913
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0A078BAF5_STYLE (Lupus brain antigen n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078BAF5_STYLE) HSP 1 Score: 134 bits (338), Expect = 8.010e-34 Identity = 72/139 (51.80%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 7 FKVPDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGP-IFHLLFG--------EHSGERQQFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDSSC 396
F P + QL N+RSH ++ ++A+SVV L+E +FP+ IDKL +S DGPKP F+ + + LLF E G QFG QVIIVRD K+ LPE LK LCLTV+EAKGLEFDDVILFNFF+DS C
Sbjct: 670 FSAPSVLQLVKNFRSHSRILDLANSVVSLIELIFPKTIDKLMKESSDMDGPKPIFIDPAQSDEQLESLLFSKSFASQSSESVGNGPQFGCNQVIIVRDQESKHNLPEFLKSMLCLTVYEAKGLEFDDVILFNFFEDSKC 808
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0A1R2C2S6_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C2S6_9CILI) HSP 1 Score: 128 bits (322), Expect = 1.100e-31 Identity = 66/128 (51.56%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 16 PDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGPIFHLLFG---EHSGERQQFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDS 390
P I+QLT N+R+H Q+ MA+S+V LLE LFP+ IDK+A ++ DGP+P + + +F++LFG S + QFG QVIIVR K L L LCLTVFEAKGLEFDDV+L+NFF DS
Sbjct: 767 PKIYQLTMNFRTHNQILAMANSIVALLETLFPQTIDKMAKETSMIDGPRPKIISSSDHLHLFNVLFGFEKTQSVSQAQFGCNQVIIVRSQETKEKLHPLLSHALCLTVFEAKGLEFDDVVLYNFFTDS 894
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0A0V0R272_PSEPJ (p-loop containing nucleoside triphosphate hydrolase n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0R272_PSEPJ) HSP 1 Score: 127 bits (320), Expect = 2.130e-31 Identity = 70/148 (47.30%), Postives = 91/148 (61.49%), Query Frame = 1
Query: 1 DAFKVPDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFV--CGGEIGPIFHLLFGE-------HSGERQ---------QFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDS 390
DAFK P + QLT N+RSH ++ +A+S+V +E LFP+ IDKL + DGPKP + C E+ +F +L GE HS + +FG QVIIVR+ K LP+ L+ LCLTV+EAKGLEFDDVIL+NFF DS
Sbjct: 914 DAFKAPYVKQLTVNFRSHNRILELANSIVTTIEHLFPQTIDKLKKERSNIDGPKPIMIQECDPEL--LFFILIGEDQFKSAFHSQNKMGQMKNQQALEFGCNQVIIVRNQEAKKKLPQVLQHALCLTVYEAKGLEFDDVILYNFFSDS 1059
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0A7J8DDV8_MOLMO (UvrD-like helicase ATP-binding domain-containing protein n=1 Tax=Molossus molossus TaxID=27622 RepID=A0A7J8DDV8_MOLMO) HSP 1 Score: 126 bits (316), Expect = 7.200e-31 Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 10 KVPDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGPIFHLLFG-EHSGERQQFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDSS-CTAWAEV 414
K IHQL NYRSH + N+A VV LL+ FPE+ D+L DSG DGPKP+ + + + LL G + + +FGA QVI+V ++ K +PEEL+ L LTV+EAKGLEFDDV+L+NFF DS C++W+E+
Sbjct: 1501 KPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKPTVLESCSLSDLAILLQGNKRKTQPIEFGAHQVILVANEMAKEKIPEELELALVLTVYEAKGLEFDDVLLYNFFTDSEGCSSWSEL 1637
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0A7J8HXS9_ROUAE (Tetratricopeptide repeat and ankyrin repeat containing 1 n=5 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8HXS9_ROUAE) HSP 1 Score: 125 bits (315), Expect = 1.000e-30 Identity = 67/142 (47.18%), Postives = 89/142 (62.68%), Query Frame = 1
Query: 10 KVPDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGPIFHLLFG-EHSGERQQFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDSSC-TAWAEVGSVEP 429
K +HQL NYRSH + N+A VV LL+C FPE+ D+L DSG DGPKP+ + + + LL G + + +FGA QVI+V ++ K +PEEL+ L LTV+EAKGLEFDDV+L+NFF DS W + S P
Sbjct: 1525 KPKKVHQLYQNYRSHSGILNLASGVVDLLQCYFPESFDRLPRDSGLFDGPKPTVLESCSVSDLAILLRGNKRKTQPIEFGAHQVILVANEMAKEKIPEELELALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKIISSFTP 1666
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0A1R2C385_9CILI (UvrD-like helicase C-terminal domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C385_9CILI) HSP 1 Score: 125 bits (313), Expect = 1.800e-30 Identity = 69/128 (53.91%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 16 PDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGPIFHLLFG-EHSGERQ--QFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDS 390
P I QLT N+R+H Q+ MA+S+V LLE LFP+ IDK+A ++ DGP P + E +F++LFG E + R QFG QVIIVR+ K L L LCLTVFEAKGLEFDDVIL+NFF DS
Sbjct: 769 PIIFQLTMNFRTHNQVLAMANSIVALLETLFPQTIDKMAKETSMIDGPTPKIINSSENLHLFYVLFGFEKNLSRSDIQFGCNQVIIVRNQEAKEKLHPLLSHALCLTVFEAKGLEFDDVILYNFFTDS 896
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0BNC3_PARTE (UvrD-like helicase C-terminal domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BNC3_PARTE) HSP 1 Score: 125 bits (313), Expect = 1.850e-30 Identity = 62/140 (44.29%), Postives = 89/140 (63.57%), Query Frame = 1
Query: 22 IHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGPIFHLLFGEHSGERQ--QFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDSSCTA--WAEVGSVEP 429
I L+ N+RSH Q+ +A+SV+ ++E FP+ IDKL ++ GPKP + ++G + + L S ++ +FG QVIIV+D K LP EL+ LCLT++EAKGLEFDDVILFNFF DS+ + W + +EP
Sbjct: 760 IFDLSINFRSHNQILQLANSVIRMIEIFFPQKIDKLNKETSNLQGPKPIIIKSDDVGQLLNNLCDFFSNDKNTVEFGCNQVIIVKDQESKTRLPIELQNVLCLTIYEAKGLEFDDVILFNFFHDSTASIEDWQSLNDLEP 899
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: UPI00064C093C (TPR and ankyrin repeat-containing protein 1 n=2 Tax=Ochotona TaxID=9977 RepID=UPI00064C093C) HSP 1 Score: 124 bits (312), Expect = 2.550e-30 Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 1
Query: 10 KVPDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGPIFHLLFG-EHSGERQQFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDS-SCTAWAEVGSVEP 429
K IHQL NYRSH + N+A VV LL+ FPE+ D+L DSG DGPKP+ + + + LL G + + +FGA QVI+V ++ K +PEEL L LTV+EAKGLEFDDV+L+NFF DS +C W + S P
Sbjct: 1676 KPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKPTVLESCSVSDLAILLRGNKRKTQPIEFGAHQVILVANEMAKEKIPEELGLALVLTVYEAKGLEFDDVLLYNFFTDSEACKEWKIISSFTP 1817
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Match: A0A2R8Y890_HUMAN (TPR and ankyrin repeat-containing protein 1 (Fragment) n=1 Tax=Homo sapiens TaxID=9606 RepID=A0A2R8Y890_HUMAN) HSP 1 Score: 123 bits (309), Expect = 4.340e-30 Identity = 65/137 (47.45%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 10 KVPDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRDGPKPSFVCGGEIGPIFHLLFG-EHSGERQQFGAKQVIIVRDDSCKNTLPEELKPCLCLTVFEAKGLEFDDVILFNFFKDSS-CTAWAEV 414
K IHQL NYRSH + N+A VV LL+ FPE+ D+L DSG DGPKP+ + + + LL G + + +FGA QVI+V +++ K +PEEL L LT++EAKGLEFDDV+L+NFF DS C +W+++
Sbjct: 476 KPKKIHQLYQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKPTVLESCSVSDLAILLRGNKRKTQPIEFGAHQVILVANETAKEKIPEELGLALVLTIYEAKGLEFDDVLLYNFFTDSEGCPSWSKL 612 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120780.4275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120780.4275.1 >prot_M-pyrifera_M_contig120780.4275.1 ID=prot_M-pyrifera_M_contig120780.4275.1|Name=mRNA_M-pyrifera_M_contig120780.4275.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp DAFKVPDIHQLTTNYRSHRQLHNMAHSVVHLLECLFPEAIDKLAPDSGTRback to top mRNA from alignment at M-pyrifera_M_contig120780:40..468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120780.4275.1 ID=mRNA_M-pyrifera_M_contig120780.4275.1|Name=mRNA_M-pyrifera_M_contig120780.4275.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig120780:40..468+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120780:40..468+ >mRNA_M-pyrifera_M_contig120780.4275.1 ID=mRNA_M-pyrifera_M_contig120780.4275.1|Name=mRNA_M-pyrifera_M_contig120780.4275.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig120780:40..468+ (Macrocystis pyrifera P11B4 male)back to top |