mRNA_M-pyrifera_M_contig119112.3928.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: K3WQ01_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ01_GLOUD) HSP 1 Score: 79.7 bits (195), Expect = 1.660e-14 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 1
Query: 1 VDILWIPLLSALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATYALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAAGVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTERNSR-GVPHRCVAASLTAVCVLVFF 459
+ I + L++ L+W F+G + G E+ +P T P A+ +S++ +Y +PL A ++ P W SW +GS S ++ A+ ++ + MY++E D++ + GMAE GL P L RN R PH + ASL + L+ F
Sbjct: 256 ISIDFSLLINTLFWNFNGAVSCSVFGAEVANPGKTYPRAMTISVVLIALSYLVPLFGATAYNS-PHWTSWEEGSLSGVSQAIGGDFLANWIVFATFCSNAGMYIAELFCDSFQILGMAECGLAPKFLQNRNKRFDTPHNAILASLVIILFLIKF 408
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: A0A6U0U068_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0U068_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.700e-14 Identity = 52/150 (34.67%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 4 DILWIPLLSALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATYALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAA-GVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTERNSRGVPHRCVAASLTAVCVL 450
D+ W L++ L+W ++ FD ++ G+++ PR T P A++ +LL TY LP +AA AP + DG F+ +A+ V A G +LA + ++++E DA+ + G+AE G+LPSAL R+ G P +A L+AV V+
Sbjct: 234 DVDWRTLVNVLFWNYNYFDSSSAWAGDVQGPR-TFPVAMVYALLIIFLTYLLPTLAAT--GTAPRDADYCDGCFTNLANNVAGGTALGYWILAAAAISCIGLFIAEMSSDAFQLMGLAERGILPSALARRSKYGTPT--IATLLSAVGVV 378
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: A0A6G0X1Z4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X1Z4_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.810e-14 Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = 1
Query: 13 WIPLLSALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATYALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAAGVAVLAGSVA-----GGFCMYVSETLGDAYTMCGMAETGLLPSALTERN-SRGVPHRCV 420
W L+S L+W F GFD + + GEI +P+A A+LLSL +ATY LPL+AAA + P + +WTDG F IA + G A LA VA F +Y E+ + + + GMA+ G P R+ + G P R +
Sbjct: 187 WTQLISLLFWNFRGFDAMGAYAGEIHNPQANFHRAMLLSLFMISATYMLPLLAAAAVNK-PNYTTWTDGEFPTIAQFI-----GGAWLARWVAISNGVSSFGLYFVESTANGFRLTGMADIGFAPRWFMLRDEATGCPRRSI 322
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: A0A6V7QRK3_ANACO (Uncharacterized protein n=1 Tax=Ananas comosus var. bracteatus TaxID=296719 RepID=A0A6V7QRK3_ANACO) HSP 1 Score: 63.5 bits (153), Expect = 5.000e-9 Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 13 WIPLLSALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATYALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAAGVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTER 390
W + L+W + +D +++ GE++ P T P AL +S++ T+ +Y LPL+A APP +W DG F+ A + + AG+V +Y ++ A+ + GMA+ GLLP R
Sbjct: 56 WRLFFNTLFWNLNFWDSASTMAGEVERPETTFPRALGVSVVVTSLSYLLPLMAGMGVLDAPP-SAWDDGFFADAAGRIAGRWLKYWIEAGAVLSTIGLYEAQLSSGAFQLMGMADLGLLPRFFAHR 180
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: A0A199UD66_ANACO (Putative polyamine transporter n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199UD66_ANACO) HSP 1 Score: 63.2 bits (152), Expect = 9.640e-9 Identity = 39/126 (30.95%), Postives = 65/126 (51.59%), Query Frame = 1
Query: 13 WIPLLSALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATYALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAAGVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTER 390
W + L+W + +D +++ GE++ P T P AL +S++ T+ +Y LPL+A APP +W DG F+ A + + AG+V +Y ++ A+ + GMA+ GLLP R
Sbjct: 214 WRLFFNTLFWNLNFWDSASTMAGEVERPETTFPRALGVSVVMTSLSYLLPLMAGMGVLDAPP-SAWDDGFFADAAGRIAGRWLKYWIEAGAVLSTIGLYEAQLSSGAFQLMGMADLGLLPRFFARR 338
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: A0A368T7N2_9ACTN (Amino acid permease n=1 Tax=Marinitenerispora sediminis TaxID=1931232 RepID=A0A368T7N2_9ACTN) HSP 1 Score: 60.8 bits (146), Expect = 5.900e-8 Identity = 47/141 (33.33%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 34 LYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATYALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAAGVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTERNSR-GVPHRCVAASLTAVCVLV 453
L++AF+G+ VA+LGGE++ PR T+P A+ +++ A Y L + +A P ++ + + +A P V AG+ +S +LG + T+ +A+ G LP ALT + R GVPHR A V VLV
Sbjct: 197 LFFAFAGYARVATLGGEVRDPRRTIPRAIGIAVAVALAVYLL-VCGTVLAVLGPRALAASTAPLADAVAAAGWPQLTPLVAAGAALACLGALLSLSLGVSRTVLALAQDGHLPRALTGLHPRHGVPHRAALAVGAVVAVLV 336
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: A0A0D6QV65_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6QV65_ARACU) HSP 1 Score: 59.7 bits (143), Expect = 1.540e-7 Identity = 39/148 (26.35%), Postives = 73/148 (49.32%), Query Frame = 1
Query: 13 WIPLLSALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATYALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAAGVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTERNSRGVPHRCVAASLTAVCVLVF 456
W + L+W + +D+ ++L GE++ P+ T P ALL + + Y +PL+AA A + W+DG + A + + G+V ++ ++ ++ + GMAE G+LPSA+ +R+S P + S +L +
Sbjct: 221 WSLFFNTLFWNLNFWDNASTLAGEVEHPQRTFPRALLCAGVLACLGYIVPLLAATGALPLDRGL-WSDGFLADAAGLIAGAWLKYGIELGAVLSTVGLFEAQLSSASFQLLGMAEIGILPSAMAKRSSYNTPFMGILFSAGGTLLLSY 367
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: UPI001E3CF21D (amino acid permease n=1 Tax=Mycobacterium sp. MYCO198283 TaxID=2883505 RepID=UPI001E3CF21D) HSP 1 Score: 56.6 bits (135), Expect = 1.810e-6 Identity = 48/154 (31.17%), Postives = 74/154 (48.05%), Query Frame = 1
Query: 13 WIPLL---SALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATY-ALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAAGVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTERNSRGVPHRC--VAASLTAVCVLVF 456
W LL S +++AF GFD VA+ E+K+P+ +P +L SL T Y A+ LV + + + D + + SAV A + G++AG + + LG + M+ GLLP +L + SRG P R + + AV VF
Sbjct: 239 WYGLLAGASIVFFAFIGFDIVATTAEEVKNPQRDVPRGILASLAIVTVLYVAVALVLSGMVSYTQLREAGGDANLATAFSAVGVDWAAKIISIGALAGLTTVVIVLVLGQTRVLFAMSRDGLLPRSLAQTGSRGTPVRITVIVGVVVAVAASVF 392
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: A0A4R1HJV0_9PSEU (Amino acid/polyamine/organocation transporter (APC superfamily) n=1 Tax=Pseudonocardia endophytica TaxID=401976 RepID=A0A4R1HJV0_9PSEU) HSP 1 Score: 55.1 bits (131), Expect = 6.250e-6 Identity = 46/148 (31.08%), Postives = 74/148 (50.00%), Query Frame = 1
Query: 28 SALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATY-ALPLVAAAVADAAPPWVSWTDGSFSKIASA---VVAPAAGVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTERNSRGVPHRCVAASLTAVCVLVFF 459
+ +++AF GFD VA+ E ++P +LP ++ SL+ T Y A+ LV + + ++ +G +ASA V AP A + G++AG + + LG M M+ GLLP+ L + N RG P R T V ++ F
Sbjct: 258 AVVFFAFIGFDAVATTAEETRNPAKSLPRGIIGSLVIVTVLYVAVTLVISGMVPYTE--LATQNGESKTLASAFAIVGAPWAAAIIAVGALAGLTTVVMVLMLGQIRIMFAMSRDGLLPTGLAKTNERGTPGRATWLIGTVVALVATF 403
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Match: UPI00083482FD (amino acid permease n=1 Tax=Nocardiopsis trehalosi TaxID=109329 RepID=UPI00083482FD) HSP 1 Score: 53.9 bits (128), Expect = 1.560e-5 Identity = 46/146 (31.51%), Postives = 68/146 (46.58%), Query Frame = 1
Query: 16 IPLLSALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATYALPLVAAAVADAAPPWVSWTDGSFSKIASAVVAPAAGVAVLAGSVAGGFCMYVSETLGDAYTMCGMAETGLLPSALTERNSR-GVPHRCVAASLTAVCVL 450
I S +++AF GFD VA+ E K+P+ +P + SL+ T Y VAA V P TD ++ AV A AG + G V G + + +G + M+ GLLP L++ + R G P+ + AV VL
Sbjct: 241 IAAASVVFFAFIGFDIVATTAEETKNPKRDMPIGIFGSLIIVTVLYMA--VAAVVTGMRPYTELGTDAPLAEAFRAVGADWAGTLISLGGVIGITSVILVLMMGQSRVAFAMSRDGLLPRGLSKTHPRFGTPYVMTIVTTVAVMVL 384 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119112.3928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119112.3928.1 >prot_M-pyrifera_M_contig119112.3928.1 ID=prot_M-pyrifera_M_contig119112.3928.1|Name=mRNA_M-pyrifera_M_contig119112.3928.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp VDILWIPLLSALYWAFSGFDDVASLGGEIKSPRATLPTALLLSLLATTATback to top mRNA from alignment at M-pyrifera_M_contig119112:1..459- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119112.3928.1 ID=mRNA_M-pyrifera_M_contig119112.3928.1|Name=mRNA_M-pyrifera_M_contig119112.3928.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig119112:1..459- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119112:1..459- >mRNA_M-pyrifera_M_contig119112.3928.1 ID=mRNA_M-pyrifera_M_contig119112.3928.1|Name=mRNA_M-pyrifera_M_contig119112.3928.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig119112:1..459- (Macrocystis pyrifera P11B4 male)back to top |