mRNA_M-pyrifera_M_contig119187.3953.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig119187.3953.1
Unique NamemRNA_M-pyrifera_M_contig119187.3953.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: A0A1W2GBR0_9BACT (Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2GBR0_9BACT)

HSP 1 Score: 95.5 bits (236), Expect = 5.540e-22
Identity = 107/122 (87.70%), Postives = 110/122 (90.16%), Query Frame = 1 
Query:    1 MPTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETVFGNPAQKVDA 366
            MPTNAIH SAH+AKSA+LGHGNFINANVTLGAGSDLANHCILHSG         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AG+TVFGNPAQKVDA
Sbjct:   91 MPTNAIHSSAHIAKSAVLGHGNFINANVTLGAGSDLANHCILHSGCTVDHDAKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAGDTVFGNPAQKVDA 212
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: A0A2G5L4S5_9BACT (Acetyltransferase n=1 Tax=Reichenbachiella sp. 5M10 TaxID=1889772 RepID=A0A2G5L4S5_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 6.600e-10
Identity = 25/42 (59.52%), Postives = 35/42 (83.33%), Query Frame = 1 
Query:    1 MPTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCIL 126
            MP NAIH  AH++KS ++GHGNF+NA V LGAG+++ +HC+L
Sbjct:   91 MPVNAIHNGAHISKSCVIGHGNFVNAGVILGAGTEIGSHCLL 132
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: M7XAB2_9BACT (Acetyltransferase n=2 Tax=Mariniradius TaxID=1245590 RepID=M7XAB2_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 6.600e-10
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:    4 PTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSG 135
            P NAIH  A+++  A +GHGNFINA VTLGAGS + +HCILH+G
Sbjct:   92 PVNAIHGMAYISTDATIGHGNFINAKVTLGAGSKIGSHCILHTG 135
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: UPI000348711F (acetyltransferase n=1 Tax=Nafulsella turpanensis TaxID=1265690 RepID=UPI000348711F)

HSP 1 Score: 63.2 bits (152), Expect = 1.280e-9
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:    4 PTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSG 135
            P NA+H +A +AKSA +GHGNFIN    +GAG++L +HCILHSG
Sbjct:   92 PVNAVHRTAVIAKSASIGHGNFINQQAKIGAGTELGSHCILHSG 135
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: A0A1V3QYX4_9BACT (Acetyltransferase n=4 Tax=Algoriphagus TaxID=246875 RepID=A0A1V3QYX4_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 1.770e-9
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:    4 PTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSG 135
            P NAIH  A+++  A LGHGNFINANVT+GAG+ + +HCI H+G
Sbjct:   92 PVNAIHDRAYISTDASLGHGNFINANVTIGAGTKVGSHCIFHTG 135
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: A0A1M7Q2I9_9BACT (Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=2 Tax=Cyclobacterium TaxID=68288 RepID=A0A1M7Q2I9_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 1.790e-9
Identity = 25/42 (59.52%), Postives = 34/42 (80.95%), Query Frame = 1 
Query:    4 PTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILH 129
            P NA+H  A+++  A +GHGNFINA VT+GAG+++ NHCILH
Sbjct:   92 PVNALHRLAYLSTDAAIGHGNFINAKVTIGAGAEIGNHCILH 133
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: UPI001C5B8C0F (acetyltransferase n=1 Tax=Arthrospiribacter ruber TaxID=2487934 RepID=UPI001C5B8C0F)

HSP 1 Score: 62.4 bits (150), Expect = 2.490e-9
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:    4 PTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSG 135
            P NAIH +A+++K+A +GHGNFINA VT+G   ++  HCILH+G
Sbjct:   92 PVNAIHQTAYISKNAAIGHGNFINAKVTIGTSVEIGGHCILHTG 135
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: A0A142EK57_9BACT (Acetyltransferase n=6 Tax=Algoriphagus TaxID=246875 RepID=A0A142EK57_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 3.430e-9
Identity = 24/44 (54.55%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:    4 PTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSG 135
            P NAIH  A+++  A +GHGNF+NANV +GAG+++ +HCI H+G
Sbjct:   92 PVNAIHQRAYVSTDAAIGHGNFVNANVIIGAGTEVGSHCIFHTG 135
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BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: UPI000418EBD5 (acetyltransferase n=1 Tax=Algoriphagus terrigena TaxID=344884 RepID=UPI000418EBD5)

HSP 1 Score: 61.2 bits (147), Expect = 6.660e-9
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 1 
Query:    4 PTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSG 135
            P NAIH  A+++  A +GHGNFINANV +GAG+ + +HCI H+G
Sbjct:   92 PVNAIHRRAYISTDAAIGHGNFINANVAIGAGTKVGSHCIFHTG 135
[Close]
BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Match: UPI001CF6F608 (acetyltransferase n=3 Tax=Echinicola TaxID=390846 RepID=UPI001CF6F608)

HSP 1 Score: 60.8 bits (146), Expect = 9.400e-9
Identity = 25/44 (56.82%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:    4 PTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSG 135
            P NAIH +++++  A +GHGNFINA V +GAG+ L +HCI+HSG
Sbjct:   92 PINAIHKTSYISTDASIGHGNFINAKVNIGAGAKLGSHCIIHSG 135
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119187.3953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W2GBR0_9BACT5.540e-2287.70Sugar O-acyltransferase, sialic acid O-acetyltrans... [more]
A0A2G5L4S5_9BACT6.600e-1059.52Acetyltransferase n=1 Tax=Reichenbachiella sp. 5M1... [more]
M7XAB2_9BACT6.600e-1063.64Acetyltransferase n=2 Tax=Mariniradius TaxID=12455... [more]
UPI000348711F1.280e-961.36acetyltransferase n=1 Tax=Nafulsella turpanensis T... [more]
A0A1V3QYX4_9BACT1.770e-961.36Acetyltransferase n=4 Tax=Algoriphagus TaxID=24687... [more]
A0A1M7Q2I9_9BACT1.790e-959.52Sugar O-acyltransferase, sialic acid O-acetyltrans... [more]
UPI001C5B8C0F2.490e-956.82acetyltransferase n=1 Tax=Arthrospiribacter ruber ... [more]
A0A142EK57_9BACT3.430e-954.55Acetyltransferase n=6 Tax=Algoriphagus TaxID=24687... [more]
UPI000418EBD56.660e-956.82acetyltransferase n=1 Tax=Algoriphagus terrigena T... [more]
UPI001CF6F6089.400e-956.82acetyltransferase n=3 Tax=Echinicola TaxID=390846 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119187contigM-pyrifera_M_contig119187:177..545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score64.7
Seed ortholog evalue3.5e-08
Seed eggNOG ortholog1239962.C943_01788
Hectar predicted targeting categoryother localisation
EggNOG free text desc.sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
EggNOG OGs47PJQ@768503,4NNTF@976,COG0110@1,COG0110@2
COG Functional cat.S
Best tax levelCytophagia
Best eggNOG OGNA|NA|NA
Exons1
Model size369
Cds size369
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815711.2996001-CDS-M-pyrifera_M_contig119187:176..5451622815711.2996001-CDS-M-pyrifera_M_contig119187:176..545Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119187 177..545 -
1692277533.6293774-CDS-M-pyrifera_M_contig119187:176..5451692277533.6293774-CDS-M-pyrifera_M_contig119187:176..545Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119187 177..545 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119187.3953.1prot_M-pyrifera_M_contig119187.3953.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig119187 177..545 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig119187.3953.1

>prot_M-pyrifera_M_contig119187.3953.1 ID=prot_M-pyrifera_M_contig119187.3953.1|Name=mRNA_M-pyrifera_M_contig119187.3953.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp
MPTNAIHMSAHMAKSAILGHGNFINANVTLGAGSDLANHCILHSGCTVDH
GAKLSDFVQIGAGATVSANVELGESAFAGAGSVIVSGVKIGKNARVGAGS
VVIADVAAGETVFGNPAQKVDA*
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mRNA from alignment at M-pyrifera_M_contig119187:177..545-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig119187.3953.1 ID=mRNA_M-pyrifera_M_contig119187.3953.1|Name=mRNA_M-pyrifera_M_contig119187.3953.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=369bp|location=Sequence derived from alignment at M-pyrifera_M_contig119187:177..545- (Macrocystis pyrifera P11B4 male)
ATGCCGACCAATGCCATTCACATGTCAGCCCATATGGCCAAATCTGCCAT
TCTCGGTCACGGCAATTTTATTAATGCTAATGTTACCCTGGGAGCTGGAT
CTGATTTAGCCAACCACTGTATCCTCCACAGCGGATGCACTGTAGATCAC
GGCGCGAAACTGAGTGACTTTGTACAGATTGGAGCAGGAGCTACTGTAAG
TGCTAATGTGGAATTGGGCGAAAGCGCTTTCGCAGGTGCAGGCTCTGTGA
TTGTGAGTGGTGTCAAGATTGGTAAAAATGCGAGAGTTGGTGCGGGTTCC
GTGGTAATTGCCGATGTTGCAGCTGGAGAGACTGTTTTTGGTAATCCGGC
ACAAAAGGTCGACGCATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig119187:177..545-

>mRNA_M-pyrifera_M_contig119187.3953.1 ID=mRNA_M-pyrifera_M_contig119187.3953.1|Name=mRNA_M-pyrifera_M_contig119187.3953.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig119187:177..545- (Macrocystis pyrifera P11B4 male)
ATGCCGACCAATGCCATTCACATGTCAGCCCATATGGCCAAATCTGCCAT
TCTCGGTCACGGCAATTTTATTAATGCTAATGTTACCCTGGGAGCTGGAT
CTGATTTAGCCAACCACTGTATCCTCCACAGCGGATGCACTGTAGATCAC
GGCGCGAAACTGAGTGACTTTGTACAGATTGGAGCAGGAGCTACTGTAAG
TGCTAATGTGGAATTGGGCGAAAGCGCTTTCGCAGGTGCAGGCTCTGTGA
TTGTGAGTGGTGTCAAGATTGGTAAAAATGCGAGAGTTGGTGCGGGTTCC
GTGGTAATTGCCGATGTTGCAGCTGGAGAGACTGTTTTTGGTAATCCGGC
ACAAAAGGTCGACGCATAAATGCCGACCAATGCCATTCACATGTCAGCCC
ATATGGCCAAATCTGCCATTCTCGGTCACGGCAATTTTATTAATGCTAAT
GTTACCCTGGGAGCTGGATCTGATTTAGCCAACCACTGTATCCTCCACAG
CGGATGCACTGTAGATCACGGCGCGAAACTGAGTGACTTTGTACAGATTG
GAGCAGGAGCTACTGTAAGTGCTAATGTGGAATTGGGCGAAAGCGCTTTC
GCAGGTGCAGGCTCTGTGATTGTGAGTGGTGTCAAGATTGGTAAAAATGC
GAGAGTTGGTGCGGGTTCCGTGGTAATTGCCGATGTTGCAGCTGGAGAGA
CTGTTTTTGGTAATCCGGCACAAAAGGTCGACGCATAA
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