mRNA_M-pyrifera_M_contig119200.3959.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig119200.3959.1
Unique NamemRNA_M-pyrifera_M_contig119200.3959.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: R7QEK0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEK0_CHOCR)

HSP 1 Score: 89.0 bits (219), Expect = 4.650e-21
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 1
Query:    1 SLNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            + N+ +W+  NR  +VPPVGNKLL+ G+  VMLVAGPN R DYHIEAGEE F+ LE DM L V   +DG   DV I
Sbjct:    6 AFNIQKWLSANRHLLVPPVGNKLLFEGEFKVMLVAGPNARTDYHIEAGEEWFYQLEGDMVLKVV--DDGALYDVPI 79          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: T1KT54_TETUR (3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Tetranychus urticae TaxID=32264 RepID=T1KT54_TETUR)

HSP 1 Score: 84.0 bits (206), Expect = 9.210e-18
Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query:    4 LNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            +N+D+WI +N   + PPVGNK ++NG++ V LVAGPN+R DYH+E GEE+F ML+ DM L +   E G    +TI
Sbjct:    9 INIDKWIEKNGPYLKPPVGNKCIFNGQLKVFLVAGPNQRSDYHVENGEEIFIMLKGDMVLNII--EKGKPKSITI 81          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: A0A834VAY3_SARSC (3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834VAY3_SARSC)

HSP 1 Score: 83.6 bits (205), Expect = 1.540e-17
Identity = 37/75 (49.33%), Postives = 52/75 (69.33%), Query Frame = 1
Query:    4 LNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            +N+ EWI +NR    PP+G+K+ +NG++ V  V GPNERLDYH+E GEE F+ML+ DM L V   E+G +  + I
Sbjct:   14 INVSEWIQKNRSDFRPPIGHKIFFNGQLIVFFVGGPNERLDYHVEEGEEFFYMLKGDMCLNVI--ENGKQKSIPI 86          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: A0A132A787_SARSC (3-hydroxyanthranilate 3,4-dioxygenase-like protein n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A132A787_SARSC)

HSP 1 Score: 80.1 bits (196), Expect = 3.910e-17
Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 1
Query:    4 LNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFF-MLERDMRLGVATGEDGVRSDVTI 228
            +N+ EWI +NR    PP+G+K+  NG++ V  V GPNERLDYH+E GEEVFF ML+ DM L V   E+G +  + I
Sbjct:   14 INVSEWIQKNRSDFRPPIGHKIFSNGQLIVFFVGGPNERLDYHVEEGEEVFFYMLKGDMCLNVI--ENGKQKSIPI 87          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: UPI001CF5D510 (3-hydroxyanthranilate 3,4-dioxygenase n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF5D510)

HSP 1 Score: 82.0 bits (201), Expect = 5.030e-17
Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 1
Query:    1 SLNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            ++N+ +W+  N+ S +PPV NKL++N ++ VM V GPN+R DYHIEAGEE+F+ LE DM L +   E+G   D+ I
Sbjct:    5 AINIKQWLQENKMSFLPPVCNKLMHNSQLMVMFVGGPNQRKDYHIEAGEELFYQLEGDMCLKII--ENGEHKDIHI 78          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: UPI001E1DC626 (3-hydroxyanthranilate 3,4-dioxygenase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC626)

HSP 1 Score: 79.3 bits (194), Expect = 7.460e-17
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 1
Query:    1 SLNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            + N+  W+  N+E + PPV NKL++ G+  VMLVAGPN R DYH+EAGEE F+ LE  M L V   +DG+  DV I
Sbjct:    6 AFNIAAWLAANKEHLRPPVSNKLIFAGEFKVMLVAGPNARTDYHVEAGEEWFYQLEGAMVLRVV--DDGIFYDVHI 79          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: A0A6I8NW26_ORNAN (3-hydroxyanthranilate 3,4-dioxygenase n=6 Tax=Monotremata TaxID=9255 RepID=A0A6I8NW26_ORNAN)

HSP 1 Score: 81.6 bits (200), Expect = 1.300e-16
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query:    4 LNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            +N+  W+  NR + +PPVGNKL++  +++VM V GPN+R D+HIE GEEVFF LE DM L V   EDG   D+ I
Sbjct:   68 VNVRTWVEENRAAFLPPVGNKLMHQTQLNVMFVGGPNQREDFHIEEGEEVFFQLEGDMVLRVV--EDGHHRDIRI 140          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: A0A5F8HG89_MONDO (3-hydroxyanthranilate 3,4-dioxygenase n=3 Tax=Didelphinae TaxID=126287 RepID=A0A5F8HG89_MONDO)

HSP 1 Score: 80.5 bits (197), Expect = 2.610e-16
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 1
Query:    4 LNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            +N+  WI +N+ S +PPV NKL++  ++ VM V GPN+R DYHIE GEE+F+ LE  M LG+   E G R DV I
Sbjct:   35 VNVKTWIEKNKSSFLPPVCNKLMHQSQLKVMFVGGPNQRKDYHIEEGEEIFYQLEGHMVLGIL--EKGQRRDVLI 107          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: A0A7K4RDV4_9TYRA (3HAO dioxygenase (Fragment) n=7 Tax=Neognathae TaxID=8825 RepID=A0A7K4RDV4_9TYRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.440e-16
Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 1
Query:    4 LNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            +N+ +WI  N+ + +PPV NKL++  +++VM V GPNER DYHIE GEE+F+ +E DM L +   E+G + DV I
Sbjct:    5 VNVGKWIEENKTAFLPPVCNKLMHRYQLNVMFVGGPNERKDYHIEEGEELFYQVEGDMCLKII--ENGKQKDVVI 77          
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Match: A0A7R9LQB1_9ACAR (Hypothetical protein n=2 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9LQB1_9ACAR)

HSP 1 Score: 75.9 bits (185), Expect = 4.030e-16
Identity = 36/76 (47.37%), Postives = 51/76 (67.11%), Query Frame = 1
Query:    1 SLNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEEVFFMLERDMRLGVATGEDGVRSDVTI 228
            S+N+  WI  N++  +PP+ NKL++N ++ V  V GPN+R DYHIE GEE+F+M++ DM L V   E G   DV I
Sbjct:    5 SINMKTWIEDNKDYFLPPICNKLMHNSQLKVFFVGGPNQRKDYHIEEGEELFYMIKGDMCLKVI--EKGEPRDVII 78          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119200.3959.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QEK0_CHOCR4.650e-2157.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
T1KT54_TETUR9.210e-1850.673-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Tetr... [more]
A0A834VAY3_SARSC1.540e-1749.333-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Sarc... [more]
A0A132A787_SARSC3.910e-1751.323-hydroxyanthranilate 3,4-dioxygenase-like protein... [more]
UPI001CF5D5105.030e-1748.683-hydroxyanthranilate 3,4-dioxygenase n=2 Tax=Bufo... [more]
UPI001E1DC6267.460e-1751.323-hydroxyanthranilate 3,4-dioxygenase-like n=1 Tax... [more]
A0A6I8NW26_ORNAN1.300e-1652.003-hydroxyanthranilate 3,4-dioxygenase n=6 Tax=Mono... [more]
A0A5F8HG89_MONDO2.610e-1650.673-hydroxyanthranilate 3,4-dioxygenase n=3 Tax=Dide... [more]
A0A7K4RDV4_9TYRA3.440e-1648.003HAO dioxygenase (Fragment) n=7 Tax=Neognathae Tax... [more]
A0A7R9LQB1_9ACAR4.030e-1647.37Hypothetical protein n=2 Tax=Medioppia subpectinat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119200contigM-pyrifera_M_contig119200:227..542 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score84.0
Seed ortholog evalue3.4e-14
Seed eggNOG ortholog32264.tetur20g01970.1
KEGG rclassRC00387
KEGG koko:K00452
KEGG ReactionR02665
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate
EggNOG OGs38H2Q@33154,3B9VR@33208,3CXG2@33213,4204T@6656,KOG3995@1,KOG3995@2759
EC1.13.11.6
COG Functional cat.E
Best tax levelArthropoda
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons2
Model size228
Cds size228
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815711.5958252-CDS-M-pyrifera_M_contig119200:226..2841622815711.5958252-CDS-M-pyrifera_M_contig119200:226..284Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119200 227..284 +
1692277533.772375-CDS-M-pyrifera_M_contig119200:226..2841692277533.772375-CDS-M-pyrifera_M_contig119200:226..284Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119200 227..284 +
1622815711.6094227-CDS-M-pyrifera_M_contig119200:372..5421622815711.6094227-CDS-M-pyrifera_M_contig119200:372..542Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119200 373..542 +
1692277533.7842422-CDS-M-pyrifera_M_contig119200:372..5421692277533.7842422-CDS-M-pyrifera_M_contig119200:372..542Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119200 373..542 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119200.3959.1prot_M-pyrifera_M_contig119200.3959.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig119200 227..542 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig119200.3959.1

>prot_M-pyrifera_M_contig119200.3959.1 ID=prot_M-pyrifera_M_contig119200.3959.1|Name=mRNA_M-pyrifera_M_contig119200.3959.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
SLNLDEWILRNRESMVPPVGNKLLYNGKMSVMLVAGPNERLDYHIEAGEE
VFFMLERDMRLGVATGEDGVRSDVTI
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mRNA from alignment at M-pyrifera_M_contig119200:227..542+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig119200.3959.1 ID=mRNA_M-pyrifera_M_contig119200.3959.1|Name=mRNA_M-pyrifera_M_contig119200.3959.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=316bp|location=Sequence derived from alignment at M-pyrifera_M_contig119200:227..542+ (Macrocystis pyrifera P11B4 male)
TCTTTGAACCTTGATGAATGGATTCTACGAAATAGGGAATCGATGGTTCC ACCAGTAGGTATGTGAAGAAACCGGGTTGATGGGGTGAATCTGGTGCAAT GGGGATCTTGCAAGTGGTTGGCATGGAATTGTGTCCATTGCGACAGGTAA CAAGCTACTTTACAATGGAAAGATGTCCGTAATGCTTGTTGCGGGTCCAA ATGAGCGCTTGGATTATCATATTGAGGCTGGGGAAGAGGTGTTCTTCATG TTGGAAAGAGATATGCGGCTTGGTGTCGCGACTGGAGAAGATGGAGTACG AAGTGATGTAACGATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig119200:227..542+

>mRNA_M-pyrifera_M_contig119200.3959.1 ID=mRNA_M-pyrifera_M_contig119200.3959.1|Name=mRNA_M-pyrifera_M_contig119200.3959.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig119200:227..542+ (Macrocystis pyrifera P11B4 male)
TCTTTGAACCTTGATGAATGGATTCTACGAAATAGGGAATCGATGGTTCC
ACCAGTAGTCTTTGAACCTTGATGAATGGATTCTACGAAATAGGGAATCG
ATGGTTCCACCAGTAGGTAACAAGCTACTTTACAATGGAAAGATGTCCGT
AATGCTTGTTGCGGGTCCAAATGAGCGCTTGGATTATCATATTGAGGCTG
GGGAAGAGGTGTTCTTCATGTTGGAAAGAGATATGCGGCTTGGTGTCGCG
ACTGGAGAAGATGGAGTACGAAGTGATGTAACGATCGTAACAAGCTACTT
TACAATGGAAAGATGTCCGTAATGCTTGTTGCGGGTCCAAATGAGCGCTT
GGATTATCATATTGAGGCTGGGGAAGAGGTGTTCTTCATGTTGGAAAGAG
ATATGCGGCTTGGTGTCGCGACTGGAGAAGATGGAGTACGAAGTGATGTA
ACGATC
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