mRNA_M-pyrifera_M_contig12059.4240.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: D8LIZ6_ECTSI (Chp-1 / RAR1 homologue n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIZ6_ECTSI) HSP 1 Score: 523 bits (1348), Expect = 1.280e-182 Identity = 257/340 (75.59%), Postives = 286/340 (84.12%), Query Frame = 1
Query: 1 MKVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSG-------RALAQGDTIGEAITDRADVHVRPGATEEGRGAAASAAXXXXXXXXADA--------TKVAKKAGSLRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCCKKRVYDWDEFEQLKGCQLGRHSTVDPKDRLPPTPPPWQKQQVTKPKPILKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDDASGDFTNPLPAA 975
MKVYVH+EEGSDAE HVTLKLTLPK+WNDESPV+LL+LFIDSYNKRKPDN+LD ECHLE G+ +ALA+GDTIG ITDRADV VRPGAT+EG GAAA XXXXXXXX K+AG+LRCRNFGCNQ+YDE +NSDTACRFHT PPIFHDTRKGW CCKKRVYDWDEFEQL+GCQ+GRHSTVDPKDRLPP PP +++ KP P+LKSID+YN ENP+AATAA SA +++AKKKCTRRPDGTASCVNLGCQKDF VAEN+ SCRYHRLNPVFHDGGKHWGCCP+QVKYEFEDF+AVPGCC GFHDDASG+F+NP P A
Sbjct: 1 MKVYVHFEEGSDAELHVTLKLTLPKKWNDESPVRLLKLFIDSYNKRKPDNQLDVDECHLETGASLDQGAEEQALAKGDTIGATITDRADVFVRPGATKEGMGAAAXXXXXXXXXXXXXXXXXXXXXXATAPKRAGALRCRNFGCNQYYDEADNSDTACRFHTGPPIFHDTRKGWSCCKKRVYDWDEFEQLQGCQVGRHSTVDPKDRLPPNPPSAEQEVAAKPAPVLKSIDNYNAENPEAATAAGSAVKSITAKKKCTRRPDGTASCVNLGCQKDFVVAENQRDSCRYHRLNPVFHDGGKHWGCCPDQVKYEFEDFMAVPGCCIGFHDDASGEFSNPPPGA 340
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: A0A6V2Q7H8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Q7H8_HETAK) HSP 1 Score: 355 bits (912), Expect = 8.230e-117 Identity = 174/330 (52.73%), Postives = 212/330 (64.24%), Query Frame = 1
Query: 1 MKVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVRPGATEEGRGAAASAAXXXXXXXXADATKVAKKAGSLRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCCKKRVYDWDEFEQLKGCQLGRHSTVDPKDRLP--PTPPPWQKQQVTKPKPILKSIDSYNLENPKAATAARSAAATVSAK-KKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDDASGDFTNP--LPAA 975
MKVYVHYEEGSD H TLKLTLPK+W D+ K+L LF++SYN + P N L+ HLE G+ ++ D + + + DR D+HVRPGA + A A+ ++ G LRCRN+GCNQ+Y E N AC HTAPPIFHD RKGW CC KRVYDWDEF+Q+ GC G HSTVDP+ PT + P P+LKSID +N NP+A TAA SA T+ +KCTRR DGTA C N GCQ+DF VAEN SC YH NPVFHD GK+W CCP +VKY+F+DF+ + GCCTG+H D SG+F NP LP A
Sbjct: 1 MKVYVHYEEGSDESLHKTLKLTLPKKWADKETNKVLDLFLESYNAKNPGNLLEMGSVHLENSRGQKMSGQDLVKDLMNDREDIHVRPGAPPAHQEAPAA---------KEQKSEAQTNEGKLRCRNYGCNQWYLEAENGPEACGHHTAPPIFHDARKGWSCCAKRVYDWDEFQQIAGCARGPHSTVDPQVTFAASPTVAAADAAEAKNPGPVLKSIDQFNEANPEAVTAAASAVQTLKVSGQKCTRRGDGTAKCTNKGCQRDFVVAENTPRSCTYHAANPVFHDTGKYWSCCPGKVKYDFDDFMKIAGCCTGYHQDGSGEFDNPESLPPA 321
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: A0A836CMP5_9STRA (Chp-1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP5_9STRA) HSP 1 Score: 351 bits (900), Expect = 1.610e-114 Identity = 178/335 (53.13%), Postives = 224/335 (66.87%), Query Frame = 1
Query: 4 KVYVHYEEGSDAEQHVTLKLTLPKRWNDE-SPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVRPGATEEGRGAAASAAXXXXXXXXADATKVAKKAGSLRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCCKKRVYDWDEFEQLKGCQLGRHSTVDPKDRLPPTPPPWQKQQVTKPKPI--------------LKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQ-KDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDDASGDFTN 960
KVY+HYEEGSDAE H TLKLTLP++W E SP+++L+LFI+SYNK+KP L + CHLE G AL+ GD IG+ + DR D+ VRPGAT+ G+ A+AA XXXXX A A G LRCRN+GC Y E +N AC HTAPP+FHDT+KGW CC KRVYDWDEF+ + GC G HSTVDPK ++ P+ ++SI++YN NP+AATAA S +A +CTRR DGTA C+N GC+ +DF VAEN +C +HRL PVFHD GK+W CCP++VKYEF+DF+A+PGCC G+H D SG+F N
Sbjct: 4 KVYLHYEEGSDAELHTTLKLTLPRKWVAEGSPMQVLELFIESYNKKKPQTPLSAEACHLENSDGLALSAGDVIGDVMRDREDIRVRPGATKPGKSDVATAAAGGXXXXXXXA--AADTDGLLRCRNYGCGARYAEADNHARACAHHTAPPVFHDTKKGWSCCAKRVYDWDEFQAIAGCATGPHSTVDPKVQIAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRSIEAYNAANPQAATAAGSVLKAXAAAPRCTRRADGTARCLNKGCKAQDFVVAENARDACTHHRLGPVFHDTGKYWACCPDRVKYEFDDFLAIPGCCRGYHQDGSGEFDN 336
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: W7U2Z9_9STRA (Chord family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2Z9_9STRA) HSP 1 Score: 311 bits (798), Expect = 1.650e-99 Identity = 150/324 (46.30%), Postives = 203/324 (62.65%), Query Frame = 1
Query: 1 MKVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPD-NKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVRPGATEEGRGAAASAAXXXXXXXXADATKVAKKAGSLRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCCKKRVYDWDEFEQLKGCQLGRHSTVDPKDRLPPTPPPWQKQQVTK--------PKPILKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDDAS 945
MK+YVHYEE E+ +TLKLTLPK W ++ +++L+LFI+SYNK+K LD H+E G L G+ + + ++DR D+++R G G A A A+ + G LRC+N+GCNQ + EENNS+ ACRFH APP+FHDT+KGW CC KRVYDWDEF ++GC GRHS +DPK+ P+P Q + ++KSID +N NP AA A ++AA+ A +CT +PDG+A+C+N GCQKD+ + EN +CRYH PVFHD GK+W CCP VKY+F+DF+ +PGC H D S
Sbjct: 1 MKLYVHYEEAGQDEKALTLKLTLPKSWAEQPLLQVLELFIESYNKKKTGLPPLDKDFVHMEKAGGVILPVGNIVSDMLSDRDDLYIR-----SGPGPARGKIAHLSSPPNAHASSESS-TGLLRCKNYGCNQSFSEENNSEEACRFHKAPPVFHDTKKGWSCCAKRVYDWDEFHTIEGCTTGRHSLIDPKEIFAPSPTLAAAAQAERGDCSNTSSAATVIKSIDEFNQSNPNAAAACKTAASMTQAGTRCTVKPDGSATCLNKGCQKDYLLKENHPSACRYHAAGPVFHDAGKYWSCCPGTVKYDFDDFLKIPGCMLSSHYDGS 318
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: A0A8K1FGH1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGH1_PYTOL) HSP 1 Score: 275 bits (702), Expect = 4.550e-85 Identity = 144/324 (44.44%), Postives = 188/324 (58.02%), Query Frame = 1
Query: 4 KVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVR--PGATEEGRGAAASAAXXXXXXXXADATKVAKKAGSLRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCCK-KRVYDWDEFEQLKGCQLGRHSTVDPKDRLPPTPPPWQKQQV---------TKPKPILKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDD 939
KVY+HYEEG++ E HVTLK+TLP +W + L F+D YN +KPDNKL+++E HLE + L D + A+ D+ ++ P T + AA A VA L+C+N+GC YDE +N D ACR H PP+FHDT+KGW CC K VYDWD+FE+++ C +GRHSTV+P + +P + P+LKSID YN +NP A TA +AAT R DG A CVN GCQK++ VAEN +C +H PVFHD GK+W CCP VKY+FEDF+ VPGC T H+D
Sbjct: 29 KVYMHYEEGAE-ELHVTLKMTLPSKWAGHTVDYLKAFFVDHYNTKKPDNKLEASEYHLEKKNHNVLYGDDLLHTAVEKYEDIFLKAGPSTTRPPKPEAAKA--------------VAVNKNLLQCKNYGCRAKYDEADNHDQACRHHMKPPLFHDTKKGWQCCSSKMVYDWDDFEKIEPCAVGRHSTVEPSAQFAASPTVALAESAGAXXXXXXXXXXXPVLKSIDDYNQKNPNAVTAV--SAATEEKVSTAAGRTDGKARCVNFGCQKEYVVAENHEQACTHHTGPPVFHDAGKYWSCCPKAVKYDFEDFLKVPGCATAAHND 335
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: A0A1V9YKW6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKW6_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.860e-79 Identity = 135/325 (41.54%), Postives = 195/325 (60.00%), Query Frame = 1
Query: 4 KVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVRPGATE--------EGRGAAASAAXXXXXXXXADATKVAKKAGS---LRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCCK-KRVYDWDEFEQLKGCQLGRHSTVDPKDRLPPTPP-PWQKQQVTKPKPILKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDD 939
K+Y+H+EEG +A H+TLKLT+P +W+ + +L + F+++YN+++P+NK+D A+ HLE R L +TI + I R D++V+ G + +GR A S A D T+ ++ ++C+NFGC + + + N + ACR+H APP FHDT+KGW CC K VYDWD+FE+++ C +G HS V + + P P V P LKSID YN NP AAT+ A+++AK +R DG A CVN GCQ ++ V N SC +H PVFHD GK+W CCP +VKY+F++F+ VPGC G H D
Sbjct: 18 KIYLHFEEGDEA-HHLTLKLTIPSKWSGATIDRLKEFFLETYNEKRPNNKVDPAQFHLEGPENRILRGDETIHDTIKSRDDIYVKSGPSTFKHKKDPLDGRTLAGSPAND-------DHTEEREREAPKELVQCKNFGCREKFVDSENHELACRYHKAPPTFHDTKKGWSCCSSKMVYDWDDFEKIEPCTVGFHSAVGNQAPVVPAAPIALPTPVVAAPAAPLKSIDDYNKANPDAATSV----ASITAKPAPPKRTDGKAKCVNYGCQAEYFVDINNDKSCAHHAGAPVFHDSGKYWSCCPKEVKYDFDEFLKVPGCTVGPHKD 330
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: K3X7U4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7U4_GLOUD) HSP 1 Score: 258 bits (659), Expect = 8.860e-79 Identity = 139/326 (42.64%), Postives = 185/326 (56.75%), Query Frame = 1
Query: 4 KVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVRPGATEEGRGAAASAAXXXXXXXXADATKVAKKAGS----LRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCCK-KRVYDWDEFEQLKGCQLGRHSTVDPKDRLPPTPPPWQKQQ--------VTKPK-PILKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDD 939
KVY+H+EEG+DA H+TLK+TLP +W + L + F++ YN +KP++KLD A HLE S AL + + A+ D+ ++ GA+ + A VAKKA + L+C+NFGC + + EE+N D AC H PP FHD +KGW CC K VYDWD+FE++ C++ RHS V P + +P + V P P+LKSID YN NP A TA +A +++ R DG A CVN GCQK++ VAEN SC +H PVFHD GK W CCP VKY+FE F+ VPGC T H D
Sbjct: 18 KVYMHFEEGADAALHLTLKMTLPSKWASHTVDYLKEFFVEHYNTKKPESKLDGALFHLERKS-TALHGDELLHYAVQKHDDLFLKSGASTK---------------KPVKAEGVAKKAAAAQNLLQCKNFGCAKKFAEEDNHDEACHHHAQPPTFHDMKKGWSCCSSKMVYDWDDFEKIPACKVSRHSVVAPSAQFAKSPTVLAAENAEALGAASVPAPAAPVLKSIDDYNKTNPNAVTAVSAAVDNLTSA--APARTDGKARCVNYGCQKEYVVAENSPTSCTHHTGPPVFHDAGKFWSCCPKNVKYDFESFLQVPGCATAAHRD 325
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: A0A6G0XA72_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA72_9STRA) HSP 1 Score: 256 bits (655), Expect = 3.000e-78 Identity = 136/319 (42.63%), Postives = 188/319 (58.93%), Query Frame = 1
Query: 4 KVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVRPGATEEGRGAAASAAXXXXXXXXADATKVAKKAGSL-RCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCC-KKRVYDWDEFEQLKGCQLGRHSTVD-PKDRLPPT----PPPWQKQQVTKPKPILKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDD 939
KVY+H+EEG +A H+TLKLT+P +W+ + +L + F+++YN+RKPDNK++ E HLE GR L +TI E I +R D++V+PG + AD + ++ L +C+NFGC + +++ NN TAC+ HT PP FHD +KGW CC +K YDW+EFE++ C +G HS V + PT P P P LKSID YN +NP A TA +A + K K R DG A CVN GCQK++ VAEN SC +H PVFHD GK+W CCP +KY+F++F+ +P C H D
Sbjct: 18 KVYLHFEEGEEA-NHLTLKLTIPSKWSGATIDRLKEFFLETYNERKPDNKVNPVEYHLERSEGRILRGDETIHEMIKNRDDIYVKPGPST-----------FKHRKDFADEERERQQPKDLIQCKNFGCREKFNDANNHATACKHHTQPPTFHDGKKGWQCCMEKLAYDWEEFEKIAPCAVGFHSAVGLAAPKAEPTGFGAPIPILAAPAA-PATALKSIDDYNEKNPDAVTAV---SAIKAPKPKPAPRADGKAKCVNYGCQKEYVVAENNDTSCPHHAGAPVFHDSGKYWSCCPKVIKYDFDEFLKIPPCVVTAHSD 320
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: H3GU82_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GU82_PHYRM) HSP 1 Score: 253 bits (647), Expect = 4.680e-77 Identity = 133/320 (41.56%), Postives = 178/320 (55.62%), Query Frame = 1
Query: 4 KVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVRPGATEEGRGAAASAAXXXXXXXXADATKVAKKAGSLRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCCK-KRVYDWDEFEQLKGCQLGRHSTVDPKDRLPPTPPPWQKQQVT-------KPKPILKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDD 939
KVY+HYEEGS+A Q +TLK+TLP +W + L + F++ YN +KP+N LD A+ HLE L + + A+ D+ ++ GA+ A V L+C+N GC + + EE NSD ACR H+ PP+FHD +KGW CC K VYDWD+FE+++ C +GRHS V P + +P + P LKSID YN +NP A TA SA + A +R DG A+CVN GCQ+++ VAEN SCR+H PVFHD K W CCP VKY+F+ F+ VPGC H D
Sbjct: 14 KVYMHYEEGSEA-QTLTLKMTLPSKWAGHTVDYLKEFFVEHYNNKKPENALDGAQMHLEKKGDAQLFGDELLHTAVNKYDDLFLKAGAST-----------LKPVRVQKIAAAVESDKNLLQCKNHGCQKKFLEEENSDQACRHHSLPPLFHDMKKGWQCCSSKMVYDWDDFEKIEPCIVGRHSAVGPNSQFAASPTVAAAESAAGXXXXXXPPAAPLKSIDDYNQKNPDAVTAVSSAKESQQAP--APKRTDGKANCVNYGCQQEYVVAENTEASCRHHAGAPVFHDASKFWSCCPKDVKYDFDSFLKVPGCVVSAHTD 319
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Match: A0A024U7E8_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024U7E8_9STRA) HSP 1 Score: 252 bits (644), Expect = 1.160e-76 Identity = 134/319 (42.01%), Postives = 187/319 (58.62%), Query Frame = 1
Query: 4 KVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNKLDSAECHLEVGSGRALAQGDTIGEAITDRADVHVRPGATEEGRGAAASAAXXXXXXXXADATKVAKKAGSLRCRNFGCNQFYDEENNSDTACRFHTAPPIFHDTRKGWGCC-KKRVYDWDEFEQLKGCQLGRHSTVDPKDRLPPTPPPWQKQQ------VTKPKPILKSIDSYNLENPKAATAARSAAATVSAKKKCTRRPDGTASCVNLGCQKDFKVAENKVGSCRYHRLNPVFHDGGKHWGCCPNQVKYEFEDFVAVPGCCTGFHDD 939
K+Y+H+EEG +A H+TLKLT+P +W+ + +L + F+D+YN+RKPDNK+D HLE RAL +TI + I +R D++V+ G S + ++A K ++C+NFGC + ++ N +AC+ HT PP FHDT+KGW CC +K VYDW++FE ++ C +G HST PPP ++ + P P +KSID YN NP A TA SAAA S K R DG A CVN GCQK++ VAEN +C +H P+F D GKHW CCP VKY+F++F+ +P C H D
Sbjct: 18 KIYLHFEEGDEA-NHLTLKLTIPSKWSGATVDRLKEFFLDTYNERKPDNKVDPNAYHLERSENRALRGDETIHDTIKNRDDIYVKLGP---------STYKHKKDLADEERERLAPK-DLVQCKNFGCREKFNPVENHASACKHHTKPPTFHDTKKGWQCCTEKLVYDWEQFELIEPCAVGFHSTTGI------APPPKEESTGFGAPVLVVPAPAVKSIDEYNQNNPNAVTAV-SAAAPKS--KPAAVRTDGKARCVNYGCQKEYVVAENNERACPHHVGAPIFRDAGKHWSCCPKIVKYDFDEFLKIPPCVVTAHTD 316 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12059.4240.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12059.4240.1 >prot_M-pyrifera_M_contig12059.4240.1 ID=prot_M-pyrifera_M_contig12059.4240.1|Name=mRNA_M-pyrifera_M_contig12059.4240.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=326bp MKVYVHYEEGSDAEQHVTLKLTLPKRWNDESPVKLLQLFIDSYNKRKPDNback to top mRNA from alignment at M-pyrifera_M_contig12059:1164..8307+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12059.4240.1 ID=mRNA_M-pyrifera_M_contig12059.4240.1|Name=mRNA_M-pyrifera_M_contig12059.4240.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7144bp|location=Sequence derived from alignment at M-pyrifera_M_contig12059:1164..8307+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12059:1164..8307+ >mRNA_M-pyrifera_M_contig12059.4240.1 ID=mRNA_M-pyrifera_M_contig12059.4240.1|Name=mRNA_M-pyrifera_M_contig12059.4240.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1956bp|location=Sequence derived from alignment at M-pyrifera_M_contig12059:1164..8307+ (Macrocystis pyrifera P11B4 male)back to top |