mRNA_M-pyrifera_M_contig119618.4046.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: A0A7S4IQ10_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IQ10_9EUKA) HSP 1 Score: 133 bits (334), Expect = 1.460e-35 Identity = 64/119 (53.78%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 1 WIESFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVENA--ETLEAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAIIITFEHLGHSEEEDHGH 351
W+ESFALGV ++R++V PMA L+ FFS MAP GII+G ++ + + N+ E LEAY ++ AAG+F+YVA+VDIL+EEF I RDKW+K LF++IGFA++A +++ FE L H +++DH H
Sbjct: 211 WVESFALGVNILRASVHIRPMAMLVLFFSTMAPAGIIIGTLLNTFMSNSAGEALEAYSVAIAAGSFLYVAIVDILVEEFLIIRDKWMKTLFLVIGFALEAGVVLIFEELAH-KDQDHDH 328
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: L8GSU8_ACACA (Metal cation transporter, ZIP subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GSU8_ACACA) HSP 1 Score: 91.3 bits (225), Expect = 1.180e-19 Identity = 46/109 (42.20%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 1 WIESFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVENA---ETLEAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAIIITFEH 318
WIE+FALGV+L+++ + L + F++M P+GI++G + + V + E A + A+GTF+YVA+VDILLEEF+ ARDK++K L ++GFA A+++ F+H
Sbjct: 192 WIEAFALGVSLLKAGKQGLSFFKFLMLFAIMCPLGILLGSGLYTAVAGSTAGELTTAVLTAIASGTFVYVAIVDILLEEFQTARDKYIKFLLAVVGFAAMASLLFAFDH 300
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: UPI0015540913 (ZIP family metal transporter n=1 Tax=unclassified Lentimicrobium TaxID=2677434 RepID=UPI0015540913) HSP 1 Score: 72.4 bits (176), Expect = 6.610e-13 Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 10 SFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVENAETL--EAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAIII 306
SFALGV++ +S + I FFS+M PIGII+G +++ I + L EA + AAGTF+Y+AV+DI+ E FE + +W K +++GF + A I I
Sbjct: 154 SFALGVSMAQSNTQKSLFIKTILFFSIMTPIGIIIGSVLSQIDSSRTALWFEAIFDALAAGTFVYIAVLDIIHEVFEAPKKRWGKFAILILGFLLMAGIAI 254
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: UPI000F83DBB4 (ZIP family metal transporter n=1 Tax=Sulfuriflexus mobilis TaxID=1811807 RepID=UPI000F83DBB4) HSP 1 Score: 71.6 bits (174), Expect = 1.300e-12 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 10 SFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVE-NAET-LEAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAIII 306
+FALGV+L S T +I FF+ M P+G+++G ++ + NA EA AAGTF+YVAVVDI+ + FE A D+WVK L + GF + A I I
Sbjct: 155 AFALGVSLKESDFPTFRHVVIIGFFAAMTPLGVVIGTAFSTTLSSNANAAFEAVFDGLAAGTFLYVAVVDIIKDVFEKADDRWVKALLITGGFGLMALIAI 255
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: UPI001C35E9EE ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C35E9EE) HSP 1 Score: 66.6 bits (161), Expect = 3.060e-11 Identity = 38/97 (39.18%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 13 FALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGM-IVASIVENAETLEAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAI 300
F+L V L++SAVR L +A I F++M+PIGI +G+ ++ + +E+ ++A AAGTF+Y+ ++IL E + +KVLF+L+GF++ AA+
Sbjct: 77 FSLSVKLVQSAVRPLWLAAYIGVFALMSPIGIAIGISVMEAQLESGALIQAVLEGLAAGTFVYITFLEILPHELNSPGKQLLKVLFILLGFSIMAAL 173
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: F4PPW2_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PPW2_CAVFA) HSP 1 Score: 68.6 bits (166), Expect = 4.020e-11 Identity = 41/119 (34.45%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 1 WIESFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVENAETLEAYCISFAAGTFIYVAVVDILLEEF-----EIARDKWVKVLFVLIGFAMDAAIIITFEHLGHSEEED 342
W+E+ +LGV+L+R+ L++ +S+ P+GI++G + AS+ + T + ++F++GTFIY+A++DIL+ EF + K VK+ F +IGF +A+ + F HSE+E+
Sbjct: 293 WLEAMSLGVSLVRNKSSFYETLKLVSLYSLTEPLGIVLG-VAASVSVASTTATSLVLAFSSGTFIYIALMDILVVEFNESIKQSRLTKLVKLAFCIIGFLGMSALTLAF----HSEDEE 406
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: A0A524MFW6_9BACT (ZIP family metal transporter n=1 Tax=Candidatus Atribacteria bacterium TaxID=2053509 RepID=A0A524MFW6_9BACT) HSP 1 Score: 66.2 bits (160), Expect = 1.340e-10 Identity = 38/101 (37.62%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 10 SFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVEN--AETLEAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAIII 306
+FALGV+L+RS + L + ++ F++M P GI++G V+S ++ ++ + + AAGTF+YVA+VDI+ EEFE W K ++ G A A + I
Sbjct: 157 AFALGVSLVRSGMDALHLRRVLLLFALMTPFGILLGEFVSSRIQGQTSDLVSGIVNAIAAGTFLYVAIVDIIHEEFESQERLWEKFALLVCGLAFMALLAI 257
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: A0A7S4IDT9_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IDT9_9EUKA) HSP 1 Score: 66.6 bits (161), Expect = 1.420e-10 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 1 WIESFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVENAETL--EAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAIIITF 312
W+ + ALG++L RS V + + M PIGI++G ++ + N L + + +S AAGTFIYVAVVD++L+EF K+ K ++IGF +++ F
Sbjct: 200 WVMALALGISLHRSKVSPKVHFVVALVWPSMQPIGILIGSLLVLFLANNILLAIQGFFVSLAAGTFIYVAVVDVILQEFTAQEYKYQKFALLMIGFIAMVGLLLLF 305
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: A0A518B1X7_9BACT (Zinc transporter ZupT n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B1X7_9BACT) HSP 1 Score: 65.5 bits (158), Expect = 2.870e-10 Identity = 35/101 (34.65%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 10 SFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVENAET--LEAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAIII 306
+FAL V+++R + + L+ FS+M P+G+ G ++ +++ ++ + + ++FAAGTF+Y+A +DIL EF D++ K L V +GFA+ AA+ I
Sbjct: 169 AFALAVSMLRVGMPRGTIFILVMVFSLMTPLGVGGGYLLGELLQGSDVHAVSSMVLAFAAGTFLYIAAIDILHAEFAFPLDRYPKFLAVCLGFALTAAVAI 269
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Match: A0A553Q184_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553Q184_9TELE) HSP 1 Score: 65.1 bits (157), Expect = 4.690e-10 Identity = 38/97 (39.18%), Postives = 62/97 (63.92%), Query Frame = 1
Query: 13 FALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASI-VENAETLEAYCISFAAGTFIYVAVVDILLEEFEIARDKWVKVLFVLIGFAMDAAI 300
F+L V L++SAV+ + IT F+VM+P+GI +G+I+ +E+ ++A AAGTF+Y+ ++IL E A +KVLF+L GF++ AA+
Sbjct: 194 FSLSVKLVQSAVKPAWVLLYITVFAVMSPLGIAIGIIIIEAELESGAFIQAVLEGMAAGTFVYITFMEILPHELNSAERPLLKVLFLLFGFSVMAAL 290 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119618.4046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119618.4046.1 >prot_M-pyrifera_M_contig119618.4046.1 ID=prot_M-pyrifera_M_contig119618.4046.1|Name=mRNA_M-pyrifera_M_contig119618.4046.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp WIESFALGVALMRSAVRTLPMACLITFFSVMAPIGIIVGMIVASIVENAEback to top mRNA from alignment at M-pyrifera_M_contig119618:190..543- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119618.4046.1 ID=mRNA_M-pyrifera_M_contig119618.4046.1|Name=mRNA_M-pyrifera_M_contig119618.4046.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig119618:190..543- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119618:190..543- >mRNA_M-pyrifera_M_contig119618.4046.1 ID=mRNA_M-pyrifera_M_contig119618.4046.1|Name=mRNA_M-pyrifera_M_contig119618.4046.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig119618:190..543- (Macrocystis pyrifera P11B4 male)back to top |