mRNA_M-pyrifera_M_contig120733.4267.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: A0A7S4MGY9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MGY9_9EUKA) HSP 1 Score: 131 bits (330), Expect = 4.000e-35 Identity = 62/86 (72.09%), Postives = 68/86 (79.07%), Query Frame = 1
Query: 1 MPFVAP--ARTLCTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVASVTDQSAMKAPK 252
MPFV C KC KTVYPNE+IRAANGTYHKGCL+CT CN+TLNLKTC+SH+SKPYC H P VGHTQVASV +SAM APK
Sbjct: 1 MPFVPNDGKANKCAKCAKTVYPNEAIRAANGTYHKGCLRCTQCNITLNLKTCMSHQSKPYCNTHVPKVGHTQVASVEMKSAMSAPK 86
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: A0A6B2LTV0_9EUKA (LIM zinc-binding domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LTV0_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 2.050e-19 Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 1
Query: 31 CTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVAS-VTDQSAMKA 246
C C KTVYPNE+++A + ++HK CLKC VC +TL+L S E KPYC+ H PTV HT VA V Q A A
Sbjct: 5 CQGCGKTVYPNEAVKACDVSWHKACLKCEVCKMTLSLSNLTSFEKKPYCKTHVPTVKHTTVADDVLSQHAKAA 77
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: UPI00064502B4 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064502B4) HSP 1 Score: 83.6 bits (205), Expect = 4.200e-18 Identity = 44/79 (55.70%), Postives = 50/79 (63.29%), Query Frame = 1
Query: 19 ARTLCTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVA-SVTDQSAMKAPK 252
A C CNKT YP ESI A TYHKGC KC+VCN+TLN+K E K YC VH PT T VA SV ++A+ APK
Sbjct: 3 AAVKCGICNKTAYPLESIVALEKTYHKGCFKCSVCNITLNVKNFKGLEGKLYCAVHTPTQKATAVADSVAMKTALNAPK 81
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: A0A8J4UZG3_9MYCE (LIM zinc-binding domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UZG3_9MYCE) HSP 1 Score: 83.2 bits (204), Expect = 7.670e-18 Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 31 CTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVA-SVTDQSAMKAPK 252
C CNKT YP ESI A + +YHK C KC+VCN+TLN+K E K YC VH P TQVA SV ++A+ APK
Sbjct: 7 CASCNKTAYPLESIVALDSSYHKACFKCSVCNMTLNVKNFKGLEGKLYCAVHTPKATATQVADSVAIKNALNAPK 81
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: UPI001E1D3ECA (LIM zinc-binding domain-containing Nebulette-like isoform X1 n=13 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3ECA) HSP 1 Score: 83.6 bits (205), Expect = 5.170e-17 Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 28 LCTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVASVTD 228
LC +CNKTVYP E ++ + T+HKGC KC VCN+TLN+K +E PYC H P HT VA +
Sbjct: 5 LCGRCNKTVYPTEELKCLDKTWHKGCFKCQVCNMTLNMKNYKGYEKLPYCNAHYPQTKHTAVADTPE 71
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: UPI000A2A9060 (LIM and SH3 domain protein F42H10.3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9060) HSP 1 Score: 80.1 bits (196), Expect = 1.010e-16 Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 1
Query: 28 LCTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVASVTD 228
LC KC K VYP E + +HKGC KCTVCN+TLNLK + PYC+ H PT HT+VA +
Sbjct: 4 LCAKCAKIVYPVEKFNCLDKIWHKGCFKCTVCNMTLNLKNYKGYNRYPYCQAHYPTTRHTEVADTVE 70
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: A0A152A8Q0_9MYCE (LIM-type zinc finger-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A8Q0_9MYCE) HSP 1 Score: 76.3 bits (186), Expect = 3.200e-15 Identity = 40/79 (50.63%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 19 ARTLCTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVA-SVTDQSAMKAPK 252
A C C KT YP ESI A + +YHKGC KC+VCN+TLN+K E K YC VH P T V SV ++A+ APK
Sbjct: 3 ASNKCAVCAKTAYPLESIVALDKSYHKGCFKCSVCNVTLNVKNFKGLEGKIYCAVHTPKQTATAVTDSVAIKNALNAPK 81
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: A0A6P8IDY0_ACTTE (LIM and SH3 domain protein Lasp-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IDY0_ACTTE) HSP 1 Score: 75.9 bits (185), Expect = 7.720e-15 Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 31 CTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVASVTD 228
C+KC+K VYP E + + +HK C KCTVCN+TLN+K + PYC H PT HT VA +
Sbjct: 5 CSKCSKAVYPMEKLNCLDKFWHKTCFKCTVCNMTLNMKNYKGYNKMPYCAAHYPTTKHTTVADTPE 70
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: A0A0L0D2D8_THETB (Transcription factor lim1 n=2 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D2D8_THETB) HSP 1 Score: 77.0 bits (188), Expect = 1.200e-14 Identity = 38/75 (50.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 31 CTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVASVTD-QSAMKAPK 252
C C KT YP ES+RA + T+HK CLKC+ C ++LNLKT S YC+VH P T VA D Q A APK
Sbjct: 6 CPVCTKTAYPMESVRALSKTFHKACLKCSTCGMSLNLKTIESEGGVLYCKVHLPKATATSVADSVDVQRATSAPK 80
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Match: UPI000719A7D0 (LIM and SH3 domain protein Lasp-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719A7D0) HSP 1 Score: 76.3 bits (186), Expect = 1.250e-14 Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 31 CTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCISHESKPYCRVHKPTVGHTQVASVTD 228
C KC KTVYP E ++ + T+HK C KCTVCN+TLN+K ++ PYC H P+ T +A +
Sbjct: 5 CDKCLKTVYPTEELKCLDKTWHKACFKCTVCNMTLNMKNYKGYDKHPYCNAHYPSTKFTPIADTPE 70 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120733.4267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120733.4267.1 >prot_M-pyrifera_M_contig120733.4267.1 ID=prot_M-pyrifera_M_contig120733.4267.1|Name=mRNA_M-pyrifera_M_contig120733.4267.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp MPFVAPARTLCTKCNKTVYPNESIRAANGTYHKGCLKCTVCNLTLNLKTCback to top mRNA from alignment at M-pyrifera_M_contig120733:195..446+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120733.4267.1 ID=mRNA_M-pyrifera_M_contig120733.4267.1|Name=mRNA_M-pyrifera_M_contig120733.4267.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig120733:195..446+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120733:195..446+ >mRNA_M-pyrifera_M_contig120733.4267.1 ID=mRNA_M-pyrifera_M_contig120733.4267.1|Name=mRNA_M-pyrifera_M_contig120733.4267.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig120733:195..446+ (Macrocystis pyrifera P11B4 male)back to top |