mRNA_M-pyrifera_M_contig119348.3990.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: A0A2M7LDU0_9SPHN (Uncharacterized protein n=7 Tax=Sphingomonadales TaxID=204457 RepID=A0A2M7LDU0_9SPHN) HSP 1 Score: 354 bits (908), Expect = 5.280e-111 Identity = 169/181 (93.37%), Postives = 178/181 (98.34%), Query Frame = 1
Query: 1 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHV+TKNATCMALATNQPIAP RNTKELRE+N+EQAFHPIYNYAVITDSEEGLILVD+NTLADGEFRNNFFKRSLTWN+GGLLDGARHITLAGHYAYITT AGLTLIDLD PL+PRHV+T+P+TDA
Sbjct: 997 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVETKNATCMALATNQPIAPTRNTKELREVNQEQAFHPIYNYAVITDSEEGLILVDINTLADGEFRNNFFKRSLTWNEGGLLDGARHITLAGHYAYITTAAGLTLIDLDDPLKPRHVITIPMTDA 1177
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: A0A1B6Z4R2_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z4R2_9SPHN) HSP 1 Score: 352 bits (902), Expect = 3.890e-110 Identity = 169/181 (93.37%), Postives = 178/181 (98.34%), Query Frame = 1
Query: 1 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERI+K+PFSSLGHDTHVDTKNATCMALATNQPIAP RNTKELREINEEQAFHPIY+YAV+TDSEEGLILV+VNTLADGEFRNNFFKRSLTWN+ G+LDGARHITLAGHYAYITT AGLTLIDLDKP+EPRHVVT+PLTDA
Sbjct: 1001 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIIKSPFSSLGHDTHVDTKNATCMALATNQPIAPGRNTKELREINEEQAFHPIYDYAVVTDSEEGLILVNVNTLADGEFRNNFFKRSLTWNENGVLDGARHITLAGHYAYITTTAGLTLIDLDKPMEPRHVVTIPLTDA 1181
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: A0A1N6GZQ6_9SPHN (LVIVD repeat-containing protein n=2 Tax=Parasphingorhabdus marina TaxID=394732 RepID=A0A1N6GZQ6_9SPHN) HSP 1 Score: 336 bits (861), Expect = 2.250e-104 Identity = 161/181 (88.95%), Postives = 170/181 (93.92%), Query Frame = 1
Query: 1 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAP RNTKELREINEEQ FHPIYNYAVITDSEEGL+LVDVNTLADGEFRNNFFKR+ TWN+G +L GARHITLAGHYAYI +GL +IDLD PL+PRHV T+P+TDA
Sbjct: 993 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPTRNTKELREINEEQPFHPIYNYAVITDSEEGLVLVDVNTLADGEFRNNFFKRAATWNEGNVLAGARHITLAGHYAYIAAASGLVVIDLDDPLKPRHVTTVPMTDA 1173
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: UPI001AA0266C (Uncharacterized protein n=4 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI001AA0266C) HSP 1 Score: 333 bits (854), Expect = 1.800e-103 Identity = 157/181 (86.74%), Postives = 173/181 (95.58%), Query Frame = 1
Query: 1 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
VQGTGD+VRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERI+KAPFSSLGHDTHVDTKNATCMAL+TNQP+AP RNT ELREINEEQAFHPIYNYAV+TDSEEGLILVD+NTLADGEFRNNFFKR++TWN G+L+GARHITLAGHYAYIT +GL +IDL+ PL+PRHVVT+P+TDA
Sbjct: 971 VQGTGDSVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIIKAPFSSLGHDTHVDTKNATCMALSTNQPVAPERNTAELREINEEQAFHPIYNYAVVTDSEEGLILVDINTLADGEFRNNFFKRAVTWNADGVLNGARHITLAGHYAYITAASGLVVIDLNDPLKPRHVVTMPMTDA 1151
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: A0A3B0S850_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0S850_9ZZZZ) HSP 1 Score: 321 bits (822), Expect = 6.500e-99 Identity = 150/181 (82.87%), Postives = 171/181 (94.48%), Query Frame = 1
Query: 1 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
VQGT D+VRCLQLRGEYMFVAEG+GGFRAYDVA+IGNKGFSERIVKAPFSSLG DTHV +KNATCMAL+TNQP+AP RNTKELREINEEQ FHPIYNYAV+TDSEEGLILV++NTLADGEFRNNFFKR++TWN+GG+L+GA+HITLAGHYAYIT GL ++DL+ PL+PRHVVT+P+TDA
Sbjct: 989 VQGTKDSVRCLQLRGEYMFVAEGRGGFRAYDVAAIGNKGFSERIVKAPFSSLGQDTHVKSKNATCMALSTNQPVAPERNTKELREINEEQPFHPIYNYAVVTDSEEGLILVNINTLADGEFRNNFFKRAVTWNEGGVLNGAQHITLAGHYAYITATNGLVVVDLNDPLKPRHVVTMPMTDA 1169
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: UPI0013D97FBD (hypothetical protein n=1 Tax=Sphingorhabdus sp. Alg239-R122 TaxID=2305989 RepID=UPI0013D97FBD) HSP 1 Score: 310 bits (793), Expect = 7.700e-95 Identity = 150/187 (80.21%), Postives = 165/187 (88.24%), Query Frame = 1
Query: 1 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKR------SLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
VQGT DAVRCLQ+RGEYMFVAEG+GGFR YD+ASIGNKGFSERIVKAPFSSLG DTHV +KNATCMALATNQPI PLRNT+E+REIN+EQ FHPIYNYAV+TDSEEGLILVD+NTLADGEFRNNFFKR S WN+ G+L GARHITLAGHYAYIT DAGL ++DLD P PR+V T+PLTDA
Sbjct: 995 VQGTKDAVRCLQMRGEYMFVAEGRGGFRVYDIASIGNKGFSERIVKAPFSSLGQDTHVKSKNATCMALATNQPINPLRNTEEMREINQEQPFHPIYNYAVVTDSEEGLILVDINTLADGEFRNNFFKRTQFSNGSDAWNENGVLAGARHITLAGHYAYITADAGLVVMDLDNPDSPRYVTTMPLTDA 1181
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: A0A1E4JDR6_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas sp. SCN 67-18 TaxID=1660141 RepID=A0A1E4JDR6_9SPHN) HSP 1 Score: 306 bits (785), Expect = 6.500e-94 Identity = 145/181 (80.11%), Postives = 160/181 (88.40%), Query Frame = 1
Query: 1 VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
VQGTGDAVRCLQLRGEYM+VAEG+GGFR YDVASIGNKGFSERIV APFS G D V ++NATCMAL TNQPI PLRNT E+RE N+EQ FHPIYNYAV+TDSEEGLILVDV T+ADGEFRNNF KR++TWN+GG+LDGARH+TLAGHYAYIT AGL +IDLD PL+PRHV TLPL DA
Sbjct: 940 VQGTGDAVRCLQLRGEYMYVAEGRGGFRVYDVASIGNKGFSERIVTAPFSPAGQDIRVKSRNATCMALPTNQPINPLRNTAEMREANQEQPFHPIYNYAVVTDSEEGLILVDVTTMADGEFRNNFLKRAVTWNEGGVLDGARHVTLAGHYAYITAAAGLVVIDLDDPLKPRHVATLPLRDA 1120
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: A0A418WPN4_9SPHN (Cytochrome_C554 domain-containing protein n=2 Tax=Sphingomonas TaxID=13687 RepID=A0A418WPN4_9SPHN) HSP 1 Score: 291 bits (745), Expect = 3.120e-88 Identity = 139/180 (77.22%), Postives = 155/180 (86.11%), Query Frame = 1
Query: 4 QGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
QGT AV CLQLRGEYMFVAEG+GGFR YDVASIGNKGFSERIV APFS LG D V + NATCMA+ATNQPI+PLRNT E+RE+NEEQ FHPIYNYAV+TDS EGLILVD+NTLADGEFRNNF KR+ TWN+ +L GARHITLAGHYAYI AGL ++DL+ PL+PR+V TLPLTDA
Sbjct: 978 QGTAGAVGCLQLRGEYMFVAEGRGGFRVYDVASIGNKGFSERIVTAPFSPLGQDMQVKSPNATCMAIATNQPISPLRNTPEMREMNEEQPFHPIYNYAVVTDSVEGLILVDINTLADGEFRNNFLKRAATWNENDVLAGARHITLAGHYAYIAATAGLVVVDLNDPLKPRYVTTLPLTDA 1157
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: A0A840HU96_9SPHN (Uncharacterized protein n=2 Tax=Rhizorhapis suberifaciens TaxID=13656 RepID=A0A840HU96_9SPHN) HSP 1 Score: 286 bits (732), Expect = 1.040e-86 Identity = 137/180 (76.11%), Postives = 153/180 (85.00%), Query Frame = 1
Query: 4 QGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREINEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
QGT V CLQLRGEYMF AEGKGGFR YDVAS+ NKGFSERIV APFS+LGHDT V TKNATCMALATNQPI PLR+T ELR+IN+EQ FHPIYNYAVITDSEEGLILV++NT+ADG+F NNF R+LTWN+GG+L+GARHITLAGHYAYIT GL ++DLD PL+PR PL DA
Sbjct: 865 QGTKGRVGCLQLRGEYMFAAEGKGGFRVYDVASVANKGFSERIVSAPFSALGHDTRVKTKNATCMALATNQPINPLRSTPELRKINQEQPFHPIYNYAVITDSEEGLILVNINTMADGDFGNNFLGRALTWNEGGVLNGARHITLAGHYAYITAAKGLVVVDLDDPLKPRITAVRPLEDA 1044
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Match: UPI001F0B78A0 (hypothetical protein n=1 Tax=Limnobacter sp. SAORIC-690 TaxID=1923970 RepID=UPI001F0B78A0) HSP 1 Score: 263 bits (673), Expect = 1.710e-86 Identity = 124/179 (69.27%), Postives = 146/179 (81.56%), Query Frame = 1
Query: 10 TGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSSLGHDTHVDTKNATCMALATNQPIAPLRNTKELREI-NEEQAFHPIYNYAVITDSEEGLILVDVNTLADGEFRNNFFKRSLTWNDGGLLDGARHITLAGHYAYITTDAGLTLIDLDKPLEPRHVVTLPLTDA 543
T A C+QLRGEY+FVAEGKGGFRAYD AS+ NKG+ +R++ APFS LGHDTHV +KNATCMAL TNQPI P +N +L I N EQ FHPIYNYA ITDSEEGLI V+VNTLADGE RNNFF+R++TWN+ G+L+GA HITL GHYAYITT GL +D++ PL+PRH+ TLPL DA
Sbjct: 20 TKGAASCIQLRGEYVFVAEGKGGFRAYDAASVANKGYGQRVITAPFSPLGHDTHVASKNATCMALPTNQPINPEKNQGDLMRITNMEQPFHPIYNYAFITDSEEGLIAVNVNTLADGEPRNNFFERAVTWNENGVLNGASHITLGGHYAYITTPKGLVFVDINNPLKPRHITTLPLQDA 198 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119348.3990.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119348.3990.1 >prot_M-pyrifera_M_contig119348.3990.1 ID=prot_M-pyrifera_M_contig119348.3990.1|Name=mRNA_M-pyrifera_M_contig119348.3990.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp VQGTGDAVRCLQLRGEYMFVAEGKGGFRAYDVASIGNKGFSERIVKAPFSback to top mRNA from alignment at M-pyrifera_M_contig119348:2..544+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119348.3990.1 ID=mRNA_M-pyrifera_M_contig119348.3990.1|Name=mRNA_M-pyrifera_M_contig119348.3990.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=543bp|location=Sequence derived from alignment at M-pyrifera_M_contig119348:2..544+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119348:2..544+ >mRNA_M-pyrifera_M_contig119348.3990.1 ID=mRNA_M-pyrifera_M_contig119348.3990.1|Name=mRNA_M-pyrifera_M_contig119348.3990.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1086bp|location=Sequence derived from alignment at M-pyrifera_M_contig119348:2..544+ (Macrocystis pyrifera P11B4 male)back to top |