mRNA_M-pyrifera_M_contig119696.4059.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A2E7K9W2_9PLAN (Uncharacterized protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K9W2_9PLAN) HSP 1 Score: 335 bits (860), Expect = 9.650e-104 Identity = 176/180 (97.78%), Postives = 179/180 (99.44%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQ+PAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAP++TFFQN NTEVQIDCWI
Sbjct: 757 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQLPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPSDTFFQNENTEVQIDCWI 936
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A518A2Q1_9PLAN (Outer membrane biogenesis protein BamB n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A2Q1_9PLAN) HSP 1 Score: 263 bits (673), Expect = 2.720e-78 Identity = 136/180 (75.56%), Postives = 159/180 (88.33%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
V+N+L NA+ +QPLGNL++H GQFLSLS RGLVSYEQKQTFENQI+KIKQQNP SPLAL+KE+ELL+M++RY A+S+LQQ+DR Q+PA K+H VHCLT LIRSDFQQHD+LVTELQQ+VSS+SERLELQRLLIERARARHEF R L+LL+ELGQAPA+TFFQ NTE QIDCWI
Sbjct: 759 VINKLFNANASQPLGNLVIHRGQFLSLSTRGLVSYEQKQTFENQIEKIKQQNPTSPLALYKESELLMMSRRYTQAYSQLQQIDRGQLPAEYHDKYHQLLVHCLTELIRSDFQQHDDLVTELQQKVSSDSERLELQRLLIERARARHEFPRALTLLQELGQAPADTFFQAQNTETQIDCWI 938
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A518I8J5_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I8J5_9PLAN) HSP 1 Score: 195 bits (496), Expect = 1.770e-54 Identity = 105/180 (58.33%), Postives = 137/180 (76.11%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
V+N+L N + NQPLGNLI+ +GQFLSLS GLVSYEQKQTFE QI IK+QN P+AL KE+++L+M+ Y A +L+Q+DR+Q+PA + H ++ L++ IRSDFQQHD+LV +L+QQVSS+SER+ELQRLLIER AR +F+ ++L+ EL QAP ETFFQ TE QID WI
Sbjct: 762 VLNKLFNENQNQPLGNLIIQNGQFLSLSATGLVSYEQKQTFEAQIADIKRQNTQDPIALLKESQMLMMSHSYPEALVKLKQIDRTQLPAQHHDQLHKLIINGLSSQIRSDFQQHDDLVAQLKQQVSSDSERIELQRLLIERYTARQQFNEAIALILELAQAPEETFFQTAATETQIDSWI 941
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A3C0ATD5_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0ATD5_9PLAN) HSP 1 Score: 192 bits (487), Expect = 1.800e-53 Identity = 99/180 (55.00%), Postives = 138/180 (76.67%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
++N+L ++ ++QPLGNLI++ GQFLSL+ GL SYEQKQTFE +I+++K Q+ +PL LFKE+ELL+M+ Y A +L+Q+D +Q+P +++ ++ + CLT++IRSDFQQHDELV L+QQV+SE+ER+ELQRLL+ERA AR EFS L L +L AP ETF + TE QIDCWI
Sbjct: 120 ILNKLFSSDSSQPLGNLIIYQGQFLSLNAMGLTSYEQKQTFEAEIEQLKLQDARNPLVLFKESELLMMSHSYPQALKKLEQIDSAQLPVSNRPQYQAMLIDCLTSIIRSDFQQHDELVPRLKQQVASETERIELQRLLVERAVARKEFSMALETLLKLAAAPVETFIKTGATETQIDCWI 299
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A2E2CDA8_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CDA8_9PLAN) HSP 1 Score: 192 bits (487), Expect = 2.870e-53 Identity = 99/180 (55.00%), Postives = 138/180 (76.67%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
++N+L ++ ++QPLGNLI++ GQFLSL+ GL SYEQKQTFE +I+++K Q+ +PL LFKE+ELL+M+ Y A +L+Q+D +Q+P +++ ++ + CLT++IRSDFQQHDELV L+QQV+SE+ER+ELQRLL+ERA AR EFS L L +L AP ETF + TE QIDCWI
Sbjct: 789 ILNKLFSSDSSQPLGNLIIYQGQFLSLNAMGLTSYEQKQTFEAEIEQLKLQDARNPLVLFKESELLMMSHSYPQALKKLEQIDSAQLPVSNRPQYQAMLIDCLTSIIRSDFQQHDELVPRLKQQVASETERIELQRLLVERAVARKEFSMALETLLKLAAAPVETFIKTGATETQIDCWI 968
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A517X7Q7_9PLAN (Outer membrane biogenesis protein BamB n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A517X7Q7_9PLAN) HSP 1 Score: 190 bits (483), Expect = 9.900e-53 Identity = 99/180 (55.00%), Postives = 137/180 (76.11%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
++N+L + QPLGNLI++ GQFLSLS GLVS+EQKQTFE +I+++KQQN + PL LFKE+ELL+M+ +Q A ++L+++D Q+PA + ++ + CLT++IRS+FQQ+DEL+ +L+QQ++SE ER+ELQRLL+ERARAR EFS L L EL APAE + TE QIDCWI
Sbjct: 757 ILNKLFSPHPGQPLGNLIIYQGQFLSLSAAGLVSFEQKQTFEAEIEQLKQQNASDPLVLFKESELLMMSHHHQQALTKLRRIDPQQLPAKRRPQYQALMIDCLTSIIRSNFQQYDELIPQLKQQIASEKERIELQRLLVERARARKEFSTALEFLLELATAPAEATIKTGATETQIDCWI 936
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A2D5H4Y9_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2D5H4Y9_9PLAN) HSP 1 Score: 189 bits (479), Expect = 3.050e-52 Identity = 99/180 (55.00%), Postives = 136/180 (75.56%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
++N+L + QPLGNLI++ GQFLSLS GLVS+EQKQTFE +I+++KQQN + PL LFKE+ELL+M+ +Q A ++L+++D Q+PA + ++ + CLT++IRS+FQQ+DEL+ +L+QQV+SE ER+ELQRLL+ERARAR EF L L EL APAE + TE QIDCWI
Sbjct: 249 ILNKLFSPHPGQPLGNLIIYQGQFLSLSAAGLVSFEQKQTFEAEIEQLKQQNASDPLVLFKESELLMMSHHHQQALTKLRRIDPQQLPAKRRPQYQALMIDCLTSIIRSNFQQYDELIPQLKQQVASEKERIELQRLLVERARARKEFPTALEFLLELATAPAEATIKTGATETQIDCWI 428
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A517W0Z8_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W0Z8_9PLAN) HSP 1 Score: 186 bits (472), Expect = 2.980e-51 Identity = 101/180 (56.11%), Postives = 135/180 (75.00%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
V++++ NA Q LGNLI++ GQFLSLS GLVSYEQKQTFE +I++IKQQ+ S LAL+KE+ELL+M+ RYQ A ++LQQ+D Q+PA Q FH V+CL++LIRSDF ++D LV +L Q V SE ER+EL+RLLIER AR +++ L+ EL AP ETFFQ NTE+++D W+
Sbjct: 755 VIDKIYNAKDAQRLGNLIIYEGQFLSLSASGLVSYEQKQTFEAEIKQIKQQDSQSSLALYKESELLMMSHRYQDALAQLQQIDIQQLPAKLQNSFHHLIVNCLSSLIRSDFHKYDRLVDQLGQHVRSEKERIELKRLLIERFIARQQYAEAFDLILELANAPEETFFQTANTELRLDSWL 934
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A517RBV7_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RBV7_9PLAN) HSP 1 Score: 186 bits (471), Expect = 4.070e-51 Identity = 100/180 (55.56%), Postives = 134/180 (74.44%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
V+N+L N + +QPLGNLI+ +GQFLSLS GLVSYEQKQ+FE +I IKQQ +PLAL KE+E+L+M+ Y A +LQQ+D+ Q+PA + + ++CL++LIRSDFQ+HD+LV +L+QQV SESE++ELQRLL ER A+ +FS ++LL EL P ET+FQ TE QID WI
Sbjct: 761 VINKLFNETHDQPLGNLIIQNGQFLSLSATGLVSYEQKQSFEAKIASIKQQKTQAPLALLKESEMLMMSHSYPEALLKLQQIDQKQLPAQYRNQLQKLTINCLSSLIRSDFQKHDDLVEQLKQQVRSESEQIELQRLLFERYAAKEQFSDAIALLMELALIPEETYFQTAATETQIDSWI 940
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Match: A0A517VC26_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VC26_9PLAN) HSP 1 Score: 185 bits (469), Expect = 7.550e-51 Identity = 98/180 (54.44%), Postives = 132/180 (73.33%), Query Frame = 1
Query: 1 VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQQNPNSPLALFKEAELLIMNQRYQAAWSRLQQLDRSQIPAADQKKFHDQQVHCLTALIRSDFQQHDELVTELQQQVSSESERLELQRLLIERARARHEFSRTLSLLKELGQAPAETFFQNVNTEVQIDCWI 540
V+N+L + Q LGNLI++ GQFLSLS GL S+EQKQTFE +I+ +KQ+N + PL LFKE+ELL+M+ Y A ++LQ +D +++ DQ ++ + CLT++IRSDF+ HDELV L+QQV+S+ ER+ELQRLL+ERARAR EFS L L EL APA++F + TE QIDCWI
Sbjct: 759 VLNKLFSPDARQSLGNLIIYQGQFLSLSAAGLASFEQKQTFEAEIKHLKQENASDPLVLFKESELLMMSHLYTQALTKLQGIDPAKLSVKDQAQYQAMMIDCLTSIIRSDFKLHDELVQRLEQQVASKKERIELQRLLVERARARKEFSTALKFLFELATAPADSFIKTGGTETQIDCWI 938 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119696.4059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119696.4059.1 >prot_M-pyrifera_M_contig119696.4059.1 ID=prot_M-pyrifera_M_contig119696.4059.1|Name=mRNA_M-pyrifera_M_contig119696.4059.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp VVNRLSNASTNQPLGNLIVHHGQFLSLSPRGLVSYEQKQTFENQIQKIKQback to top mRNA from alignment at M-pyrifera_M_contig119696:2..541- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119696.4059.1 ID=mRNA_M-pyrifera_M_contig119696.4059.1|Name=mRNA_M-pyrifera_M_contig119696.4059.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119696:2..541- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119696:2..541- >mRNA_M-pyrifera_M_contig119696.4059.1 ID=mRNA_M-pyrifera_M_contig119696.4059.1|Name=mRNA_M-pyrifera_M_contig119696.4059.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig119696:2..541- (Macrocystis pyrifera P11B4 male)back to top |