mRNA_M-pyrifera_M_contig119450.4016.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A2R5GCA9_9STRA (Potassium voltage-gated channel subfamily H member 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCA9_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.680e-27 Identity = 81/177 (45.76%), Postives = 120/177 (67.80%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGD-SDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATDEEPADQPTWLTVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I HY ID+ ST+PFD + + SD ++LRS+KL XXXXXXXXXXXXXXXXX++F S++E +F ++P + + + LL ++F+ H +AC WY+ +T ++ +D W+ +GL S+ T+Y+ S YW +ATM +VGYGD+ A DMER++SI Q+VGA+ FGF+I
Sbjct: 194 IVVHYLRGWFLIDLASTLPFDHIVAALMHNDNASDVNSSLRSIKLXXXXXXXXXXXXXXXXXXKKFGSSLEGAFS-LNPALQRLLKLLLQIIFICHLLACFWYFTSTLDDSSDD-NWVMAHGLSSDSIPTQYLASFYWTVATMMAVGYGDIHAVNDMERMYSIFVQVVGATCFGFII 368
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: D8LB68_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB68_ECTSI) HSP 1 Score: 113 bits (282), Expect = 9.490e-26 Identity = 76/165 (46.06%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 40 IDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATDEEPADQPTWLTVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
ID +STVP D + AGG + A LRS K++XXXXXXXXXXXXXXXX + ++ EE R++P V+ + +L Y+ ++AH + C W+++ T E + +W + +G+++ASL TRY+ S+YWA TMT+VGYGDVV T +ER F + L+GA+VFG+++
Sbjct: 290 IDFLSTVPID-KLALLVAGGSGN--AVLRSTKMLXXXXXXXXXXXXXXXXLQSKVAGEEERPTRINPSVMSLLKMLVYMTYIAHILGCMWHWLVTFEP--EGISWASKFGVEEASLGTRYVASIYWAFTTMTTVGYGDVVVTTTVERCFCVVGMLIGATVFGYIV 449
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A7S1TYD3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYD3_9STRA) HSP 1 Score: 110 bits (275), Expect = 8.020e-25 Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYY---MATDEEPADQPTWLTVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I HY ++ WID+ +TVP D ET+ G LRSLKLV XXXXXXXXXXXXXXXX + + I++ +R+ V+ L+ ++F+ HF C W Y + D + TW G+ ++ + TRY+ S+YWA TMT+VGYGD++A D ER F+ VGA+VFG+ +
Sbjct: 684 IRDHYMAWWFWIDLFTTVPIDKVVETISGSG-----GPLRSLKLVRXXXXXXXXXXXXXXXXGK-VEAIQDLTERIGTTPVRIFKLMLILMFIGHFFGCFWSYNSLQSGDPNDWESTTWWGADGIDESDIWTRYVASLYWAFTTMTTVGYGDILAVNDAERFFATIIMFVGATVFGYTV 856
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A662WW46_9STRA (Cyclic nucleotide-binding domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WW46_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.300e-23 Identity = 76/176 (43.18%), Postives = 109/176 (61.93%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATDEEPADQPTWLTVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I RHY + +D+++T+PFD E V G RSLKL+ XXXXXXXXXXXXXXXX + S D +S V+ + LL VL +AH++ C W+YM+ D PAD W ++ +S V++Y+ SVYWAI TMT+VG+GDV A D E+++SI + G ++F +++
Sbjct: 717 IRRHYLRTTFLVDVLATIPFDFVVEAVTVGN------IFRSLKLIRXXXXXXXXXXXXXXXXFKMNSQWMSELD-ISIDTVRLLKLLAPVLIIAHYVGCFWFYMSADR-PADDAWWGHIFFEDRSSKVSKYVASVYWAITTMTTVGFGDVYAVNDYEKIYSIVVVIGGTTLFAYVV 884
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A662XU57_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XU57_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.760e-23 Identity = 77/176 (43.75%), Postives = 108/176 (61.36%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATDEEPADQPTWLTVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I RHY + +D+++T+PFD E V G RSLKL+ XXXXXXXXXXXXXXXX + S D +S V+ + LL VL +AH++ C W+YM+ D PAD W ++ S V++YI SVYWAI TMT+VG+GDV A D E+++SI + G ++F +++
Sbjct: 706 IRRHYLRTTFLVDVLATIPFDFVVEAVTVGN------VFRSLKLIRXXXXXXXXXXXXXXXXFKMNSQWVSELD-ISIDTVRLLKLLAPVLIIAHYVGCFWFYMSADR-PADDAWWGHIFFEDRNSKVSKYIASVYWAITTMTTVGFGDVYAVNDYEKIYSIVVVIGGTTLFAYVV 873
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A3R7JBT5_9STRA (Ion_trans domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JBT5_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.000e-22 Identity = 68/176 (38.64%), Postives = 107/176 (60.80%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATDEEPADQPTWLTVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I RHY S ++D++ST+PFD E + G A RSLKL+ XXXXXXXXXXXXXX + S FD ++ V+ + LL V+ ++H++ C WYY++ ++ D W V+ S++++YI S+YWAI TMT+VG+GD+ A D E+ + + + G ++F +++
Sbjct: 60 IRRHYLKTSFFVDVVSTIPFDFLLEALTVG------AVFRSLKLIRTVXXXXXXXXXXXXXXFKMKSQWMSEFD-INVDTVRLLKLLAPVMIISHYVGCFWYYISANKTK-DNAWWGRVHFDDPESIISKYIASIYWAITTMTTVGFGDIYAVNDYEKAYCVLVVIGGTTLFAYVV 227
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A7S3UYT8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYT8_HETAK) HSP 1 Score: 103 bits (258), Expect = 1.210e-22 Identity = 75/181 (41.44%), Postives = 107/181 (59.12%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATD-----EEPADQPTWLTVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I HY ID STVPFD FE V G A L++L+L XXXXXXXXXXXXXXX + E V+ +VV+ + LL + F+ H C W Y+A + EE D W V G++ + L +RY+ ++YWA TMT+VGYGDV+ +D+ER+++ ++GA+VFG+++
Sbjct: 79 IRDHYLKSWFLIDFFSTVPFDRLFEPVVGG-----TANLKALRLTRSXXXXXXXXXXXXXXXXXLGNA--EDLVEVNAVVVRALKLLLTLGFVGHLFGCFWSYVAIEAAENWEEGEDAAAWWQVLGIESSDLYSRYVAALYWAFTTMTTVGYGDVLPVSDLERVYATVIMIMGATVFGYIV 252
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A6A4ACI2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4ACI2_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.020e-22 Identity = 76/179 (42.46%), Postives = 111/179 (62.01%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATDEEPADQPTWL---TVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I RHY + ++DIM+T+PFD E V AG A +SL+L+XXXXXXXXXXXXXXXXX + S FD ++ V+ + LL V+ +AH++ C WYYM+ D +P D W VY S+ ++YI S+YWAI TMT+VG+GD+ D+E+ + I + G ++F +++
Sbjct: 317 IRRHYLKTAFFVDIMATIPFDFVIEAVAAGN------AFKSLRLIXXXXXXXXXXXXXXXXXLKMNSQWMAEFD-INVDTVRLLKLLAPVMIIAHYVGCIWYYMSADRDPND--AWWGGKNVYFEYPDSIQSKYIASIYWAITTMTTVGFGDIFPINDLEKGYCILVLIGGTTLFAYVV 486
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A6A3FY56_9STRA (Cyclic nucleotide-binding domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FY56_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.060e-22 Identity = 76/179 (42.46%), Postives = 111/179 (62.01%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATDEEPADQPTWL---TVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I RHY + ++DIM+T+PFD E V AG A +SL+L+XXXXXXXXXXXXXXXXX + S FD ++ V+ + LL V+ +AH++ C WYYM+ D +P D W VY S+ ++YI S+YWAI TMT+VG+GD+ D+E+ + I + G ++F +++
Sbjct: 463 IRRHYLKTAFFVDIMATIPFDFVIEAVAAGN------AFKSLRLIXXXXXXXXXXXXXXXXXLKMNSQWMAEFD-INVDTVRLLKLLAPVMIIAHYVGCIWYYMSADRDPND--AWWGGKNVYFEYPDSIQSKYIASIYWAITTMTTVGFGDIFPINDLEKGYCILVLIGGTTLFAYVV 632
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Match: A0A6G0SLG2_9STRA (Cyclic nucleotide-binding domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0SLG2_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.110e-22 Identity = 76/179 (42.46%), Postives = 111/179 (62.01%), Query Frame = 1
Query: 7 IARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVXXXXXXXXXXXXXXXXXRRFLSTIEESFDRVSPIVVKTMPLLFYVLFMAHFIACAWYYMATDEEPADQPTWL---TVYGLQDASLVTRYIGSVYWAIATMTSVGYGDVVAETDMERLFSIATQLVGASVFGFMI 534
I RHY + ++DIM+T+PFD E V AG A +SL+L+XXXXXXXXXXXXXXXXX + S FD ++ V+ + LL V+ +AH++ C WYYM+ D +P D W VY S+ ++YI S+YWAI TMT+VG+GD+ D+E+ + I + G ++F +++
Sbjct: 753 IRRHYLKTAFFVDIMATIPFDFVIEAVAAGN------AFKSLRLIXXXXXXXXXXXXXXXXXLKMNSQWMAEFD-INVDTVRLLKLLAPVMIIAHYVGCIWYYMSADRDPND--AWWGGKNVYFEYPDSIQSKYIASIYWAITTMTTVGFGDIFPINDLEKGYCILVLIGGTTLFAYVV 922 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119450.4016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119450.4016.1 >prot_M-pyrifera_M_contig119450.4016.1 ID=prot_M-pyrifera_M_contig119450.4016.1|Name=mRNA_M-pyrifera_M_contig119450.4016.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp MAIARHYASFSLWIDIMSTVPFDLAFETVFAGGDSDNAAALRSLKLVRSVback to top mRNA from alignment at M-pyrifera_M_contig119450:3..536- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119450.4016.1 ID=mRNA_M-pyrifera_M_contig119450.4016.1|Name=mRNA_M-pyrifera_M_contig119450.4016.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig119450:3..536- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119450:3..536- >mRNA_M-pyrifera_M_contig119450.4016.1 ID=mRNA_M-pyrifera_M_contig119450.4016.1|Name=mRNA_M-pyrifera_M_contig119450.4016.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig119450:3..536- (Macrocystis pyrifera P11B4 male)back to top |