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Homology
BLAST of mRNA_M-pyrifera_M_contig11917.3948.1 vs. uniprot
Match: D7FM87_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM87_ECTSI) HSP 1 Score: 267 bits (682), Expect = 1.480e-81 Identity = 226/409 (55.26%), Postives = 255/409 (62.35%), Query Frame = 1
Query: 1 SRYGHILTPADLESFLPTEDPGVSVHVARLRTLISQQQQPGHPPTTVGDADDVDMTPVGTAAAPNXXXXXXXXXXXXVGWGRDRGYWARPCPPDS---ARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKRAGEEKPAPRQAVEEVPGSTSVGTYLQESLGFLSQQQ-TGEWPTVVPNTAGAGAARAG-------SSLGMAFLSGMSAGAEGVVGEQAYTESVDVVAGATVDASDLPP--SSPAADSRVP------------SRDHDGDNSTAAVTAAVEAFGIRDEEEGVRGGEGEARLGDQEVSRARVRFVDQEGVVLGGGQDEXXXXXXXXXXXXXXXXXXXXXGDAEMECGVRAGGREEIARVLSERFLAGEEEGVDYRDVDGDERLDDLDQLARDE 1152
SR+GHILTP DLES LP++DP V++HVARL+TL+ Q XXXXXXXXXXXX ARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGK AGEEKPAP+QAVEEVPGSTSVGTYLQESLGFLSQ+Q G WPT +P T+GAGA +SLGMAFLSG+ A A + DV AG TVD+SD+P SS A + VP + + D D AAVTAAV A G++D+ + +V RVRF D+ G GGG XXXXXXXXXXXXXXXXXXXXX GREE+AR+LSERFLAG E+GVDYR VDGDERLDDLDQL+RDE
Sbjct: 97 SRFGHILTPGDLESLLPSQDPAVALHVARLKTLMLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKHAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQKQPNGGWPTGLP-TSGAGAGXXXXXXXXXXTSLGMAFLSGVCADAG----------ARDVAAGETVDSSDVPEAASSQAEVTAVPIASGMPDGRERHACEDDVDARAAAVTAAVGAIGLQDDGK------------KADVDGRRVRFSDEMGSDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GREEVARILSERFLAGLEQGVDYRSVDGDERLDDLDQLSRDE 475
BLAST of mRNA_M-pyrifera_M_contig11917.3948.1 vs. uniprot
Match: F2TWH5_SALR5 (DUF2052 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWH5_SALR5) HSP 1 Score: 58.2 bits (139), Expect = 7.570e-6 Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 1
Query: 292 VRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGK 405
VRNRRYRR+QQL + G +FS+EAMKER PWL+ ++VG+
Sbjct: 91 VRNRRYRRMQQLLQEGTFFSEEAMKERCPWLYDQFVGR 128
BLAST of mRNA_M-pyrifera_M_contig11917.3948.1 vs. uniprot
Match: A0A850XI52_PIACA (CCD97 protein (Fragment) n=1 Tax=Piaya cayana TaxID=33601 RepID=A0A850XI52_PIACA) HSP 1 Score: 55.5 bits (132), Expect = 1.100e-5 Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 247 DRGYWARPC-PPDSARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKRAGEE 420
+RG W RP P R+RNRRY L++L + G +FS+EAM+ R+P L+ Y+G+ G E
Sbjct: 51 ERGVWGRPRRSPARTRLRNRRYAALRRLIQEGDYFSEEAMRAREPLLYHHYIGRYRGAE 109
BLAST of mRNA_M-pyrifera_M_contig11917.3948.1 vs. uniprot
Match: A0A1D1YCT0_9ARAE (Coiled-coil domain-containing protein 97 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YCT0_9ARAE) HSP 1 Score: 55.1 bits (131), Expect = 4.740e-5 Identity = 25/41 (60.98%), Postives = 34/41 (82.93%), Query Frame = 1
Query: 283 SARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGK 405
SA V+NRR L+QL +GGV+FS+EAM+ER+P+L EYVG+
Sbjct: 130 SATVKNRRRAYLEQLVQGGVYFSEEAMREREPYLHHEYVGR 170
BLAST of mRNA_M-pyrifera_M_contig11917.3948.1 vs. uniprot
Match: UPI001455487F (coiled-coil domain-containing protein 97-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455487F) HSP 1 Score: 55.5 bits (132), Expect = 8.390e-5 Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 292 VRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKRAGEEKPAPRQAVEEVPGSTSVGTYLQESLGFLSQQQTGE 525
VRNRRY L+QL + G +FSD+AMK+RDP+++ EY+G+ E+ Q P S S + + F+ +Q+T E
Sbjct: 127 VRNRRYEALKQLEKAGAYFSDKAMKDRDPFMFEEYIGQYMTAEELKGLQT----PVSQSDLKFSSILMTFMDEQETKE 200
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Protein of unknown function DUF2052, coiled-coil |
| Ec32 ortholog | Ec-16_004690.1 |
| Exons | 3 |
| Model size | 1164 |
| Cds size | 1164 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815711.0677354-CDS-M-pyrifera_M_contig11917:5781..6299 | 1622815711.0677354-CDS-M-pyrifera_M_contig11917:5781..6299 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11917 5782..6299 - |
| 1692277533.5327866-CDS-M-pyrifera_M_contig11917:5781..6299 | 1692277533.5327866-CDS-M-pyrifera_M_contig11917:5781..6299 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11917 5782..6299 - |
| 1622815711.0819707-CDS-M-pyrifera_M_contig11917:7433..7629 | 1622815711.0819707-CDS-M-pyrifera_M_contig11917:7433..7629 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11917 7434..7629 - |
| 1692277533.5428603-CDS-M-pyrifera_M_contig11917:7433..7629 | 1692277533.5428603-CDS-M-pyrifera_M_contig11917:7433..7629 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11917 7434..7629 - |
| 1622815711.0938666-CDS-M-pyrifera_M_contig11917:9029..9479 | 1622815711.0938666-CDS-M-pyrifera_M_contig11917:9029..9479 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11917 9030..9479 - |
| 1692277533.5523055-CDS-M-pyrifera_M_contig11917:9029..9479 | 1692277533.5523055-CDS-M-pyrifera_M_contig11917:9029..9479 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig11917 9030..9479 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11917.3948.1 >prot_M-pyrifera_M_contig11917.3948.1 ID=prot_M-pyrifera_M_contig11917.3948.1|Name=mRNA_M-pyrifera_M_contig11917.3948.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=388bp
SRYGHILTPADLESFLPTEDPGVSVHVARLRTLISQQQQPGHPPTTVGDA DDVDMTPVGTAAAPNTTAAEEAAPPPPVGWGRDRGYWARPCPPDSARVRN RRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKRAGEEKPAPRQAVEE VPGSTSVGTYLQESLGFLSQQQTGEWPTVVPNTAGAGAARAGSSLGMAFL SGMSAGAEGVVGEQAYTESVDVVAGATVDASDLPPSSPAADSRVPSRDHD GDNSTAAVTAAVEAFGIRDEEEGVRGGEGEARLGDQEVSRARVRFVDQEG VVLGGGQDEEEEKEDWEEEEDEDEEDEDEEGDAEMECGVRAGGREEIARV LSERFLAGEEEGVDYRDVDGDERLDDLDQLARDEVRG* back to topmRNA from alignment at M-pyrifera_M_contig11917:5782..9479- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig11917.3948.1 ID=mRNA_M-pyrifera_M_contig11917.3948.1|Name=mRNA_M-pyrifera_M_contig11917.3948.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3698bp|location=Sequence derived from alignment at M-pyrifera_M_contig11917:5782..9479- (Macrocystis pyrifera P11B4 male) AGCCGCTACGGGCACATTCTCACCCCGGCTGACCTGGAGTCCTTCCTCCC
TACCGAGGACCCGGGCGTATCCGTGCACGTTGCACGACTCCGAACCCTCA
TATCCCAGCAGCAGCAGCCCGGACACCCGCCAACAACTGTGGGCGACGCC
GATGACGTCGACATGACGCCCGTGGGTACGGCAGCTGCACCAAACACCAC
GGCAGCAGAGGAAGCGGCGCCGCCGCCGCCAGTAGGCTGGGGGCGCGACA
GGGGGTACTGGGCGCGTCCTTGTCCCCCCGACAGCGCTAGGGTGCGCAAC
CGTCGGTACAGGAGGCTGCAGCAGCTGGCGGAGGGAGGGGTTTGGTTCAG
CGATGAGGCCATGAAAGAGCGGGACCCGTGGCTGTGGTTTGAGTACGTGG
GGAAGCGCGCGGGAGAGGAAAAACCGGCGCCAAGACAAGCGGTGGAGGAG
GTAAGGAGGCGTTTGCCATGAGAGGGGTTGCTTTTTTTTGGCGCATCAGC
TTCCCGACTACCGGGGCTCCTCAACCTTTGCAATCGAGGAGCTATATACC
CAATATACTGGGGATCCGATGCGATTTTGTTTTGACTATACCGTTATATA
GGATTCTGTATCGGGCTTGCGGTAGCTTTACGATTTATCTCGATGTCCGT
CGTTGAGTGAGGTAAACAACCGCTCAACTGAGAAGCCTCATGAAATATAC
CTGGTAGGTGATACCCCTACGACAGCATAGGTCTAGAGATACCCGGACGG
ACGGGAGGGTAACCGGGAAGGGGTGGTACCCGGTGGGGGGTGTACTAGAT
ATCATGCATGGCCGTAGTCGTATGATCATAGACCCGAGGGGGGGGCTGTG
AATCAAGCGGGAAGTGGGTGAGCACGGTAGTACTTGGAGCCTTTCAATCT
GCTGACGTACGTACGTAGCCGGTGAGTGTATAAACTCAAGACGAAGACGG
GAGTTGCAGATATCGGGATTTTGTTTGTTTGCGCGAATCGAAGACGACGA
AAGTGTGGTGTTGGCAGGTCTTCCTACAGTACGCCCGATGGGTGTGGGAC
TGTCGTGGGTGATGCGATGCGGTGATGTTGTGACTGGAGCGATGCCACGG
TGTCTTAGGGGTGTTCCCTTCTTTTCTGAGCTGCTGCCTCACATGAGGAC
TAGCTCAACATCTCACCGGAAACATGACTTTGAAGAACGTTTGTTCACGC
ATCGTCACGCGCTACCCCTAAAACACGCACGAAGTACCAGGTATACTAGT
AAAGCTATCATACTATTTCGGCTGGGCATAGTAAATAGGACCTACGGTAC
ACCCAAAAACCTATATATTTCCCTCTTTTTACTAACAATATTTGGTCCTA
TTTACTATGGTCCCCCGTAATAACTGATAATTTTCTCACTTGGAGGAGCT
CAACCGGTCAGAAAACATTGCCTCAGAAGGCAAATCGTACCGTGAGATGA
CTCGATGTTGTGATGTCGTGATGCCGTCCCTTGCCGGGCCAGGACCGAGT
GTGGCCTCTGTGAATTTATATGCCGCTGTGCTTGCGTTTTACGCTGATAA
TGTTCGACGTGTTTGAAGAGCACGCCTTACGTACATCCAACTGTCGGAAA
CTTGTCCATCATGTCCGTATCACCAGTGATACTGGTGTGCACTCGTCGCA
ACGACCTAACACTGCTGCTCGTACACCATGCAACACAAGTGCCATGCGCC
AAGACGCAGTAGCAGACCGTATCAGGCACACACGCCATAGTTTCAGCAGC
AGAACCAGCAGCAGCAGCAGCAGCAGCGGCAGATTGGTGCATCAAACAGT
ACGTGGCGATGCACGACGCACAACCCACCTTCCTCGCCGAATTGCGCCAG
GTTCCCGGAAGCACATCGGTGGGCACCTACCTCCAAGAAAGCTTGGGATT
CCTATCCCAGCAGCAAACCGGGGAATGGCCTACCGTCGTCCCTAACACTG
CCGGTGCTGGCGCTGCCAGGGCGGGTTCTTCGCTAGGGATGGCGTTTCTT
TCCGGAATGTCTGCGGGAGCGGAGGGGGTAGTCGGGGAGCAGGCATGTTT
TGTACATGGTGCGGCGGAGATGGACACGGCGGCCGAAGACCGCCGACCAA
AAGGTACGATTGGTTGAATCGACCCCCCCCAATACCGCATACCCACTTCG
TATACGGGCGCGTGCTATCATAGTGGTGCAAACGTTCGTGCGCCTGCTCT
AGGCTGAGCGTGTCGTGTTGATTGGAAAGTCATGGCAACGGGACATGCCT
ACTTATACAGAGGCCCATAGTATCTAAGCCCAGCGGATTTACATTTATTT
TTACGTTTCCGGAATTGTTTTTGAGGTCATTTTTTTCCCTCATTTTGTCG
ACGAAGCTATCTGCGTCTGGACTATGTTTCGCGTACACCGCGGCAAACAG
GAGCGCTACAAATCAGGATTTAGTATCGACGGAAAGCTGAGGACTTCAGC
TTTCCAACGATGCTACTTATAGCCGCAAATATGGTGTTGCGGATGCGGCA
GAGGTAGGGAAGTAGGGTAAGGGTGCCGATCTTTAGGCGCACGTATCTCA
CGAACGACCAAGATTCGCGCAAAACGCTCAGCGCAATTCTGCGACACATA
CCCCAAGCTTTCCAAAAATGCTTAATACGCAAAACTCCGAGGTGACCTCC
GGTCTAAACATCCCCCCCGTTAAAAATAGTATTGTTTTCACTAGCCATTA
TTTTTCATCTCCCCTCTCGTCTTCAACCATAATACTTTCGGCTACAAGTA
CTATTGTTGGTAAGCTGAAATCCTCGGCTTTCCGCCGGTTTTAACCGCGG
GGATATGGTGTGTCTCTGTGGGTCTGTGCGACTGCTTATATATGCACATG
CGAATATTTCCCTTAGAATATGATGGAAAAAAATTCTCACAATAACAATA
ATTCTGAATTGAAAACACTCATACGTGGGCCTGGATACTATGGGCCTCCG
TAATAGGAGCGAGCACCAAGACTCACTTGGGGCCCAAGCGGGGCCGAGGC
GAAGTTTATTCGAGTACACGTGCAGACAGCAGCGGTGCCAGTAGCAGTAG
CATTAGCAACAGCAACGGCAACAACATATCGCAGTAGACACCAGGCTCGG
GTACACCCAATTTTCGCTTGGAAAAAATCGTTTGTTAGCGCGGCACCGAC
ATTCCCCCTTATAACCCCACGAAACTGCAGACACCGAATCTGTCGACGTG
GTGGCGGGGGCAACCGTAGATGCTTCGGACCTTCCACCGTCGTCTCCCGC
TGCCGACTCAAGGGTGCCCTCCCGGGACCACGATGGTGACAACAGTACAG
CGGCTGTCACCGCAGCGGTTGAGGCATTTGGCATCCGGGATGAGGAAGAG
GGGGTAAGAGGAGGCGAAGGGGAAGCGAGGCTCGGCGACCAGGAAGTCAG
TCGTGCGCGCGTGCGGTTCGTTGACCAAGAGGGTGTTGTGCTTGGGGGGG
GGCAGGATGAGGAGGAGGAAAAGGAGGACTGGGAGGAGGAGGAGGACGAG
GACGAGGAGGACGAGGACGAGGAGGGAGATGCTGAGATGGAGTGCGGGGT
AAGAGCGGGCGGGCGCGAGGAGATCGCGCGTGTTCTGTCGGAAAGGTTCT
TGGCCGGAGAGGAGGAGGGCGTCGACTATAGGGACGTCGACGGAGATGAG
AGGCTCGACGACCTGGACCAGCTCGCAAGAGATGAGGTAAGGGGATGA back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig11917:5782..9479- >mRNA_M-pyrifera_M_contig11917.3948.1 ID=mRNA_M-pyrifera_M_contig11917.3948.1|Name=mRNA_M-pyrifera_M_contig11917.3948.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2328bp|location=Sequence derived from alignment at M-pyrifera_M_contig11917:5782..9479- (Macrocystis pyrifera P11B4 male) AGCCGCTACGGGCACATTCTCACCCCGGCTGACCTGGAGTCCTTCCTCCC TACCGAGGACCCGGGCGTATCCGTGCACGTTGCACGACTCCGAACCCTCA TATCCCAGCAGCAGCAGCCCGGACACCCGCCAACAACTGTGGGCGACGCC GATGACGTCGACATGACGCCCGTGGGTACGGCAGCTGCACCAAACACCAC GGCAGCAGAGGAAGCGGCGCCGCCGCCGCCAGTAGGCTGGGGGCGCGACA GGGGGTACTGGGCGCGTCCTTGTCCCCCCGACAGCGCTAGGGTGCGCAAC CGTCGGTACAGGAGGCTGCAGCAGCTGGCGGAGGGAGGGGTTTGGTTCAG CGATGAGGCCATGAAAGAGCGGGACCCGTGGCTGTGGTTTGAGTACGTGG GGAAGCGCGCGGGAGAGGAAAAACCGGCGCCAAGACAAGCGGTGGAGGAG AGCCGCTACGGGCACATTCTCACCCCGGCTGACCTGGAGTCCTTCCTCCC TACCGAGGACCCGGGCGTATCCGTGCACGTTGCACGACTCCGAACCCTCA TATCCCAGCAGCAGCAGCCCGGACACCCGCCAACAACTGTGGGCGACGCC GATGACGTCGACATGACGCCCGTGGGTACGGCAGCTGCACCAAACACCAC GGCAGCAGAGGAAGCGGCGCCGCCGCCGCCAGTAGGCTGGGGGCGCGACA GGGGGTACTGGGCGCGTCCTTGTCCCCCCGACAGCGCTAGGGTGCGCAAC CGTCGGTACAGGAGGCTGCAGCAGCTGGCGGAGGGAGGGGTTTGGTTCAG CGATGAGGCCATGAAAGAGCGGGACCCGTGGCTGTGGTTTGAGTACGTGG GGAAGCGCGCGGGAGAGGAAAAACCGGCGCCAAGACAAGCGGTGGAGGAG GTTCCCGGAAGCACATCGGTGGGCACCTACCTCCAAGAAAGCTTGGGATT CCTATCCCAGCAGCAAACCGGGGAATGGCCTACCGTCGTCCCTAACACTG CCGGTGCTGGCGCTGCCAGGGCGGGTTCTTCGCTAGGGATGGCGTTTCTT TCCGGAATGTCTGCGGGAGCGGAGGGGGTAGTCGGGGAGCAGGCATGTTC CCGGAAGCACATCGGTGGGCACCTACCTCCAAGAAAGCTTGGGATTCCTA TCCCAGCAGCAAACCGGGGAATGGCCTACCGTCGTCCCTAACACTGCCGG TGCTGGCGCTGCCAGGGCGGGTTCTTCGCTAGGGATGGCGTTTCTTTCCG GAATGTCTGCGGGAGCGGAGGGGGTAGTCGGGGAGCAGGCATACACCGAA TCTGTCGACGTGGTGGCGGGGGCAACCGTAGATGCTTCGGACCTTCCACC GTCGTCTCCCGCTGCCGACTCAAGGGTGCCCTCCCGGGACCACGATGGTG ACAACAGTACAGCGGCTGTCACCGCAGCGGTTGAGGCATTTGGCATCCGG GATGAGGAAGAGGGGGTAAGAGGAGGCGAAGGGGAAGCGAGGCTCGGCGA CCAGGAAGTCAGTCGTGCGCGCGTGCGGTTCGTTGACCAAGAGGGTGTTG TGCTTGGGGGGGGGCAGGATGAGGAGGAGGAAAAGGAGGACTGGGAGGAG GAGGAGGACGAGGACGAGGAGGACGAGGACGAGGAGGGAGATGCTGAGAT GGAGTGCGGGGTAAGAGCGGGCGGGCGCGAGGAGATCGCGCGTGTTCTGT CGGAAAGGTTCTTGGCCGGAGAGGAGGAGGGCGTCGACTATAGGGACGTC GACGGAGATGAGAGGCTCGACGACCTGGACCAGCTCGCAAGAGATGAGGT AAGGGGATGAACACCGAATCTGTCGACGTGGTGGCGGGGGCAACCGTAGA TGCTTCGGACCTTCCACCGTCGTCTCCCGCTGCCGACTCAAGGGTGCCCT CCCGGGACCACGATGGTGACAACAGTACAGCGGCTGTCACCGCAGCGGTT GAGGCATTTGGCATCCGGGATGAGGAAGAGGGGGTAAGAGGAGGCGAAGG GGAAGCGAGGCTCGGCGACCAGGAAGTCAGTCGTGCGCGCGTGCGGTTCG TTGACCAAGAGGGTGTTGTGCTTGGGGGGGGGCAGGATGAGGAGGAGGAA AAGGAGGACTGGGAGGAGGAGGAGGACGAGGACGAGGAGGACGAGGACGA GGAGGGAGATGCTGAGATGGAGTGCGGGGTAAGAGCGGGCGGGCGCGAGG AGATCGCGCGTGTTCTGTCGGAAAGGTTCTTGGCCGGAGAGGAGGAGGGC GTCGACTATAGGGACGTCGACGGAGATGAGAGGCTCGACGACCTGGACCA GCTCGCAAGAGATGAGGTAAGGGGATGA back to top
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