mRNA_M-pyrifera_M_contig120728.4265.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A3C1KNQ7_9GAMM (Ribonucleoside-diphosphate reductase (Fragment) n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KNQ7_9GAMM) HSP 1 Score: 348 bits (892), Expect = 2.250e-115 Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL+QQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct: 240 NVVEINGLPLEQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 417
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A359EPC5_9GAMM (Ribonucleoside-diphosphate reductase n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A359EPC5_9GAMM) HSP 1 Score: 348 bits (892), Expect = 1.910e-110 Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL+QQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct: 748 NVVEINGLPLEQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 925
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A2E7C2N9_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=2 Tax=Haliea TaxID=475794 RepID=A0A2E7C2N9_9GAMM) HSP 1 Score: 332 bits (850), Expect = 1.530e-107 Identity = 167/178 (93.82%), Postives = 171/178 (96.07%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL QQRHEIAYKRRHGMGFLGLGSTITMLGM YGDEDSL FTEEVAREMALVGWEQ VQLAEEKGPAPIMDDLFEVTPEMLAARPEM+RDGIAVG+RLPGRVLHARYSRYMQRVA APELVER+AERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct: 373 NVVEINGLPLAQQRHEIAYKRRHGMGFLGLGSTITMLGMSYGDEDSLAFTEEVAREMALVGWEQAVQLAEEKGPAPIMDDLFEVTPEMLAARPEMRRDGIAVGERLPGRVLHARYSRYMQRVAEAAPELVERIAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 550
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A2N5Y7V7_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y7V7_9GAMM) HSP 1 Score: 303 bits (776), Expect = 1.630e-96 Identity = 149/178 (83.71%), Postives = 166/178 (93.26%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VV+ NGLPL+QQ+HEI YKRRHGMGFLGLGSTITML MCYGD+ SL FTE+VAREMALVGW+QG++LA EKGPAPIM+DLFEVTPEMLA RP+M RDGIAVGD++PG+VL ARYS YMQRVA VAPELVE++A +GARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct: 373 NVVDINGLPLEQQQHEITYKRRHGMGFLGLGSTITMLRMCYGDDASLEFTEQVAREMALVGWQQGIELAAEKGPAPIMEDLFEVTPEMLATRPDMVRDGIAVGDQVPGKVLLARYSHYMQRVAEVAPELVEQLASKGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 550
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A3C7VW87_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C7VW87_9GAMM) HSP 1 Score: 301 bits (771), Expect = 9.420e-96 Identity = 148/178 (83.15%), Postives = 162/178 (91.01%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL++QRHEI YKRRHGMGFLGLGST+TMLGM YGDE+S+ FTE VA+EMAL GWEQ +LAEEKGPAPIMDD FEVTP M+ ARPEM RDGI VGD+LPGRVLHARYSRYMQRVA VAP+LV+++A GARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct: 375 NVVEINGLPLEEQRHEITYKRRHGMGFLGLGSTLTMLGMRYGDEESVAFTERVAKEMALAGWEQAAELAEEKGPAPIMDDEFEVTPAMMDARPEMARDGIKVGDKLPGRVLHARYSRYMQRVAEVAPQLVDKLAANGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 552
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A095VTS6_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=2 Tax=Bacteria TaxID=2 RepID=A0A095VTS6_9GAMM) HSP 1 Score: 295 bits (755), Expect = 2.140e-93 Identity = 145/178 (81.46%), Postives = 162/178 (91.01%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL++QRHEI YKRRHGMGFLGLGST+TMLGM YGD++S+ FTE VAREMA+ GWEQ +LA+EKGPAPIMDD F VT ML ARPEM RDGI VGD++PGRVLHARYSRYMQR+A VAP+LV+R+AE+GARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct: 373 NVVEINGLPLEEQRHEITYKRRHGMGFLGLGSTLTMLGMRYGDDESVAFTERVAREMAISGWEQAAELADEKGPAPIMDDEFVVTTAMLDARPEMARDGIKVGDKVPGRVLHARYSRYMQRMAEVAPQLVDRLAEQGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 550
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A661BLS3_9GAMM (Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BLS3_9GAMM) HSP 1 Score: 275 bits (703), Expect = 3.230e-89 Identity = 135/178 (75.84%), Postives = 156/178 (87.64%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL QRHEI +KRRHGMG+LGLGST+TML M YGD+DSL FTE+V RE+A+VGWE ++LAEEKGPAPIM++ F VTPEMLA RPEM DG+ VG+R+ G+VLHARYSRYMQ +A PELVER+AE GAR+THHSSIAPTGTISLSLANNASNG+EPSFAHHY+RNVIR
Sbjct: 56 NVVEINGLPLAPQRHEIEHKRRHGMGYLGLGSTVTMLRMKYGDQDSLEFTEKVTRELAMVGWEAALELAEEKGPAPIMNEEFTVTPEMLAKRPEMANDGLRVGERVKGKVLHARYSRYMQLIAKENPELVERLAEVGARYTHHSSIAPTGTISLSLANNASNGVEPSFAHHYSRNVIR 233
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A0K0XWC6_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Wenzhouxiangella marina TaxID=1579979 RepID=A0A0K0XWC6_9GAMM) HSP 1 Score: 283 bits (723), Expect = 1.170e-88 Identity = 141/178 (79.21%), Postives = 157/178 (88.20%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL+QQR EI YKRRHGMGFLGLGST+TML M YG DSL FTE VAREMA+ GWE G++LAEEKGPAPIM+D FEVT +ML RPEM+ DG VGD++PGRVLHARYSRYM++VA VAPELVE++AE GARFTHH+SIAPTGTISLSLANNASNGIEPSFAHHY RNVIR
Sbjct: 372 NVVEINGLPLEQQRKEIEYKRRHGMGFLGLGSTVTMLRMKYGQADSLEFTERVAREMAVAGWEVGLELAEEKGPAPIMNDEFEVTAQMLRQRPEMKADGFQVGDKVPGRVLHARYSRYMRKVAEVAPELVEKLAETGARFTHHTSIAPTGTISLSLANNASNGIEPSFAHHYNRNVIR 549
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A5Q4GCU6_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Wenzhouxiangellaceae bacterium TaxID=2448046 RepID=A0A5Q4GCU6_9GAMM) HSP 1 Score: 281 bits (719), Expect = 4.560e-88 Identity = 141/178 (79.21%), Postives = 155/178 (87.08%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL++QR EI YKRRHGMGFLGLGST+TML YG DSL FTE VAREMA+ GWE ++LAEEKGPAPIM D FEVTP+ML RPEM RDG GDR+PGR+LHARYSRYMQ+VAAVAPELV+R+AE GARFTHH+SIAPTGTISLSLANNASNGIEPSFAHHY RNVIR
Sbjct: 372 NVVEINGLPLEKQRREIEYKRRHGMGFLGLGSTLTMLRKQYGQGDSLEFTERVAREMAVAGWEVALELAEEKGPAPIMSDDFEVTPQMLRLRPEMLRDGYQPGDRVPGRILHARYSRYMQKVAAVAPELVDRLAETGARFTHHTSIAPTGTISLSLANNASNGIEPSFAHHYNRNVIR 549
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A382TRE5_9ZZZZ (RIBORED_LARGE domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382TRE5_9ZZZZ) HSP 1 Score: 268 bits (686), Expect = 6.130e-88 Identity = 133/178 (74.72%), Postives = 151/178 (84.83%), Query Frame = 1
Query: 1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 534
+VVE NGLPL +Q+ EI KRRHGMG+LGLGSTITMLGM YGDEDS+ FTEEV + +ALVGW+ G+ LAEEKGPA IMD+ FEVT EML RPEM DG GD + GRVLHARYSRYMQ++A PELVE++AE+G RFTHH+SIAPTGTISLSLANNASNGIEPSFAHHY+RNVIR
Sbjct: 36 NVVEINGLPLPEQQSEIERKRRHGMGYLGLGSTITMLGMSYGDEDSVAFTEEVTKRLALVGWQAGLALAEEKGPAAIMDEDFEVTQEMLRLRPEMSEDGYQAGDSVKGRVLHARYSRYMQKIATEDPELVEQLAEKGCRFTHHTSIAPTGTISLSLANNASNGIEPSFAHHYSRNVIR 213 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120728.4265.1 >prot_M-pyrifera_M_contig120728.4265.1 ID=prot_M-pyrifera_M_contig120728.4265.1|Name=mRNA_M-pyrifera_M_contig120728.4265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTback to top mRNA from alignment at M-pyrifera_M_contig120728:3..536+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120728.4265.1 ID=mRNA_M-pyrifera_M_contig120728.4265.1|Name=mRNA_M-pyrifera_M_contig120728.4265.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig120728:3..536+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120728:3..536+ >mRNA_M-pyrifera_M_contig120728.4265.1 ID=mRNA_M-pyrifera_M_contig120728.4265.1|Name=mRNA_M-pyrifera_M_contig120728.4265.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig120728:3..536+ (Macrocystis pyrifera P11B4 male)back to top |