mRNA_M-pyrifera_M_contig119461.4020.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: A0A7S4HR22_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HR22_9EUKA) HSP 1 Score: 144 bits (362), Expect = 2.630e-41 Identity = 66/122 (54.10%), Postives = 84/122 (68.85%), Query Frame = 1
Query: 4 LYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEPYPLAAQGLCAWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRVEFDHEEEKECVICMCTVDPSQLNY 369
+YSFWVPQI CN TR R A +Y+ G ++TR+FIP+YFY CP NF HIEP L W A Q+A+L+LQD+ GPRFFIPKK+LP+KYDY+ V EE +CVICM VD +++
Sbjct: 46 IYSFWVPQIICNVTRETRFAFSKQYLIGTSVTRLFIPLYFYACPYNFFHIEPSTTFPMVLVGWQAFQIAILMLQDKKGPRFFIPKKYLPQKYDYYRSVF--SVEETDCVICMNPVDSRYIDH 165
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: L8GD19_ACACA (Zinc finger family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GD19_ACACA) HSP 1 Score: 144 bits (363), Expect = 1.000e-38 Identity = 72/125 (57.60%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 1 LLYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEPYPLAAQGLCAWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRVEFDHE--EEKECVICMCTVDPSQLNY 369
+LYS W+PQI+CNAT+ R+AL KYV G+TLTR+ IPMYFY CP NFLH++P L A+L LQV VL QD GPR+F+P++FLP KYDY V D E E KECVICM V P+Q +Y
Sbjct: 299 MLYSIWIPQIFCNATQFHRNALLKKYVVGMTLTRLCIPMYFYGCPYNFLHVQPNYNLLSWLAAYLLLQVFVLFTQDLLGPRWFLPRRFLPDKYDYQRPVHVDAEQGESKECVICMSVVLPNQRDY 423
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: F4PK06_CAVFA (RING-type domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PK06_CAVFA) HSP 1 Score: 125 bits (315), Expect = 4.080e-31 Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 1
Query: 1 LLYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEPYPLAAQGLCAWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRVEFDHEEEKECVICMCTVDPSQLNY 369
++YSFWVPQIY NATR R +YV G++ +R+ IP+YF+ CP NF+ +EP + L W+ LQ+ VL LQ+++GP+FFIPK+FLP KY Y ++ + ++CVICMC V+ +Y
Sbjct: 431 IMYSFWVPQIYNNATRCTRRPFLWQYVLGMSFSRLAIPLYFFGCPYNFIPVEPDYTFSLMLFNWMCLQIFVLYLQEKWGPQFFIPKRFLPPKYQYARQIAPTIRDGQQCVICMCDVEADDNDY 553
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: A0A1X6PAD1_PORUM (RING-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAD1_PORUM) HSP 1 Score: 122 bits (306), Expect = 1.160e-30 Identity = 54/98 (55.10%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 4 LYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEPYPLAAQGLCAWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRV 297
LYSFW PQI +AT R L P Y+ G++ TR+ IP+YFY CP NFLHI+P P A L AW+A Q VL Q +GPR+F+PK+FLP KYDY+ V
Sbjct: 171 LYSFWTPQIILSATNDYRRPLHPLYILGMSTTRLAIPLYFYACPVNFLHIQPRPAVAAALVAWMATQAGVLASQHVWGPRWFVPKRFLPEKYDYYRPV 268
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: A0A067C7G2_SAPPC (RING-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C7G2_SAPPC) HSP 1 Score: 123 bits (308), Expect = 1.940e-30 Identity = 65/137 (47.45%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 1 LLYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEP-YPLAAQ-GLC----AWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRVEFD--------HEEEKECVICMCTVDPSQLNY 369
L +SFWVPQI NA R VR+ Y+ G++++R+F+P+YFY CP+NFL P Y + Q G+C W+ALQ+AVLLLQ R GPRFF+P +FLP KY+Y R+ D H +E +CVICM +D +Y
Sbjct: 371 LAFSFWVPQIVHNAHREVRNPFDWVYMLGMSVSRLFLPLYFYGCPSNFLSALPVYQMQVQPGMCYLLVGWVALQIAVLLLQQRCGPRFFVPARFLPVKYNYERRINADQMSLLRANHGDEIDCVICMVELDMDARDY 507
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: A0A7S3UCQ8_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UCQ8_9CHLO) HSP 1 Score: 123 bits (308), Expect = 1.990e-30 Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 7 YSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEPYPLAAQGLCAWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRVEFDHEEEK------ECVICMCTVD 351
YSFW+PQI NA + +R L P+Y+ G+++TR+FIP YF CP NFLH++ + L W+ LQ +LL Q YGPR+F+P++FLP KYD++ +V+ D E +CVICM VD
Sbjct: 384 YSFWMPQIVENAMQDIRKPLMPQYILGMSITRLFIPCYFLGCPQNFLHLDQHLQVCFILAGWVGLQTTMLLTQHYYGPRWFVPRRFLPEKYDFYRQVDLDMTVETGGSSDIDCVICMTPVD 504
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: T0Q5R4_SAPDV (RING-type domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q5R4_SAPDV) HSP 1 Score: 123 bits (309), Expect = 2.530e-30 Identity = 65/137 (47.45%), Postives = 87/137 (63.50%), Query Frame = 1
Query: 1 LLYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEP-YPLAAQ-GLC----AWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRVEFD--------HEEEKECVICMCTVDPSQLNY 369
L +SFWVPQI NA R VR Y+ G++++R+F+P+YFY CP+NFL P Y + Q G+C W+ALQ+AVLLLQ R GPRFF+P +FLP KY+Y R+ D H +E +CVICM +D +Y
Sbjct: 519 LAFSFWVPQIVHNAHREVRSPFDLVYILGMSVSRLFLPLYFYGCPSNFLSALPVYQMQVQPGMCYLLVGWVALQIAVLLLQQRCGPRFFVPARFLPVKYNYERRINADQMSLLRANHGDEIDCVICMVELDMDARDY 655
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: A0A067BII9_SAPPC (RING-type domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BII9_SAPPC) HSP 1 Score: 122 bits (306), Expect = 2.960e-30 Identity = 65/137 (47.45%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 1 LLYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEP-YPLAAQ-GLC----AWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRVEFD--------HEEEKECVICMCTVDPSQLNY 369
L +SFWVPQI NA R VR+ Y+ G++++R+F+P+YFY CP+NFL P Y + AQ G+C W+ALQ+AVL LQ R GPRFF+P +FLP KY+Y R+ D H +E +CVICM +D +Y
Sbjct: 341 LAFSFWVPQIVHNAHREVRNPFDWVYMLGMSVSRLFLPLYFYGCPSNFLSALPVYQMQAQPGMCYLLVGWVALQIAVLQLQQRCGPRFFVPARFLPVKYNYERRINADQMSLLRANHGDEIDCVICMVELDMDARDY 477
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: A0A8J4URL5_9MYCE (RING-type domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4URL5_9MYCE) HSP 1 Score: 122 bits (305), Expect = 8.100e-30 Identity = 60/126 (47.62%), Postives = 80/126 (63.49%), Query Frame = 1
Query: 1 LLYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEPYPLAAQGLCAWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRVEF---DHEEEKECVICMCTVDPSQLNY 369
L+YSFWVPQI NA R ++ KYV GI++TR+ IP+YFY CP+NF+ +EP +Q L W+ +QV VL LQ GP+FFIPK LP KY Y+ + EE + CVICM V+ + +Y
Sbjct: 485 LMYSFWVPQIISNAKRSIKKPFLWKYVIGISITRLVIPLYFYGCPSNFMQLEPVYGFSQFLVFWMIVQVVVLWLQSFLGPQFFIPKSLLPPKYQYYRPIPAVIRSREEGQGCVICMNDVEANDTDY 610
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Match: A0A2V3IS08_9FLOR (Transmembrane E3 ubiquitin-protein ligase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS08_9FLOR) HSP 1 Score: 121 bits (303), Expect = 1.190e-29 Identity = 59/133 (44.36%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 4 LYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHIEPYPLAAQGLCAWLALQVAVLLLQDRYGPRFFIPKKFLPRKYDYFHRV---------------------EFDHEEEKECVICM 339
L+SFWVPQI NA R L P Y+ G T+TR+ IP+YF+ CP NFLH++P P +A L WL+ Q +LL Q ++GPR+FIPK+ LP KYDYF + + D E +EC ICM
Sbjct: 400 LFSFWVPQIVLNAVEDHRRPLLPSYIIGTTVTRLAIPLYFWGCPHNFLHVQPQPASAIALVVWLSTQATILLSQYKFGPRWFIPKELLPEKYDYFRPIVVDDDSADLEAGASEDEMLAADADPEPLRECCICM 532 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119461.4020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119461.4020.1 >prot_M-pyrifera_M_contig119461.4020.1 ID=prot_M-pyrifera_M_contig119461.4020.1|Name=mRNA_M-pyrifera_M_contig119461.4020.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp LLYSFWVPQIYCNATRGVRHALKPKYVFGITLTRMFIPMYFYLCPTNFLHback to top mRNA from alignment at M-pyrifera_M_contig119461:17..542+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119461.4020.1 ID=mRNA_M-pyrifera_M_contig119461.4020.1|Name=mRNA_M-pyrifera_M_contig119461.4020.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=526bp|location=Sequence derived from alignment at M-pyrifera_M_contig119461:17..542+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119461:17..542+ >mRNA_M-pyrifera_M_contig119461.4020.1 ID=mRNA_M-pyrifera_M_contig119461.4020.1|Name=mRNA_M-pyrifera_M_contig119461.4020.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig119461:17..542+ (Macrocystis pyrifera P11B4 male)back to top |