mRNA_M-pyrifera_M_contig120642.4249.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: UPI001C3D80CD (vitamin B12-dependent ribonucleotide reductase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D80CD) HSP 1 Score: 307 bits (786), Expect = 4.550e-96 Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 1
Query: 1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 504
Q SACFILSVNDTMPSIQRWIA+ESEIFRGGSGAGVNLSRLR DGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPD+LEFVRCKA EE KAYALG+MGYDLGLNGDAWRSIQFQNANNS+RLTDDFF RV GE+WQTR V DGEV DEMPA
Sbjct: 174 QASACFILSVNDTMPSIQRWIASESEIFRGGSGAGVNLSRLRGDGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDILEFVRCKAHEEAKAYALGDMGYDLGLNGDAWRSIQFQNANNSVRLTDDFFRRVAAGENWQTRNVADGEVRDEMPA 341
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: UPI001C3E3FD3 (vitamin B12-dependent ribonucleotide reductase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3E3FD3) HSP 1 Score: 301 bits (772), Expect = 4.950e-94 Identity = 150/168 (89.29%), Postives = 155/168 (92.26%), Query Frame = 1
Query: 1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 504
Q SACFILSVNDTMPSIQRWIA+ESEIFRGGSGAGVNLSRLR+DGE LSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPD+LEFVRCKA EE KAYALGEMGYDLGLNGDAWRSIQFQNANNS+RLTDDFF R E G WQTR+V GEV EMPA
Sbjct: 175 QASACFILSVNDTMPSIQRWIASESEIFRGGSGAGVNLSRLRSDGEPLSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDILEFVRCKAHEEAKAYALGEMGYDLGLNGDAWRSIQFQNANNSVRLTDDFFRRAEAGGSWQTRYVASGEVQGEMPA 342
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A7X3UFR8_9BACT (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3UFR8_9BACT) HSP 1 Score: 219 bits (558), Expect = 2.680e-68 Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1
Query: 1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDW 456
QCSACFILSV+D+M SI W E IF+GGSGAGVNLSR+R+ E LS+GGQASGPVSFMR ADS AGSIKSGG TRRAAKMV+LD DHPDV+EF+ CKA EE+KAYALG+ G+D+ LNGDAW SIQFQNANNS+R+TDDF VE+ +W
Sbjct: 176 QCSACFILSVDDSMESILEWCKVEGMIFKGGSGAGVNLSRIRSSKEILSSGGQASGPVSFMRAADSVAGSIKSGGKTRRAAKMVVLDIDHPDVVEFIWCKANEERKAYALGDAGWDMTLNGDAWSSIQFQNANNSVRVTDDFLDAVEKDGEW 327
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: X0TPJ8_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0TPJ8_9ZZZZ) HSP 1 Score: 215 bits (547), Expect = 2.250e-67 Identity = 107/168 (63.69%), Postives = 133/168 (79.17%), Query Frame = 1
Query: 1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 504
QCSACFILS+ D+M SI W TE +IF+GGSG+G+NLSRLR+ E L+ GG ASGPVSFMR AD+ AG+IKSGG TRRAAKMVIL+ DHPD+ EF++CKA EE+KAYALG+ GYD+ L+GDAW SIQ+QNANNS+R++D+F + V +W TR+V GE A A
Sbjct: 87 QCSACFILSIEDSMDSILDWYRTEGKIFKGGSGSGINLSRLRSSRERLTAGGLASGPVSFMRGADAIAGTIKSGGKTRRAAKMVILNVDHPDIDEFIKCKAGEERKAYALGDCGYDVSLDGDAWVSIQYQNANNSVRVSDEFMSAVVEDREWWTRYVTTGEPAQRYDA 254
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A535D7G9_9CHLR (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535D7G9_9CHLR) HSP 1 Score: 215 bits (547), Expect = 3.200e-66 Identity = 110/166 (66.27%), Postives = 127/166 (76.51%), Query Frame = 1
Query: 7 SACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 504
SACFILSV D M SI W E IF+GGSG+GVN+SR+R+ E LS GG ASGPVSFMR ADS AGSIKSGG TRRAAKMV+LD DHPDV EFV CKA EE+KA+ALGEMGYD+ LNG+AWRSIQFQNANNS+R+TDDF + G++W DG + + A
Sbjct: 154 SACFILSVEDEMGSILDWFKNEGVIFKGGSGSGVNVSRIRSSREQLSGGGYASGPVSFMRGADSVAGSIKSGGTTRRAAKMVVLDADHPDVREFVWCKAKEEKKAWALGEMGYDMSLNGEAWRSIQFQNANNSVRVTDDFMKKAIAGQEWTLTARTDGATLETVNA 319
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A7C1J4J8_9BACT (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7C1J4J8_9BACT) HSP 1 Score: 223 bits (569), Expect = 3.430e-65 Identity = 111/168 (66.07%), Postives = 134/168 (79.76%), Query Frame = 1
Query: 1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 504
QCSACFILSV DTMPSI WI TE IF+GGSG+G+NLS +R+ E L+ GG ASGPVSFMR AD+ AG+IKSGG TRRAAKMV+L+ DHPDVLEF CKAVEEQKA+ALG G+D+ +NG+AW+SIQFQNANNSIR+TD+F VE W + V+ G+V + +PA
Sbjct: 149 QCSACFILSVEDTMPSILDWIKTEGMIFKGGSGSGINLSTIRSSREHLAGGGLASGPVSFMRGADATAGAIKSGGKTRRAAKMVVLNVDHPDVLEFANCKAVEEQKAWALGSTGFDMTINGEAWKSIQFQNANNSIRVTDEFMKAVEADGPWNLKEVKSGKVIETVPA 316
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A523YTV9_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A523YTV9_9CHLR) HSP 1 Score: 215 bits (547), Expect = 4.440e-65 Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = 1
Query: 1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVA 489
QCSACFILS+ D+M SI W TE +IF+GGSG+G+NLS +R+ E L+ GG ASGPVSFMR AD+ AG+IKSGG TRRAAKMVIL+ DHPD+ EF++CKA EE+KAYALG+ GYD+ L+GDAW SIQ+QNANNS+R++DDF V +WQTR+V GE A
Sbjct: 204 QCSACFILSIEDSMDSILEWYRTEGKIFKGGSGSGINLSSVRSSKERLTAGGLASGPVSFMRGADAIAGTIKSGGKTRRAAKMVILNVDHPDIDEFIKCKAGEERKAYALGDAGYDVSLDGDAWVSIQYQNANNSVRVSDDFMRAVVEDPEWQTRYVTTGEPA 366
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A535YFA6_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535YFA6_9CHLR) HSP 1 Score: 215 bits (547), Expect = 7.100e-65 Identity = 110/166 (66.27%), Postives = 127/166 (76.51%), Query Frame = 1
Query: 7 SACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 504
SACFILSV D M SI W E IF+GGSG+GVN+SR+R+ E LS GG ASGPVSFMR ADS AGSIKSGG TRRAAKMV+LD DHPDV EFV CKA EE+KA+ALGEMGYD+ LNG+AWRSIQFQNANNS+R+TDDF + G++W DG + + A
Sbjct: 154 SACFILSVEDEMGSILDWFKNEGVIFKGGSGSGVNVSRIRSSREQLSGGGYASGPVSFMRGADSVAGSIKSGGTTRRAAKMVVLDADHPDVREFVWCKAKEEKKAWALGEMGYDMSLNGEAWRSIQFQNANNSVRVTDDFMKKAIAGQEWTLTARTDGATLETVNA 319
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A535GTK4_9CHLR (HintN domain-containing protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535GTK4_9CHLR) HSP 1 Score: 215 bits (547), Expect = 9.570e-65 Identity = 110/166 (66.27%), Postives = 127/166 (76.51%), Query Frame = 1
Query: 7 SACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 504
SACFILSV D M SI W E IF+GGSG+GVN+SR+R+ E LS GG ASGPVSFMR ADS AGSIKSGG TRRAAKMV+LD DHPDV EFV CKA EE+KA+ALGEMGYD+ LNG+AWRSIQFQNANNS+R+TDDF + G++W DG + + A
Sbjct: 154 SACFILSVEDEMGSILDWFKNEGVIFKGGSGSGVNVSRIRSSREQLSGGGYASGPVSFMRGADSVAGSIKSGGTTRRAAKMVVLDADHPDVREFVWCKAKEEKKAWALGEMGYDMSLNGEAWRSIQFQNANNSVRVTDDFMKKAIAGQEWTLTARTDGATLETVNA 319
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A7W0LYF6_9ACTN (Vitamin B12-dependent ribonucleotide reductase (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0LYF6_9ACTN) HSP 1 Score: 210 bits (534), Expect = 4.580e-64 Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 1
Query: 1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVAD 492
QCSACFILSV DTM SI W E IFRGGSGAG+NLS +R E LS GG ASGPVSFMR ADS AG+IKSGG TRRAAKMV+LD DHPD+L+FV CKA EE+KA AL + G+D+ ++GD + SIQ+QNANNS+R++ +F R ERGEDWQT DG D
Sbjct: 149 QCSACFILSVEDTMESILDWNTREGRIFRGGSGAGINLSNIRGSMEHLSKGGTASGPVSFMRGADSWAGTIKSGGKTRRAAKMVVLDVDHPDILDFVWCKAREEEKAGALRDAGFDMSIDGDGFTSIQYQNANNSVRVSSEFMERAERGEDWQTLARADGSPVD 312 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120642.4249.1 >prot_M-pyrifera_M_contig120642.4249.1 ID=prot_M-pyrifera_M_contig120642.4249.1|Name=mRNA_M-pyrifera_M_contig120642.4249.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNback to top mRNA from alignment at M-pyrifera_M_contig120642:3..506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120642.4249.1 ID=mRNA_M-pyrifera_M_contig120642.4249.1|Name=mRNA_M-pyrifera_M_contig120642.4249.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig120642:3..506- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120642:3..506- >mRNA_M-pyrifera_M_contig120642.4249.1 ID=mRNA_M-pyrifera_M_contig120642.4249.1|Name=mRNA_M-pyrifera_M_contig120642.4249.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig120642:3..506- (Macrocystis pyrifera P11B4 male)back to top |