mRNA_M-pyrifera_M_contig119338.3987.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: A0A848UG19_9ACTN (DUF4235 domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UG19_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 4.670e-11 Identity = 32/73 (43.84%), Postives = 49/73 (67.12%), Query Frame = 1
Query: 34 GATVAAAAAARNLASSLWRGDAEAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATGEAAP 252
GA AA AAR L +++W G + P++P+DR +W +A +WAV SG+ AG+AR+ +++ +A WE ATG P
Sbjct: 12 GAGALAAIAARKLIAAVWPGASNPPLNPADRRVNWGEALSWAVASGLGAGVARLVSKRTAAKGWEMATGNTPP 84
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: A0A4Q7NX65_9ACTN (Uncharacterized protein DUF4235 n=1 Tax=Motilibacter rhizosphaerae TaxID=598652 RepID=A0A4Q7NX65_9ACTN) HSP 1 Score: 60.8 bits (146), Expect = 3.240e-10 Identity = 36/78 (46.15%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 16 FRLLRTGATVAAAAAARNLASSLWR---GDAEAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATG 240
F+LL G TVAAA AR ++ W+ G+ E P +P D + W +A WA+LSG + GLAR+AA + SAV + R TG
Sbjct: 10 FKLLTAGGTVAAAWVARKSVTTAWKLVTGN-EPPANPEDPEVEWAEAVGWALLSGAVIGLARLAASRQSAVVYRRVTG 86
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: A0A849BSE0_9ACTN (DUF4235 domain-containing protein n=1 Tax=Pseudokineococcus marinus TaxID=351215 RepID=A0A849BSE0_9ACTN) HSP 1 Score: 56.2 bits (134), Expect = 1.870e-8 Identity = 28/78 (35.90%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 13 IFRLLRTGATVAAAAAARNLASSLWRGD--AEAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATG 240
I++++ TG VAA AA + +++WR E P++P + +W++A WA+LSG + G+AR+A R+ +A + ++TG
Sbjct: 5 IWKVVGTGGAVAAGIAANKVLTAVWRKSLGGEPPINPESDETTWKEAIAWALLSGAVVGVARLAFRRNAASYYRKSTG 82
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: A0A420XUS1_9ACTN (Uncharacterized protein DUF4235 n=1 Tax=Motilibacter peucedani TaxID=598650 RepID=A0A420XUS1_9ACTN) HSP 1 Score: 54.3 bits (129), Expect = 1.190e-7 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 19 RLLRTGATVAAAAAARNLASSLWR---GDAEAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATG 240
++L G V AA AAR L ++ W+ G+ E P +P D + W +A WA+LSG + GLAR+AA + +AV + +ATG
Sbjct: 11 KVLTAGGAVGAAWAARKLVTTGWKLTTGN-EPPANPEDPEVEWVEAVGWALLSGAVIGLARLAASRQAAVWYSKATG 86
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: A0A3N1GAA5_9ACTN (Uncharacterized protein DUF4235 n=1 Tax=Pseudokineococcus lusitanus TaxID=763993 RepID=A0A3N1GAA5_9ACTN) HSP 1 Score: 53.9 bits (128), Expect = 1.530e-7 Identity = 30/80 (37.50%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 13 IFRLLRTGATVAAAAAARNLASSLWR----GDAEAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATG 240
+++ + TG +VA A + S++WR GD + P++P + SW +A WAVLSG + G+AR+A R+ +A + R+TG
Sbjct: 5 MWKAVATGGSVATGLLANKVLSAVWRKSRHGD-DPPLNPESDETSWAEAVAWAVLSGAVVGIARLAFRRNAAGYYRRSTG 83
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: A0A0L6CL25_9MICO (Uncharacterized protein n=1 Tax=Luteipulveratus halotolerans TaxID=1631356 RepID=A0A0L6CL25_9MICO) HSP 1 Score: 52.4 bits (124), Expect = 6.430e-7 Identity = 27/86 (31.40%), Postives = 50/86 (58.14%), Query Frame = 1
Query: 1 MKTTIFRLLRTGATVAAAAAARNLASSLWRGD--AEAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATGEAAP 252
M +++++ G+ + A+ A+ W+ + P +P+D D W++A T+AV+SG + GLA++AA K +A W + TG+ P
Sbjct: 1 MGNALWKVVAIGSGLVASRVAKAATDGTWKATMGGQPPQNPADPDVQWKEAVTFAVVSGAIMGLAKMAANKQAAKVWTKTTGQLPP 86
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: A0A542YWP2_9MICO (Uncharacterized protein DUF4235 n=1 Tax=Ornithinicoccus hortensis TaxID=82346 RepID=A0A542YWP2_9MICO) HSP 1 Score: 49.3 bits (116), Expect = 9.810e-6 Identity = 24/78 (30.77%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 13 IFRLLRTGATVAAAAAARNLASSLWR--GDAEAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATG 240
+++L+ TGA +AA A W+ ++P +P D D W++A +A++SG + GL+R+ A + +A ++++TG
Sbjct: 5 VWKLMATGAAMAAGVVASKATDGTWKFVTGGDSPTNPEDPDIDWKEAIAFALVSGAIIGLSRMVANRQAAAIYKKSTG 82
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: A0A838GIF7_9ACTN (DUF4235 domain-containing protein n=1 Tax=Sporichthyaceae bacterium TaxID=2740536 RepID=A0A838GIF7_9ACTN) HSP 1 Score: 49.3 bits (116), Expect = 1.020e-5 Identity = 28/77 (36.36%), Postives = 49/77 (63.64%), Query Frame = 1
Query: 16 FRLLRTGATVAAAAAARNLASSLW-RGDAEAPV-DPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATG 240
++++ TG+ + A AA+ L ++W + +AP +P D +W +A WA+LSGV+ GLAR+ A + A ++R+TG
Sbjct: 8 WKVMATGSALIAGVAAKKLLETVWEKSTGKAPPRNPESPDTTWAEAVAWAILSGVVYGLARLVATRQVAGYYKRSTG 84
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: UPI0015FD619D (DUF4235 domain-containing protein n=1 Tax=Nocardioides dongkuii TaxID=2760089 RepID=UPI0015FD619D) HSP 1 Score: 48.5 bits (114), Expect = 2.090e-5 Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 10 TIFRLLRTGATVAAAAAARNLASSLWRGDA--EAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATGEAAP 252
T+F L+ A V AAA A+ A + W+ + P +P+D D +A WAV+SGVL GLAR+ A++ +A + R+TG P
Sbjct: 10 TVFSLV---AAVGAAALAKKAADATWQVTTGKKPPENPADPDVEIGEAVAWAVVSGVLVGLARMLAQRRAASYYARSTGHLPP 89
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Match: UPI001297DDBF (DUF4235 domain-containing protein n=1 Tax=Ornithinicoccus halotolerans TaxID=1748220 RepID=UPI001297DDBF) HSP 1 Score: 48.1 bits (113), Expect = 2.600e-5 Identity = 25/77 (32.47%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 16 FRLLRTGATVAAAAAARNLASSLWR--GDAEAPVDPSDRDASWRDAATWAVLSGVLAGLARVAARKGSAVTWERATG 240
++++ V A+ AR L W+ +++P +P D D W++A +AVLSGV+ G+AR+ A + + +++ATG
Sbjct: 6 WKVMTAATAVGASVVARKLTDGTWKFVTGSDSPQNPDDPDIEWKEAIAFAVLSGVMVGVARMLAHREATQVYKKATG 82 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119338.3987.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119338.3987.1 >prot_M-pyrifera_M_contig119338.3987.1 ID=prot_M-pyrifera_M_contig119338.3987.1|Name=mRNA_M-pyrifera_M_contig119338.3987.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp MKTTIFRLLRTGATVAAAAAARNLASSLWRGDAEAPVDPSDRDASWRDAAback to top mRNA from alignment at M-pyrifera_M_contig119338:166..423+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119338.3987.1 ID=mRNA_M-pyrifera_M_contig119338.3987.1|Name=mRNA_M-pyrifera_M_contig119338.3987.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=258bp|location=Sequence derived from alignment at M-pyrifera_M_contig119338:166..423+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119338:166..423+ >mRNA_M-pyrifera_M_contig119338.3987.1 ID=mRNA_M-pyrifera_M_contig119338.3987.1|Name=mRNA_M-pyrifera_M_contig119338.3987.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig119338:166..423+ (Macrocystis pyrifera P11B4 male)back to top |