mRNA_M-pyrifera_M_contig120040.4139.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig120040.4139.1
Unique NamemRNA_M-pyrifera_M_contig120040.4139.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A517PUM5_9PLAN (6-phosphogluconolactonase n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PUM5_9PLAN)

HSP 1 Score: 320 bits (820), Expect = 1.690e-107
Identity = 153/156 (98.08%), Postives = 154/156 (98.72%), Query Frame = 1
Query:    1 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMIR 468
            PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLP DFT VSHCADLKFTP+GRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMIR
Sbjct:  226 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPDDFTDVSHCADLKFTPDGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMIR 381          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A518FUU7_9PLAN (6-phosphogluconolactonase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FUU7_9PLAN)

HSP 1 Score: 308 bits (790), Expect = 6.000e-103
Identity = 146/156 (93.59%), Postives = 151/156 (96.79%), Query Frame = 1
Query:    1 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMIR 468
            PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDP TGFL EGQTIDTLP DF GVSHCADLKFTP+GRFLYGTNRGHDSLAA+SVD +GKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVF+IDQQTGKLTAVG+PISIPSPSCIMIR
Sbjct:  226 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPETGFLIEGQTIDTLPPDFKGVSHCADLKFTPDGRFLYGTNRGHDSLAAYSVDKKGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFSIDQQTGKLTAVGDPISIPSPSCIMIR 381          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A518IHZ4_9PLAN (6-phosphogluconolactonase n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IHZ4_9PLAN)

HSP 1 Score: 259 bits (661), Expect = 2.050e-83
Identity = 118/156 (75.64%), Postives = 135/156 (86.54%), Query Frame = 1
Query:    1 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMIR 468
            PGAGPRHLTFHP+ K +Y INELKNS+T FDYDP  G L E +TI TLP DF G SHCADLK TP+GRFLYGTNRGHDS+ A+ +D +GKLSL+EI PSLGKGPQNLAI+A+GK+LLCANMPGNNVVVF I+ +TGKLT VG+PISIPSPSCI+IR
Sbjct:  226 PGAGPRHLTFHPDEKHLYAINELKNSVTAFDYDPKIGTLIEQETISTLPEDFKGTSHCADLKITPDGRFLYGTNRGHDSIVAYKIDDQGKLSLLEIEPSLGKGPQNLAISANGKFLLCANMPGNNVVVFHINDETGKLTPVGDPISIPSPSCILIR 381          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A2E8D8I1_9PLAN (6-phosphogluconolactonase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D8I1_9PLAN)

HSP 1 Score: 247 bits (630), Expect = 9.910e-79
Identity = 114/155 (73.55%), Postives = 128/155 (82.58%), Query Frame = 1
Query:    1 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMI 465
            PGAGPRHLTFHPNGK +YVINEL NS++ FDYD  TG L E QT  TLP DF G SHCADLK TPNGRFLYGTNRGHDS+AA+S+D +G+LSLI I PSLGKGPQNLAIT  G+ L+CANMP NNV VF ID++TG L A GEPI+IP PSCIM+
Sbjct:  225 PGAGPRHLTFHPNGKHVYVINELHNSVSLFDYDSETGILIERQTTSTLPDDFDGTSHCADLKITPNGRFLYGTNRGHDSIAAYSLDDDGQLSLIAIKPSLGKGPQNLAITPTGELLICANMPSNNVAVFRIDRETGNLKAAGEPIAIPKPSCIML 379          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A4P5YRP7_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5YRP7_9BACT)

HSP 1 Score: 244 bits (623), Expect = 7.980e-78
Identity = 110/155 (70.97%), Postives = 129/155 (83.23%), Query Frame = 1
Query:    1 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMI 465
            PGAGPRHL FHPNG+ +Y INELKNS+T FDY  ATG L E QTI TLP DF G S+CADLK T NGRFLYGTNRGHDS+A + +  +G+L+L+ IIPSLGKGPQNLA  ADG++LLCANMPG NVVVF +D Q+G LTAVG+P++IPSPSCIM+
Sbjct:  213 PGAGPRHLAFHPNGRHLYAINELKNSVTLFDYTAATGILVERQTISTLPDDFKGKSYCADLKITANGRFLYGTNRGHDSIATYRLGDDGRLTLLGIIPSLGKGPQNLAFAADGRFLLCANMPGKNVVVFRVDPQSGSLTAVGDPLTIPSPSCIMV 367          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A6I1K5E5_9BACT (6-phosphogluconolactonase n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A6I1K5E5_9BACT)

HSP 1 Score: 243 bits (619), Expect = 4.290e-77
Identity = 110/155 (70.97%), Postives = 129/155 (83.23%), Query Frame = 1
Query:    1 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMI 465
            PGAGPRHLTFHPNG+ +YVINELKNS+T FDY   TG LTE +TI TLP DFTG S+CADLK TPNGRFLYGTNRGHDS+AA+ +  +G+L+L+EI PSLGKGPQNL IT  G+ LLCANMPGNN+ VF ID  TG L +VGEP+++PSPSCI +
Sbjct:  223 PGAGPRHLTFHPNGRHVYVINELKNSVTRFDYAVVTGTLTERETISTLPVDFTGRSYCADLKITPNGRFLYGTNRGHDSIAAYRIGEDGRLTLLEIEPSLGKGPQNLLITGGGELLLCANMPGNNLAVFRIDAATGGLKSVGEPLAVPSPSCIRL 377          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A225DU17_9BACT (6-phosphogluconolactonase n=1 Tax=Fimbriiglobus ruber TaxID=1908690 RepID=A0A225DU17_9BACT)

HSP 1 Score: 243 bits (619), Expect = 4.410e-77
Identity = 113/154 (73.38%), Postives = 128/154 (83.12%), Query Frame = 1
Query:    4 GAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMI 465
            GAGPRHLTFHPNGK +YVINEL NS+T FDYD A G LTE QTI TLP DF G S+CADLK TP+G+FLYGTNRGHDS+AA+S+  +G+LSL+ I PSLGKGPQNLAIT DG +LLCANMPGNNV VF ID  TG+L   GEP+S PSPSCIM+
Sbjct:  225 GAGPRHLTFHPNGKWVYVINELLNSVTAFDYDTAAGKLTEKQTIPTLPDDFKGTSYCADLKITPDGKFLYGTNRGHDSVAAYSIGDDGRLSLVAIEPSLGKGPQNLAITPDGAWLLCANMPGNNVAVFRIDAGTGRLKPTGEPVSQPSPSCIML 378          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A3L7UW39_9BACT (Lactonase family protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A3L7UW39_9BACT)

HSP 1 Score: 241 bits (616), Expect = 1.400e-76
Identity = 113/154 (73.38%), Postives = 127/154 (82.47%), Query Frame = 1
Query:    4 GAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMI 465
            GAGPRHLTFHPNGK++YVINEL NS+T FDYD   G LTE QTI T+P DF G SHCADLK TPNGRFLYGTNRGHDS+AA+ +  +GKL+LI I PSLGKGPQNLAI   G+ LLCANMP NNVV+F ID QTG L +VGEPI+I SPSCIM+
Sbjct:  226 GAGPRHLTFHPNGKRVYVINELSNSVTVFDYDTQAGKLTETQTISTVPPDFKGTSHCADLKITPNGRFLYGTNRGHDSIAAYRIGDDGKLTLIGIEPSLGKGPQNLAIMPGGELLLCANMPSNNVVMFRIDSQTGGLKSVGEPIAITSPSCIMV 379          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: A0A7C7SW97_9PLAN (Lactonase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7SW97_9PLAN)

HSP 1 Score: 239 bits (610), Expect = 8.980e-76
Identity = 110/155 (70.97%), Postives = 125/155 (80.65%), Query Frame = 1
Query:    1 PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMI 465
            PG GPRHLTFHPNGK ++ INELKNS+T FDYD  TG L E QTI TLPA F G SHCADLK TP+GRFLYGTNRGHDS+AA+ +  +G+L LI I PSLGKGPQNLAIT DG  LLCANMPGNNV VF ID ++G L +VG+PIS+P PSCI +
Sbjct:  220 PGVGPRHLTFHPNGKHLFAINELKNSVTRFDYDARTGTLIERQTIPTLPAKFDGTSHCADLKITPDGRFLYGTNRGHDSIAAYRIGDDGQLVLIGIEPSLGKGPQNLAITRDGNLLLCANMPGNNVAVFRIDPRSGTLKSVGQPISLPKPSCIKL 374          
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Match: UPI0002FAE3DC (lactonase family protein n=1 Tax=Zavarzinella formosa TaxID=360055 RepID=UPI0002FAE3DC)

HSP 1 Score: 238 bits (606), Expect = 4.040e-75
Identity = 110/154 (71.43%), Postives = 130/154 (84.42%), Query Frame = 1
Query:    4 GAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPADFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSLGKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSPSCIMI 465
            GAGPRHLTFHPNGK++Y INEL NS+T FD++  +G LTE QTI TLP DF G S+CADLK TP+GRFLYGTNRGHDS+A +S+  +GKLSLI I PSLGKGPQNLAITADG +LLCANMPGNN+ VF ID +TG+L +VG+P+S  SPSCIM+
Sbjct:  225 GAGPRHLTFHPNGKRIYAINELLNSVTVFDFNAESGVLTEKQTIPTLPKDFKGESYCADLKITPDGRFLYGTNRGHDSIACYSIGDDGKLSLIAIEPSLGKGPQNLAITADGGWLLCANMPGNNLAVFKIDGKTGQLKSVGDPVSQTSPSCIML 378          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120040.4139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PUM5_9PLAN1.690e-10798.086-phosphogluconolactonase n=6 Tax=Gimesia TaxID=16... [more]
A0A518FUU7_9PLAN6.000e-10393.596-phosphogluconolactonase n=3 Tax=Gimesia panareen... [more]
A0A518IHZ4_9PLAN2.050e-8375.646-phosphogluconolactonase n=1 Tax=Gimesia fumaroli... [more]
A0A2E8D8I1_9PLAN9.910e-7973.556-phosphogluconolactonase n=1 Tax=Planctomycetacea... [more]
A0A4P5YRP7_9BACT7.980e-7870.97Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A6I1K5E5_9BACT4.290e-7770.976-phosphogluconolactonase n=1 Tax=Verrucomicrobia ... [more]
A0A225DU17_9BACT4.410e-7773.386-phosphogluconolactonase n=1 Tax=Fimbriiglobus ru... [more]
A0A3L7UW39_9BACT1.400e-7673.38Lactonase family protein n=2 Tax=Planctomycetes Ta... [more]
A0A7C7SW97_9PLAN8.980e-7670.97Lactonase family protein n=1 Tax=Planctomycetaceae... [more]
UPI0002FAE3DC4.040e-7571.43lactonase family protein n=1 Tax=Zavarzinella form... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120040contigM-pyrifera_M_contig120040:69..539 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score278.1
Seed ortholog evalue2.5e-72
Seed eggNOG ortholog344747.PM8797T_19784
KEGG rclassRC00537
KEGG koko:K07404
KEGG ReactionR02035
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00004,M00006,M00008
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Lactonase, 7-bladed beta-propeller
EggNOG OGs2IYTH@203682,COG2706@1,COG2706@2
EC3.1.1.31
COG Functional cat.G
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size471
Cds size471
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815720.3648322-CDS-M-pyrifera_M_contig120040:68..5391622815720.3648322-CDS-M-pyrifera_M_contig120040:68..539Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig120040 69..539 -
1692277537.496772-CDS-M-pyrifera_M_contig120040:68..5391692277537.496772-CDS-M-pyrifera_M_contig120040:68..539Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig120040 69..539 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120040.4139.1prot_M-pyrifera_M_contig120040.4139.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig120040 69..539 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig120040.4139.1

>prot_M-pyrifera_M_contig120040.4139.1 ID=prot_M-pyrifera_M_contig120040.4139.1|Name=mRNA_M-pyrifera_M_contig120040.4139.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp
PGAGPRHLTFHPNGKQMYVINELKNSITEFDYDPATGFLTEGQTIDTLPA
DFTGVSHCADLKFTPNGRFLYGTNRGHDSLAAFSVDPEGKLSLIEIIPSL
GKGPQNLAITADGKYLLCANMPGNNVVVFAIDQQTGKLTAVGEPISIPSP
SCIMIR*
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mRNA from alignment at M-pyrifera_M_contig120040:69..539-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig120040.4139.1 ID=mRNA_M-pyrifera_M_contig120040.4139.1|Name=mRNA_M-pyrifera_M_contig120040.4139.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=471bp|location=Sequence derived from alignment at M-pyrifera_M_contig120040:69..539- (Macrocystis pyrifera P11B4 male)
CCCGGTGCCGGCCCACGTCATCTGACCTTTCATCCAAACGGAAAGCAGAT GTATGTCATCAACGAACTCAAGAATTCCATCACGGAATTTGATTACGATC CCGCAACCGGCTTTCTGACAGAAGGCCAGACCATTGATACCCTGCCCGCT GACTTCACCGGAGTCAGCCACTGTGCCGACCTGAAATTCACTCCCAATGG TCGGTTCCTCTACGGCACGAATCGCGGCCATGACAGCCTGGCGGCTTTTA GCGTCGACCCAGAGGGAAAATTATCGCTGATCGAAATCATCCCCAGCCTG GGCAAAGGACCACAGAATCTGGCCATTACCGCGGACGGGAAGTATCTGCT CTGTGCGAACATGCCGGGGAATAACGTTGTGGTCTTCGCCATCGATCAAC AGACCGGCAAGCTGACGGCCGTCGGCGAACCGATCTCCATCCCCAGCCCG TCCTGCATCATGATTCGTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig120040:69..539-

>mRNA_M-pyrifera_M_contig120040.4139.1 ID=mRNA_M-pyrifera_M_contig120040.4139.1|Name=mRNA_M-pyrifera_M_contig120040.4139.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig120040:69..539- (Macrocystis pyrifera P11B4 male)
CCCGGTGCCGGCCCACGTCATCTGACCTTTCATCCAAACGGAAAGCAGAT
GTATGTCATCAACGAACTCAAGAATTCCATCACGGAATTTGATTACGATC
CCGCAACCGGCTTTCTGACAGAAGGCCAGACCATTGATACCCTGCCCGCT
GACTTCACCGGAGTCAGCCACTGTGCCGACCTGAAATTCACTCCCAATGG
TCGGTTCCTCTACGGCACGAATCGCGGCCATGACAGCCTGGCGGCTTTTA
GCGTCGACCCAGAGGGAAAATTATCGCTGATCGAAATCATCCCCAGCCTG
GGCAAAGGACCACAGAATCTGGCCATTACCGCGGACGGGAAGTATCTGCT
CTGTGCGAACATGCCGGGGAATAACGTTGTGGTCTTCGCCATCGATCAAC
AGACCGGCAAGCTGACGGCCGTCGGCGAACCGATCTCCATCCCCAGCCCG
TCCTGCATCATGATTCGTTAACCCGGTGCCGGCCCACGTCATCTGACCTT
TCATCCAAACGGAAAGCAGATGTATGTCATCAACGAACTCAAGAATTCCA
TCACGGAATTTGATTACGATCCCGCAACCGGCTTTCTGACAGAAGGCCAG
ACCATTGATACCCTGCCCGCTGACTTCACCGGAGTCAGCCACTGTGCCGA
CCTGAAATTCACTCCCAATGGTCGGTTCCTCTACGGCACGAATCGCGGCC
ATGACAGCCTGGCGGCTTTTAGCGTCGACCCAGAGGGAAAATTATCGCTG
ATCGAAATCATCCCCAGCCTGGGCAAAGGACCACAGAATCTGGCCATTAC
CGCGGACGGGAAGTATCTGCTCTGTGCGAACATGCCGGGGAATAACGTTG
TGGTCTTCGCCATCGATCAACAGACCGGCAAGCTGACGGCCGTCGGCGAA
CCGATCTCCATCCCCAGCCCGTCCTGCATCATGATTCGTTAA
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