mRNA_M-pyrifera_M_contig119462.4021.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: D8QMX0_SELML (Pre-mRNA-processing factor 19 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QMX0_SELML) HSP 1 Score: 94.0 bits (232), Expect = 8.340e-20 Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 4 VVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQS--TALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLLM 399
++TGGND A+VF+R + + +A+L GH+K VT F +VLTAS+D + K+W + + +T+ HSA + A+ VHP + +F+TAS+D TWAF+++ SG V V ++A HPD L++
Sbjct: 234 ILTGGNDGNAIVFDRSSGEIVASLVGHSKKVTSVKFVARDDLVLTASADKTVKIWQGGEEGAYSCKQTLKEHSAEIRAITVHPTNR--FFVTASDDKTWAFYDLNSGTCTTQVTDAAVQDGYTAASFHPDGLIL 365
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A8H7U7D2_MORIS (Pre-mRNA-processing factor 19 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7U7D2_MORIS) HSP 1 Score: 93.2 bits (230), Expect = 1.520e-19 Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = 1
Query: 4 VVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSG------VVLTASSDGSAKVWNPSAQSTAL-RTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLLM 399
V+TGGND V++R+ +K LA L+GH K +T F+G + + ++AS+D S +VW + L I H + V A+ VHP + YF++AS D TWAFH E+G+ L V P+ + ++AH HPD +++
Sbjct: 226 VLTGGNDKHVQVYSREKEKVLANLTGHTKKITSVKFRGDTDGSEEIDIAVSASADKSVRVWGTGEKGYGLLHNIHAHKSDVNAITVHPSKD--YFVSASSDSTWAFHEYETGSTLLTVSDPETDAGYTAAHFHPDGMIL 362
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A6B2L2U6_9EUKA (Pre-mRNA-processing factor 19 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2U6_9EUKA) HSP 1 Score: 91.3 bits (225), Expect = 7.140e-19 Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 1
Query: 4 VVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTA----------LRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHV 336
++TGG D TA+VF+R KKLATL GH+K VT ++F S ++ TAS D + +VW+PS +A L TI+ H+A +T + +HP + +TAS D TWA H+I +GA L V
Sbjct: 217 LLTGGVDTTAIVFDRNLTKKLATLQGHSKNVTCTLFHPSSELLFTASEDATVRVWSPSEPQSAEDSHQVPYKTLHTISRHTAPITQISLHPTEE--FLVTASADQTWALHDINTGATLLRV 335
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A2T7PH89_POMCA (Pre-mRNA-processing factor 19 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PH89_POMCA) HSP 1 Score: 87.8 bits (216), Expect = 1.320e-17 Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVAS------------AISSAHLHPDSLL 396
++VTGGND TAVVFN+ T++ +A L GH K VT ++ +V+TAS D S +VW A + + I H A VT + +H + G Y ++ S D WAF +I +G L VR K + A++ A HPD L+
Sbjct: 297 RIVTGGNDKTAVVFNKDTEQVMAILKGHTKKVTSVIYHPEEEIVITASPDTSIRVWGV-ANAQCGQMIRAHDAPVTGISLH--ATGDYLLSCSTDMYWAFSDIRTGRVLTKVRDQKWSDGWESMVLRNRVPALTCAQFHPDGLI 437
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A1Y3B3V0_EURMA (Pre-mRNA-processing factor 19 n=3 Tax=Pyroglyphidae TaxID=6952 RepID=A0A1Y3B3V0_EURMA) HSP 1 Score: 85.9 bits (211), Expect = 5.880e-17 Identity = 44/132 (33.33%), Postives = 75/132 (56.82%), Query Frame = 1
Query: 1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLL 396
+++TGGNDH AV+++R +++ + L GH K V +F V+TAS D +VW+ +S L+ I H + VT++ +H + G Y ++ S D W+F +I +G L V ++++A HPD L+
Sbjct: 235 KMITGGNDHNAVIYDRNSEQIVTILKGHGKKVNNVIFHSNQSNVITASPDAQIRVWSVP-ESKTLQVIHAHESPVTSISLH--ATGDYLLSTSNDEKWSFSDINTGKVLIKVGDQTANHSLTTAKFHPDGLI 363
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A7I8W1T3_9ANNE (Pre-mRNA-processing factor 19 n=3 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8W1T3_9ANNE) HSP 1 Score: 84.3 bits (207), Expect = 2.060e-16 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 1
Query: 1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLL 396
+++TGGND TAVV+N++T +ATL GH+K VT V+ + TAS D + +VW +S I H VT + +H + G Y ++ S D WAF +I +G L V + ++ A HPD L+
Sbjct: 237 KIITGGNDKTAVVYNKETDCLVATLKGHSKKVTHVVYHPEEELAFTASPDQTIRVWGVK-ESKCAHVIRAHEMPVTGISLH--ATGDYLLSCSLDGYWAFSDIRNGRVLTRVGDKNSSVPLTCAQFHPDGLI 365
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A6P6Y8P7_DERPT (Pre-mRNA-processing factor 19 n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6Y8P7_DERPT) HSP 1 Score: 82.8 bits (203), Expect = 7.160e-16 Identity = 42/132 (31.82%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLL 396
+++TGGNDH AV+++R +++ + L GH K V ++ V+T+S D +VW+ +S L I H ++VT++ +H + G Y ++ S D W+F +I +G L V +++A HPD L+
Sbjct: 238 KMITGGNDHNAVIYDRNSEQIVTILKGHNKKVNNVIYHSNQSNVITSSPDSQIRVWSVP-ESRTLEVINAHESSVTSISLH--ATGDYLLSTSNDEKWSFSDINTGKVLIKVGDQTANHTLTTAKFHPDGLI 366
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: A0A7S4HKD7_9EUKA (Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HKD7_9EUKA) HSP 1 Score: 75.5 bits (184), Expect = 4.140e-14 Identity = 46/133 (34.59%), Postives = 66/133 (49.62%), Query Frame = 1
Query: 1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLLM 399
++VTGG D +AV+F+R KKKLATL+GH+K VTQ F S + T S D + +VWN S A ++ ++ W FH+IE +A V+S +S +HPD LL+
Sbjct: 69 KIVTGGVDGSAVLFDRAAKKKLATLTGHSKAVTQVSFHPDSTAIATGSQDKTIRVWNAEQGSNAYKSHSISXXXXXXXXXXXXXXXXXXXXXXXXXXWGFHDIERATTVATSSKDSVSSPMSCGGVHPDGLLL 201
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: M2Y6E8_GALSU (Pre-mRNA-processing factor 19 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6E8_GALSU) HSP 1 Score: 77.4 bits (189), Expect = 5.660e-14 Identity = 48/132 (36.36%), Postives = 72/132 (54.55%), Query Frame = 1
Query: 16 GNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWN----PSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSLLM 399
G T F T+K L + S H P+T V +++T+S D +A VW+ + A T+ +H VT + +HP SYF TASED TWAFH++E+G L+ R+ K + I+S +HPD L++
Sbjct: 245 GXXXTVKFFTLDTEKTLTSFSAHKAPLTDLVVHPNENILITSSMDKTAVVWHWEDGDKPKPKAFNTVNIHEGVVTQIFLHPCL--SYFGTASEDCTWAFHDLETGDCLS--RTTKGPTGIASIAIHPDGLIL 372
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Match: E4XNL8_OIKDI (Pre-mRNA-processing factor 19 n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4XNL8_OIKDI) HSP 1 Score: 73.6 bits (179), Expect = 1.250e-12 Identity = 45/131 (34.35%), Postives = 77/131 (58.78%), Query Frame = 1
Query: 1 QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDGSAKVWNPSAQSTALRTIAVHSAAVTALQVHPVSNGSYFMTASEDHTWAFHNIESGAPLAHVRSPKVASAISSAHLHPDSL 393
++VTG +++ VV++ ++ GH V++ V+ VV +AS D + +VW S + A TI H AAVT + +HP+ GSY +++S+DH+WAF ++ESG L ++ + + + S+ HPD L
Sbjct: 232 KIVTG-SENNVVVYDINAAAVVSKFDGHKGAVSKVVYHTNKDVVFSASEDSTVRVW--SLEGGAGTTIKAHKAAVTGIALHPL--GSYILSSSKDHSWAFSDVESGNILT--KATESEAKLESSDFHPDGL 355 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119462.4021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119462.4021.1 >prot_M-pyrifera_M_contig119462.4021.1 ID=prot_M-pyrifera_M_contig119462.4021.1|Name=mRNA_M-pyrifera_M_contig119462.4021.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp QVVTGGNDHTAVVFNRQTKKKLATLSGHAKPVTQSVFQGGSGVVLTASSDback to top mRNA from alignment at M-pyrifera_M_contig119462:8..406- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119462.4021.1 ID=mRNA_M-pyrifera_M_contig119462.4021.1|Name=mRNA_M-pyrifera_M_contig119462.4021.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=399bp|location=Sequence derived from alignment at M-pyrifera_M_contig119462:8..406- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119462:8..406- >mRNA_M-pyrifera_M_contig119462.4021.1 ID=mRNA_M-pyrifera_M_contig119462.4021.1|Name=mRNA_M-pyrifera_M_contig119462.4021.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig119462:8..406- (Macrocystis pyrifera P11B4 male)back to top |