mRNA_M-pyrifera_M_contig119351.3992.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: A0A517PT31_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PT31_9PLAN) HSP 1 Score: 365 bits (936), Expect = 1.240e-113 Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 1
Query: 1 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGGDMTQTVSQQ 540
GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQ DPNRATNTQVTVSGIVGGDMTQTVSQQ
Sbjct: 7788 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQTDPNRATNTQVTVSGIVGGDMTQTVSQQ 7967
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: A0A518FVZ5_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FVZ5_9PLAN) HSP 1 Score: 276 bits (705), Expect = 1.460e-82 Identity = 133/180 (73.89%), Postives = 151/180 (83.89%), Query Frame = 1
Query: 1 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGGDMTQTVSQQ 540
GDF P GY ATLAAG+TS I F NGDTKLED EFF YAFPR +I+SD G T L++ YLDSI+F+G+DQ L GQG ILNDDFVQI+DDGD+GFS +G +WVYHPVPSSPY+GDDSYYLPP S +GNTASWQFS+LPAG YRISGYWQ DPNRATNTQVTVSGI GGD+TQT++QQ
Sbjct: 7304 GDFSNPQIGYLATLAAGSTSTIITFDTNGDTKLEDYEFFYYAFPRGAIYSDSGMTTPLDSEYLDSIVFSGSDQSVLRGQGVILNDDFVQIMDDGDTGFSTSGPDWVYHPVPSSPYFGDDSYYLPPGSNTGNTASWQFSDLPAGAYRISGYWQTDPNRATNTQVTVSGIEGGDVTQTINQQ 7483
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: A0A518FWM9_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FWM9_9PLAN) HSP 1 Score: 249 bits (636), Expect = 2.780e-73 Identity = 127/181 (70.17%), Postives = 145/181 (80.11%), Query Frame = 1
Query: 1 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGAD-QGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGGDMTQTVSQQ 540
GDF P +GY ATLAAGATSVT+PFT+N DTKLED E F+YAF R++IFSD G T LEAGYLD+IIF D Q TLWGQG ILNDDFVQI+DDGDSGFS +G+ W Y + + Y+GDDSYYL P S G TASW FS+LPAGTYRISG W AD +RATNTQVTVSGI GGD+TQT++QQ
Sbjct: 1429 GDFTDPQNGYLATLAAGATSVTVPFTVNSDTKLEDNEIFDYAFARTNIFSDAGMTTPLEAGYLDNIIFFPFDDQSTLWGQGVILNDDFVQIMDDGDSGFSTSGAGWTY--LSQNIYFGDDSYYLSPGSNPGATASWSFSDLPAGTYRISGQWYADASRATNTQVTVSGIEGGDVTQTINQQ 1607
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: UPI00118C4F13 (cadherin-like domain-containing protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=UPI00118C4F13) HSP 1 Score: 241 bits (615), Expect = 1.860e-70 Identity = 122/180 (67.78%), Postives = 139/180 (77.22%), Query Frame = 1
Query: 1 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGGDMTQTVSQQ 540
GDF P GY TL AG+TSVT F NGD KLE+ EFFNYAF RS+IF+D G T L++ YLD I+F GADQ TLWGQGAILNDDFVQIIDDGDSGFS +G+ W Y + + YYGDDS+YL P S G TASW FS+LP GTYR+SG W AD +RATNTQVTVSGI GG+MTQTV+QQ
Sbjct: 6966 GDFTDPHIGYLGTLTAGSTSVTFSFATNGDMKLEENEFFNYAFARSNIFNDSGLSTTLDSSYLDRIVFDGADQSTLWGQGAILNDDFVQIIDDGDSGFSTSGTGWNY--ISQNIYYGDDSWYLTPGSNPGATASWVFSDLPVGTYRLSGQWYADGSRATNTQVTVSGITGGNMTQTVNQQ 7143
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: A0A517WUW9_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUW9_9PLAN) HSP 1 Score: 200 bits (509), Expect = 3.350e-56 Identity = 98/180 (54.44%), Postives = 130/180 (72.22%), Query Frame = 1
Query: 1 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGGDMTQTVSQQ 540
GDF P G ++T+ AGATS T+ +++NGDTK+E E F+YAFP ++ +S + T L Y ++I F G TLWG G I+N+D+++IIDDGD GFS++ S+WVYH YY +DSYY+ P + G TASW+F NLPAGTYRISG+WQ DP+RATN Q TVSGI GG +TQT++QQ
Sbjct: 2065 GDFTDPHIGNWSTITAGATSTTVSYSVNGDTKIEADEIFSYAFP-NTFYSSISPQTTLSTAYSNNISFEGGVT-TLWGIGTIINEDYLKIIDDGDVGFSIDPSDWVYHSATGPYYYSEDSYYVAPGANPGVTASWEFDNLPAGTYRISGFWQTDPSRATNAQYTVSGIEGGSVTQTINQQ 2242
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: UPI0018D7116A (Ig-like domain-containing protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=UPI0018D7116A) HSP 1 Score: 190 bits (482), Expect = 1.430e-52 Identity = 97/174 (55.75%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 1 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYL---PPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGG 513
GDF P GY+ T+AAGATS ++ NGDTK+ED EFF +AFPR++I+SD+GT T L GYL++I FAG DQ TLW G ILNDDFV+IIDDGD+GFS++GS+WV+ + YY +D+YY+ A+ NTASW FS+L AG YR+S +W RA N +VSGIVGG
Sbjct: 3044 GDFTDPHIGYWGTIAAGATSAAFQYSTNGDTKIEDHEFFKFAFPRNAIYSDIGTATPLADGYLNNINFAGDDQSTLWATGVILNDDFVKIIDDGDAGFSISGSDWVHFVW--NQYYQNDAYYILGGGSAADGSNTASWAFSDLAAGVYRLSTHWNQGTGRADNVPFSVSGIVGG 3215
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: A0A518IJC7_9PLAN (Calx-beta domain protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IJC7_9PLAN) HSP 1 Score: 185 bits (470), Expect = 5.910e-51 Identity = 96/180 (53.33%), Postives = 123/180 (68.33%), Query Frame = 1
Query: 1 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGGDMTQTVSQQ 540
GDF P GY+ T+AAGATS + + NGDTK+E+ E F +AFPRS+I+SD+GT T L A YLD+IIF GADQ TLW G I+NDD V+IID+GD+GFS GS + Y P+ +Y +D Y+ NT+SW FSNL AGTYR+SG W RATN T++G VGG + T++QQ
Sbjct: 3148 GDFSNPHIGYWGTIAAGATSASFQYATNGDTKIENHESFKFAFPRSTIYSDIGTATPLAADYLDNIIFDGADQSTLWATGIIINDDHVKIIDNGDAGFSQTGSWYTYGGNPT--FYQNDYSYVDGFGTGANTSSWAFSNLAAGTYRLSGNWVPYGLRATNIPTTITGAVGGTVNTTINQQ 3325
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: A0A517RJG7_9PLAN (tRNA3(Ser)-specific nuclease WapA n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RJG7_9PLAN) HSP 1 Score: 156 bits (394), Expect = 9.770e-41 Identity = 84/171 (49.12%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 1 GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSDLGTLTQLEAGYLDSIIFAGADQGTLWGQGAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGG 513
GDF P G + +AAG+TS T+ FTI+GDTK+E E F++AF + +S + T + Y +SI AG TLWG G I+NDD VQIIDDGD+GF++ G++W S +YG D Y+ + +G+ ASW FS+LP+GTYRISG+W D RATN+ TVSGI GG
Sbjct: 2135 GDFIDPQIGGYGMIAAGSTSATVTFTISGDTKIEADEVFDFAFI-DTFYSSVSPFTVISEDYSNSISLAGGVD-TLWGTGTIINDDHVQIIDDGDAGFTIIGNDWTQ--AADSAFYGGDIEYMNSGNHTGDYASWAFSDLPSGTYRISGHWYVDAYRATNSTFTVSGITGG 2301
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: A0A517RIR5_9PLAN (Calx-beta domain protein n=2 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RIR5_9PLAN) HSP 1 Score: 113 bits (282), Expect = 9.750e-26 Identity = 58/99 (58.59%), Postives = 71/99 (71.72%), Query Frame = 1
Query: 244 ILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGGDMTQTVSQQ 540
I DD+ +IIDD D GFS + +W Y + + Y+GDD+YYL + SG ASW FS LPAGTYRISG W A+ +RATNT VTVSGIVGGD TQT+ Q+
Sbjct: 430 IQGDDYKRIIDDDDPGFSKSVGHWTY--LSQNIYHGDDTYYLSSGTYSGVMASWSFSALPAGTYRISGQWYAETDRATNTSVTVSGIVGGDDTQTIDQR 526
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Match: A0A517WYS9_9PLAN (Putative monovalent cation/H+ antiporter subunit B n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WYS9_9PLAN) HSP 1 Score: 110 bits (274), Expect = 1.190e-24 Identity = 54/101 (53.47%), Postives = 72/101 (71.29%), Query Frame = 1
Query: 238 GAILNDDFVQIIDDGDSGFSLNGSNWVYHPVPSSPYYGDDSYYLPPASASGNTASWQFSNLPAGTYRISGYWQADPNRATNTQVTVSGIVGGDMTQTVSQQ 540
G ILNDD+++IIDDGD+ FS G ++ P S Y D+ Y+ NT+SW+FSNLPAGTYR+SG W +PNRATN +T+SGI+GG +T+TV+QQ
Sbjct: 834 GTILNDDYLKIIDDGDAEFSQTG---IWTPFNHSSLYQGDTSYVAGGGTGLNTSSWEFSNLPAGTYRVSGNWSIEPNRATNMPLTISGIIGGSITKTVNQQ 931 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119351.3992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119351.3992.1 >prot_M-pyrifera_M_contig119351.3992.1 ID=prot_M-pyrifera_M_contig119351.3992.1|Name=mRNA_M-pyrifera_M_contig119351.3992.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp GDFPYPASGYFATLAAGATSVTIPFTINGDTKLEDTEFFNYAFPRSSIFSback to top mRNA from alignment at M-pyrifera_M_contig119351:3..542+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119351.3992.1 ID=mRNA_M-pyrifera_M_contig119351.3992.1|Name=mRNA_M-pyrifera_M_contig119351.3992.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig119351:3..542+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119351:3..542+ >mRNA_M-pyrifera_M_contig119351.3992.1 ID=mRNA_M-pyrifera_M_contig119351.3992.1|Name=mRNA_M-pyrifera_M_contig119351.3992.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig119351:3..542+ (Macrocystis pyrifera P11B4 male)back to top |