mRNA_M-pyrifera_M_contig120375.4199.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: L8GTG9_ACACA (Glycosyl hydrolase, family 31 protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GTG9_ACACA) HSP 1 Score: 99.0 bits (245), Expect = 1.140e-22 Identity = 46/67 (68.66%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFDN--ETVSIYRTFVDIHYELRPYLLHAGSTAMENGISVM 195
LF+RWAQMGAF LMENGGD H PW+FDN +TV IYR FV IH EL PY L+AGSTA E G+SV+
Sbjct: 307 LFLRWAQMGAFTPLMENGGDNQHRPWMFDNTNQTVDIYRAFVHIHTELLPYFLNAGSTAYEQGVSVI 373
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: UPI00096B4C9D (alpha-xylosidase-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B4C9D) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-21 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFDNETVSIYRTFVDIHYELRPYLLHAGSTAMENGIS 189
LFIRWAQ+G+F+ LMENGG+ H PW FDNET++IYR FVDIHY+L PYLL G+ A+E +S
Sbjct: 304 LFIRWAQLGSFSPLMENGGNKEHRPWTFDNETLNIYRKFVDIHYQLVPYLLSVGTKAIETNVS 366
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: A0A1X7VEN9_AMPQE (PH domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VEN9_AMPQE) HSP 1 Score: 95.9 bits (237), Expect = 1.440e-21 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFDNETVSIYRTFVDIHYELRPYLLHAGSTAMENGIS 189
LFIRWAQ+G+F+ LMENGG+ H PW FDNET++IYR FVDIHY+L PYLL G+ A+E +S
Sbjct: 863 LFIRWAQLGSFSPLMENGGNKEHRPWTFDNETLNIYRKFVDIHYQLVPYLLSVGTKAIETNVS 925
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: A0A6A5BY59_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BY59_NAEFO) HSP 1 Score: 92.0 bits (227), Expect = 3.190e-20 Identity = 44/68 (64.71%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFDNETV---SIYRTFVDIHYELRPYLLHAGSTAMENGISVM 195
LFIRW QMGAFNSLMENGGDG HEPW +D+ T+ SIYR FV IHYEL P+L G A N S+M
Sbjct: 303 LFIRWFQMGAFNSLMENGGDGPHEPWNYDDATINVTSIYRKFVHIHYELNPFLYSTGIAAYNNHQSIM 370
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: A0A0V0QT81_PSEPJ (Glycoside hydrolase, superfamily n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QT81_PSEPJ) HSP 1 Score: 90.1 bits (222), Expect = 4.340e-20 Identity = 41/65 (63.08%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFDNETVSIYRTFVDIHYELRPYLLHAGSTAMENGISVM 195
+FIRWAQ+GA N LMENGG G HEPW +D ETV IY+ FV+IHYEL P+ +GS A E SVM
Sbjct: 195 VFIRWAQLGALNPLMENGGGGNHEPWAWDGETVEIYKKFVNIHYELFPFFYASGSQAFEKQKSVM 259
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: A0A0D2U3J3_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U3J3_CAPO3) HSP 1 Score: 89.4 bits (220), Expect = 2.840e-19 Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLF---DNETVSIYRTFVDIHYELRPYLLHAGSTAMENGISVM 195
+ +RWAQ+GAF LMENGGDG H PW F DN T IYRTFVD HYE+ PYLL G+ A +G S+M
Sbjct: 330 VLLRWAQLGAFVGLMENGGDGEHRPWGFNPTDNSTTDIYRTFVDAHYEIAPYLLSLGAQAYASGSSIM 397
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: A0A6B2L112_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L112_9EUKA) HSP 1 Score: 89.0 bits (219), Expect = 3.760e-19 Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFDN----ETVSIYRTFVDIHYELRPYLLHAGSTAMENGISVM 195
+F+RWAQ+GAF LMENGG G H PWLFD +T IYR FV+IH L+PY L AGS+A E+G+SV+
Sbjct: 264 VFLRWAQLGAFLPLMENGGGGNHFPWLFDTGNSTQTTDIYRNFVNIHVSLKPYFLSAGSSAFESGVSVI 332
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: UPI001CFF4D70 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFF4D70) HSP 1 Score: 87.0 bits (214), Expect = 1.840e-18 Identity = 41/68 (60.29%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFDNETV---SIYRTFVDIHYELRPYLLHAGSTAMENGISVM 195
+FIRW QMGAFNSLMENGGDG HEPW +D+ T SIYR +V IHYEL P+ G A N S+M
Sbjct: 315 VFIRWFQMGAFNSLMENGGDGPHEPWNYDDATTNVTSIYRKYVHIHYELNPFFYSTGIAAYNNHQSIM 382
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: A0A0L0DKE0_THETB (Alpha-glucosidase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DKE0_THETB) HSP 1 Score: 86.3 bits (212), Expect = 3.430e-18 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFD--NETVSIYRTFVDIHYELRPYLLHAGSTAMENGISVM 195
LF RW QMGAF SLMENGGD H PW+F N T+ YR FV IHYEL PYLL AG+ A +G S+M
Sbjct: 318 LFTRWFQMGAFCSLMENGGDNQHRPWMFGSGNATLDTYRVFVHIHYELVPYLLSAGTQAWIDGSSIM 384
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Match: D2VNX9_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VNX9_NAEGR) HSP 1 Score: 85.9 bits (211), Expect = 4.690e-18 Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = 1
Query: 1 LFIRWAQMGAFNSLMENGGDGVHEPWLFDNETVS---IYRTFVDIHYELRPYLLHAGSTAMENGISVM 195
L+IRW QMG FN LMENGG+GVHEPW +D +++ IYR +V IHYEL PYL AG A N S+M
Sbjct: 317 LYIRWFQMGTFNGLMENGGNGVHEPWGYDTPSLNVTNIYRRYVHIHYELNPYLYSAGINAYANDKSIM 384 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120375.4199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120375.4199.1 >prot_M-pyrifera_M_contig120375.4199.1 ID=prot_M-pyrifera_M_contig120375.4199.1|Name=mRNA_M-pyrifera_M_contig120375.4199.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp MGAFNSLMENGGDGVHEPWLFDNETVSIYRTFVDIHYELRPYLLHAGSTAback to top mRNA from alignment at M-pyrifera_M_contig120375:218..412- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120375.4199.1 ID=mRNA_M-pyrifera_M_contig120375.4199.1|Name=mRNA_M-pyrifera_M_contig120375.4199.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=195bp|location=Sequence derived from alignment at M-pyrifera_M_contig120375:218..412- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120375:218..412- >mRNA_M-pyrifera_M_contig120375.4199.1 ID=mRNA_M-pyrifera_M_contig120375.4199.1|Name=mRNA_M-pyrifera_M_contig120375.4199.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig120375:218..412- (Macrocystis pyrifera P11B4 male)back to top |