mRNA_M-pyrifera_M_contig119978.4121.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: UPI00131E878C (hypothetical protein n=1 Tax=Streptomyces sp. NRRL F-4707 TaxID=1519496 RepID=UPI00131E878C) HSP 1 Score: 53.1 bits (126), Expect = 3.900e-8 Identity = 23/41 (56.10%), Postives = 34/41 (82.93%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIMVS 156
E+GV +KDI+LV+ Q C+REKA+ VL+++ GD+VNAIM +
Sbjct: 18 ETGVDQKDIDLVMAQVNCSREKAVRVLRESGGDLVNAIMAA 58
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: A0A6S9LQR9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LQR9_HETAK) HSP 1 Score: 55.8 bits (133), Expect = 4.390e-8 Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIM 150
E GV +KDIELV+TQA CTR KA++ LK +GDIVNAIM
Sbjct: 150 EEGVDQKDIELVMTQAGCTRPKAVKALKNNSGDIVNAIM 188
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: A0A7R8WJ05_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WJ05_9CRUS) HSP 1 Score: 56.6 bits (135), Expect = 5.430e-8 Identity = 28/39 (71.79%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIM 150
ESGV EKDI+LV+TQA C+R KAI+ LK N DIVNAIM
Sbjct: 182 ESGVEEKDIDLVMTQASCSRPKAIKALKNNNNDIVNAIM 220
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: A0A0A1WFP3_ZEUCU (Nascent polypeptide-associated complex subunit alpha n=4 Tax=Tephritidae TaxID=7211 RepID=A0A0A1WFP3_ZEUCU) HSP 1 Score: 55.8 bits (133), Expect = 5.760e-8 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIM 150
E+GV EKDIELV+TQA TR KAI LKK N DIVNAIM
Sbjct: 174 ETGVDEKDIELVITQANTTRAKAIRALKKHNNDIVNAIM 212
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: A0A034WLZ1_BACDO (Nascent polypeptide-associated complex subunit alpha (Fragment) n=7 Tax=Endopterygota TaxID=33392 RepID=A0A034WLZ1_BACDO) HSP 1 Score: 55.8 bits (133), Expect = 6.860e-8 Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIM 150
E+GV EKDIELV+TQA TR KAI LKK N DIVNAIM
Sbjct: 195 ETGVDEKDIELVITQANTTRAKAIRALKKHNNDIVNAIM 233
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: A0A7K3Q1K7_STRDI (HYPK_UBA domain-containing protein n=3 Tax=Streptomyces TaxID=1883 RepID=A0A7K3Q1K7_STRDI) HSP 1 Score: 52.8 bits (125), Expect = 8.440e-8 Identity = 22/41 (53.66%), Postives = 34/41 (82.93%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIMVS 156
E+GV +KDI+LV+ Q C+REKA+ VL+++ GD++NAIM +
Sbjct: 36 ETGVDQKDIDLVMAQVNCSREKAVRVLRESGGDLINAIMAA 76
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: Q6XIT5_DROYA (Similar to Drosophila melanogaster Nacalpha (Fragment) n=1 Tax=Drosophila yakuba TaxID=7245 RepID=Q6XIT5_DROYA) HSP 1 Score: 52.0 bits (123), Expect = 1.290e-7 Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIM 150
++GV +KDIELV+TQA TR KAI+ LK N DIVNAIM
Sbjct: 23 DTGVDDKDIELVITQANTTRAKAIKALKNNNHDIVNAIM 61
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: A0A6S8E684_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8E684_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.330e-7 Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIM 150
E+GV+ KDIE+V+ Q+ CTR +A+E LKK +GDIVNAIM
Sbjct: 157 ETGVSPKDIEIVMAQSNCTRAEAVEALKKNSGDIVNAIM 195
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: UPI00053F9FEB (nascent polypeptide-associated complex subunit alpha-like protein 4 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F9FEB) HSP 1 Score: 54.7 bits (130), Expect = 1.410e-7 Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 1
Query: 34 ESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIM 150
E+GV +DIELV+TQA TR KA+E LKK+NGDIV+AIM
Sbjct: 165 ETGVEPRDIELVMTQAGATRSKAVEALKKSNGDIVSAIM 203
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Match: A0A8H7PFU4_MORIS (Nascent polypeptide-associated complex subunit alpha n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PFU4_MORIS) HSP 1 Score: 53.9 bits (128), Expect = 2.320e-7 Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1
Query: 40 GVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIMVS 156
GV EKDIELVV+QA +R KA++ LK N DIVNAIMVS
Sbjct: 138 GVDEKDIELVVSQANVSRNKAVKALKNNNNDIVNAIMVS 176 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119978.4121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119978.4121.1 >prot_M-pyrifera_M_contig119978.4121.1 ID=prot_M-pyrifera_M_contig119978.4121.1|Name=mRNA_M-pyrifera_M_contig119978.4121.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp EAPAADSQASAESGVTEKDIELVVTQAKCTREKAIEVLKKTNGDIVNAIMback to top mRNA from alignment at M-pyrifera_M_contig119978:153..308- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119978.4121.1 ID=mRNA_M-pyrifera_M_contig119978.4121.1|Name=mRNA_M-pyrifera_M_contig119978.4121.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=156bp|location=Sequence derived from alignment at M-pyrifera_M_contig119978:153..308- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119978:153..308- >mRNA_M-pyrifera_M_contig119978.4121.1 ID=mRNA_M-pyrifera_M_contig119978.4121.1|Name=mRNA_M-pyrifera_M_contig119978.4121.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig119978:153..308- (Macrocystis pyrifera P11B4 male)back to top |