mRNA_M-pyrifera_M_contig120651.4253.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A482S3B6_9ARCH (Acyl_transf_3 domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3B6_9ARCH) HSP 1 Score: 76.6 bits (187), Expect = 5.920e-15 Identity = 60/158 (37.97%), Postives = 78/158 (49.37%), Query Frame = 1
Query: 1 VDMDALTGLRGVVALHIVVFHSVLFS-VGWDWQGSAEMPWFFLLSGFCLAVVYGALPVRG-------------GCGWRE----KEISCWKFLWNRGVRVMPTTWLTHALAAPLSWFGYGDVSPL--FRTTAVIFSIVPLSTATIILPVFN--GPAWTV 408
VD+ GLRG++A+ ++VFH V+FS D QGS+ MP F +LSGF L V YG V G R K + KF NR VR++P +L A PL GYG SP + ++I S +PL T I L + GP WTV
Sbjct: 2 VDLQGQHGLRGLLAVWVMVFHCVIFSKCPVDLQGSSLMPMFIMLSGFSLTVAYGKKDVAEYQQVESYYHEEGQSDGVRHNVARKPLDFIKFYHNRLVRLIPVYYLCSLSAIPLWLAGYGSASPHSDYFLMSIISSFLPLCTFFIFLAGSSLVGPGWTV 159
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A0G4G4R9_9ALVE (Acyl_transf_3 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G4R9_9ALVE) HSP 1 Score: 79.3 bits (194), Expect = 7.910e-15 Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 4 DMDALTGLRGVVALHIVVFHSVLF----SVGWDWQGSAEMPWFFLLSGFCLAVVYGALPVRGGCGWREKEISCWKFLWNRGVRVMPTTWLTHALAAPLSWFGYGDVSPLFRTTAVIFSIVPLSTATIILPVFNGPAWTV 408
++D L+GLRG+ A++I++ H +LF SV +MP+FFLLSGFCLA RGG G W F W R RV PT LT+ LA PL + GY D P + ++ +T + + + N +WT+
Sbjct: 35 NLDTLSGLRGLCAVYIMIGHGLLFCTASSVLPRLFVPVQMPFFFLLSGFCLATANDR-SARGGEG---AHFDYWNFHWKRFARVYPTYILTNLLAVPLVFSGYTDAKPPSWPRMIPLALTCTATWGLFVHIPNVASWTI 169
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A7S1XLF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLF3_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.030e-14 Identity = 52/135 (38.52%), Postives = 67/135 (49.63%), Query Frame = 1
Query: 1 VDMDALTGLRGVVALHIVVFHSVLFS-VGWDWQGSAEMPWFFLLSGFCLAVVYGALPVR-----------GGCGWREK------------------EISCWKFLWNRGVRVMPTTWLTHALAAPLSWFGYGDVSP 315
VDM TGLRGV A+ I+VFH ++FS D+QGS+ MP F +LSGF LAVVYGA P++ G C K E +F+ NR RV P +L +A PL++ GY P
Sbjct: 47 VDMTTHTGLRGVAAIWIMVFHCIIFSDAQLDFQGSSIMPLFIMLSGFSLAVVYGARPMKLTDRGTGVCCCGPCSTDPKIENPNIVNGREFRNDVLPEFHWSRFMQNRLARVGPVYYLGLLIALPLAYVGYNTSVP 181
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A7S2QUT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUT0_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.040e-9 Identity = 37/83 (44.58%), Postives = 46/83 (55.42%), Query Frame = 1
Query: 1 VDMDALTGLRGVVALHIVVFHSVLFSVGWDWQGSAEMPWFFLLSGFCLAVVYGALPVRGGCGWREKEISCWKFLWNRGVRVMP 249
VD DALTGLRG ALHI++ H F+ G D G A M +F+LLSGF + V YG W + FL NR R++P
Sbjct: 25 VDTDALTGLRGATALHIMLGHYSGFNYGIDGLGGASMSFFYLLSGFVMTVAYGKKSTDPTKPWLPFKYGT--FLRNRFARLLP 105
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A812YWS0_9DINO (MdmB protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812YWS0_9DINO) HSP 1 Score: 58.9 bits (141), Expect = 1.930e-7 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 1 VDMDALTGLRGVVALHIVVFHSVLFS-VGWDWQGSAEMPWFFLLSGFCLAVVYGALPVRGGCGWREKEISCWKFLWNRGVRVMPTTWLTHAL 273
VD ALTGLRG+ ALH+ H + S + D G A M +F+LLSGF + + Y V GG R + + +F NR R+ P LT+AL
Sbjct: 22 VDTLALTGLRGLAALHVAFGHYIAGSPIHVDLIGGASMSFFYLLSGFVMTLGYAKDLVAGGESSRIADFNKRRFWRNRFARLFPMYVLTNAL 113
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A812X343_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812X343_SYMMI) HSP 1 Score: 58.2 bits (139), Expect = 3.250e-7 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 1 VDMDALTGLRGVVALHIVVFHSVLFS-VGWDWQGSAEMPWFFLLSGFCLAVVYGALPVRGGCGWREKEISCWKFLWNRGVRVMPTTWLTHAL 273
VD ALTGLRG+ ALH+ H + S + D G A M +F+LLSGF + + Y V GG R + + +F NR R+ P LT+AL
Sbjct: 57 VDTLALTGLRGLAALHVAFGHYIAGSPLHVDLIGGASMSFFYLLSGFVMTLGYAKDLVAGGESSRIADFNKSRFWRNRFARLFPMYVLTNAL 148
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A813CSW6_9DINO (MdmB protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813CSW6_9DINO) HSP 1 Score: 58.2 bits (139), Expect = 3.650e-7 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 1 VDMDALTGLRGVVALHIVVFHSVLFS-VGWDWQGSAEMPWFFLLSGFCLAVVYGALPVRGGCGWREKEISCWKFLWNRGVRVMPTTWLTHAL 273
VD ALTGLRG+ ALH+ H + S + D G A M +F+LLSGF + + Y V GG R + + +F NR R+ P LT+AL
Sbjct: 22 VDTLALTGLRGLAALHVAFGHYIAGSPLHVDLIGGASMSFFYLLSGFVMTLGYAKDLVAGGESSRIADFNKSRFWRNRFARLFPMYVLTNAL 113
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A1Q9ER67_SYMMI (Acyl_transf_3 domain-containing protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9ER67_SYMMI) HSP 1 Score: 58.2 bits (139), Expect = 3.680e-7 Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 1
Query: 1 VDMDALTGLRGVVALHIVVFHSVLFS-VGWDWQGSAEMPWFFLLSGFCLAVVYGALPVRGGCGWREKEISCWKFLWNRGVRVMPTTWLTHAL 273
VD ALTGLRG+ ALH+ H + S + D G A M +F+LLSGF + + Y V GG R + + +F NR R+ P LT+AL
Sbjct: 416 VDTLALTGLRGLAALHVAFGHYIAGSPLHVDLIGGASMSFFYLLSGFVMTLGYAKDLVAGGESSRIADFNKSRFWRNRFARLFPMYVLTNAL 507
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: A0A8J3QST8_9ACTN (Acyl_transf_3 domain-containing protein n=1 Tax=Rugosimonospora africana TaxID=556532 RepID=A0A8J3QST8_9ACTN) HSP 1 Score: 56.2 bits (134), Expect = 1.450e-6 Identity = 42/146 (28.77%), Postives = 63/146 (43.15%), Query Frame = 1
Query: 7 MDALTGLRGVVALHIVVFHSVLFS------------VGWDWQGSAEMPWFFLLSGFCLAVVYGALPVRGGCGWREKEISCWKFLWNRGVRVMPTTWLTHALAAPLSWFGYGDVSPLFRTTAVIFSIVPLSTATIILPVFNGPAWTV 408
M L GLRG+ AL++V+FH L + +GW G + +FF+LSGF LA+ G GWR I +F R R++P W A + ++W T + PL + P+ NG W++
Sbjct: 1 MAGLAGLRGLAALYVVLFHCWLLTFPGFPADHGPRWLGWLLYGHLAVVFFFVLSGFSLAIS------PAGDGWRLGGIL--RFARRRAWRILPPYWAALAFSLVIAWTVTPQPHSGPPTARTLLVYGPLLQDIVTAPLPNGAFWSI 138
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Match: UPI00055A2417 (acyltransferase n=1 Tax=Muricauda sp. MAR_2010_75 TaxID=1250232 RepID=UPI00055A2417) HSP 1 Score: 52.0 bits (123), Expect = 4.320e-5 Identity = 40/117 (34.19%), Postives = 59/117 (50.43%), Query Frame = 1
Query: 7 MDALTGLRGVVALHIVVFH--SVLFSVGWDW-----------QGSAEMPWFFLLSGFCLAVVYGALPVRGGCGWREKEISCWKFLWNRGVRVMPT---TWLTHALAAPLSWFGYGDV 309
+DALT LRG+ A+ +VV+H + G D+ +G + +FFLLSGF LA VYG + G + + WK+LW R R+ P LTH + A + G+ +V
Sbjct: 7 IDALTPLRGIAAIWVVVYHYDQLTTFTGLDYLVSPKTTLLLSKGYLFVDFFFLLSGFILAHVYGE-RFQNGINLK----NAWKYLWARFSRLYPLHIFCLLTHIVVAIVLVIGFPNV 118 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120651.4253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120651.4253.1 >prot_M-pyrifera_M_contig120651.4253.1 ID=prot_M-pyrifera_M_contig120651.4253.1|Name=mRNA_M-pyrifera_M_contig120651.4253.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=134bp MDALTGLRGVVALHIVVFHSVLFSVGWDWQGSAEMPWFFLLSGFCLAVVYback to top mRNA from alignment at M-pyrifera_M_contig120651:2..463- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120651.4253.1 ID=mRNA_M-pyrifera_M_contig120651.4253.1|Name=mRNA_M-pyrifera_M_contig120651.4253.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig120651:2..463- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120651:2..463- >mRNA_M-pyrifera_M_contig120651.4253.1 ID=mRNA_M-pyrifera_M_contig120651.4253.1|Name=mRNA_M-pyrifera_M_contig120651.4253.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig120651:2..463- (Macrocystis pyrifera P11B4 male)back to top |