mRNA_M-pyrifera_M_contig119363.3996.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A1Y0CW73_9GAMM (Uncharacterized protein n=1 Tax=Oceanisphaera avium TaxID=1903694 RepID=A0A1Y0CW73_9GAMM) HSP 1 Score: 64.3 bits (155), Expect = 1.700e-10 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDYHLKHIP 249
ALN + T+ LE RR AI + +HPGTVATS +APFRA + K L TP+QAAS + +M + HSGK + + + IP
Sbjct: 153 ALNMAIKTIALEWQRRFP-QAIMVGLHPGTVATSLSAPFRAGLAKGQLHTPEQAASHLIAVM-NSLTTAHSGKIWAWDGQEIP 233
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A850GWJ7_9SPHN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Actirhodobacter atriluteus TaxID=2744473 RepID=A0A850GWJ7_9SPHN) HSP 1 Score: 58.9 bits (141), Expect = 1.950e-8 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDYHLKHIP 249
ALN ++ +E+ R K HAIA+A+HPGTV TS + PF+A++P L P +AA + +++ + SGK FD+ K +P
Sbjct: 166 ALNMLVRNFAIELGRTHK-HAIAVALHPGTVDTSLSEPFQANVPDEQLFAPARAARQLFDVIDGLGTED-SGKHFDWQGKPVP 246
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A3T0EDI5_9PROT (Short-chain dehydrogenase/reductase SDR n=1 Tax=Glycocaulis alkaliphilus TaxID=1434191 RepID=A0A3T0EDI5_9PROT) HSP 1 Score: 58.5 bits (140), Expect = 2.720e-8 Identity = 28/77 (36.36%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDY 231
ALN ++ T ++E+AR+ + A+ + +HPGTV T+ + PFR ++P L TP+ +A + ++ + HSG+CFD+
Sbjct: 167 ALNQIIRTCSIELARK-RPEALIVGLHPGTVETALSEPFRRNVPDAKLFTPEHSAGRLLKV-IDTLTPDHSGRCFDF 241
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A844XNA9_9SPHN (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Qipengyuania vulgaris TaxID=291985 RepID=A0A844XNA9_9SPHN) HSP 1 Score: 57.4 bits (137), Expect = 6.050e-8 Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDY 231
ALN ++ TL++E+AR+ K A +A+HPGTV T+ + PFR ++P L TP +A + + L SG+CFD+
Sbjct: 145 ALNMIIRTLSVELARK-KPDAFCVALHPGTVETNLSQPFRRNVPDGKLFTPAYSAEKLLGV-LSSLRPEQSGRCFDW 219
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A086MHS9_9HYPH (Uncharacterized protein n=2 Tax=Microvirga sp. BSC39 TaxID=1549810 RepID=A0A086MHS9_9HYPH) HSP 1 Score: 57.4 bits (137), Expect = 7.040e-8 Identity = 35/84 (41.67%), Postives = 48/84 (57.14%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDYHLKHIPF 252
ALN +M TL +E+ RR K AI +A+HPGTV T+ + PFR + L TP AA + + L+ SG F + +HIPF
Sbjct: 163 ALNQLMRTLAVEL-RRQKPDAICVALHPGTVDTALSQPFRTGVESGKLFTPAYAAERLLTV-LNGLTAADSGGFFAWDGQHIPF 244
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A1I0GCR1_9PROT (NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family n=2 Tax=Nitrosomonas marina TaxID=917 RepID=A0A1I0GCR1_9PROT) HSP 1 Score: 56.6 bits (135), Expect = 1.310e-7 Identity = 30/77 (38.96%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDY 231
ALN ++ +E+ RR K HAI + +HPGTV ++ + PFR+ +P+ L TP A + ++ + + Q SGKCFD+
Sbjct: 159 ALNMIIKNAAIEMGRRYK-HAIIVGLHPGTVDSNLSKPFRSRVPEGKLFTPDFAVKKLVSVIENLSPQD-SGKCFDW 233
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: UPI000A64957F (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Croceicoccus mobilis TaxID=1703339 RepID=UPI000A64957F) HSP 1 Score: 56.6 bits (135), Expect = 1.310e-7 Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDYHLKHIPF 252
ALN ++ +E+ RR+K A+A+A+HPGTV T+ + PFR ++P L TP+ AA+ + + + + SG F + K IPF
Sbjct: 159 ALNQIIRNFAIELRRRNK-RAVAVALHPGTVETTLSEPFRGNVPDEKLFTPEYAAACLLSV-IDGLSAGDSGGFFAWDGKPIPF 240
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A2D6TV41_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D6TV41_9PROT) HSP 1 Score: 56.6 bits (135), Expect = 1.380e-7 Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDYHLKHIP 249
ALN V+ TL++E+AR K + + + +HPGTV TS +AP +I +H + TP QAA + + ++ A SG C DY K IP
Sbjct: 167 ALNMVIKTLSIEVARTHK-NTLVVGLHPGTVDTSLSAPHSKNI-QHEIFTPDQAAGYLLNV-INTAPIDQSGGCLDYSGKVIP 246
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A2S6UQ21_9PROT (C-factor n=1 Tax=Alphaproteobacteria bacterium MarineAlpha2_Bin1 TaxID=2013066 RepID=A0A2S6UQ21_9PROT) HSP 1 Score: 55.8 bits (133), Expect = 2.480e-7 Identity = 32/84 (38.10%), Postives = 54/84 (64.29%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDYHLKHIPF 252
ALN ++ +++E+ RR+K +I +A+HPGTV T+ + PF+ +R+P AAS+I ++ L +++H+GK DY K I F
Sbjct: 159 ALNQLVRCMSIELNRRNKD-SICVAMHPGTVDTNLSKPFKKK--GLNVRSPNIAASEILDV-LSSLDESHNGKFLDYKFKEIAF 238
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Match: A0A0P1GRA6_9RHOB (C signal n=1 Tax=Tritonibacter multivorans TaxID=928856 RepID=A0A0P1GRA6_9RHOB) HSP 1 Score: 55.5 bits (132), Expect = 3.440e-7 Identity = 29/84 (34.52%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 1 ALNSVMPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAASDIAEIMLHKANQTHSGKCFDYHLKHIPF 252
ALN ++ +E+ R + +I + +HPGTV T +APFR ++ TL+ P Q+A+ + + + ++ H+G+ FD+ K IPF
Sbjct: 157 ALNMLLRCYAIEMTRWNP-QSICVGLHPGTVKTDLSAPFRGNVTADTLQEPAQSAAHLKSV-IDSLSEDHTGQMFDWAGKPIPF 238 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119363.3996.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119363.3996.1 >prot_M-pyrifera_M_contig119363.3996.1 ID=prot_M-pyrifera_M_contig119363.3996.1|Name=mRNA_M-pyrifera_M_contig119363.3996.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp MPTLTLEIARRSKGHAIAIAIHPGTVATSFTAPFRASIPKHTLRTPKQAAback to top mRNA from alignment at M-pyrifera_M_contig119363:2..256+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119363.3996.1 ID=mRNA_M-pyrifera_M_contig119363.3996.1|Name=mRNA_M-pyrifera_M_contig119363.3996.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=255bp|location=Sequence derived from alignment at M-pyrifera_M_contig119363:2..256+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119363:2..256+ >mRNA_M-pyrifera_M_contig119363.3996.1 ID=mRNA_M-pyrifera_M_contig119363.3996.1|Name=mRNA_M-pyrifera_M_contig119363.3996.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig119363:2..256+ (Macrocystis pyrifera P11B4 male)back to top |