mRNA_M-pyrifera_M_contig119102.3923.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119102.3923.1 vs. uniprot
Match: A0A485LQR5_9STRA (Aste57867_23886 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQR5_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 6.690e-18 Identity = 59/142 (41.55%), Postives = 75/142 (52.82%), Query Frame = 1
Query: 1 LPPVEWIPHAASSSAVLPLQRVSRVLPQALLSGATSAAWYPKRHMVSEKYVPSLASRLLHPGY---AAQKDGVGFTRRRWSCAHGSFFAGVTSASRLDYIVGKFLEIPASGSLLVANRAAQPHLEALGFEDGVSMLPFNDTD 417
LP + W+PHAAS++ S V P+ LL GAT A +YP R + +HPGY A+ + T H S+ A T SRLDY+V K EIPA+GSLL+ NR A P L ALGF DGV L ++ D
Sbjct: 493 LPRLHWLPHAASAAFSYDDIHPSPV-PRVLLVGATDARYYPLRAWAAASSQTLSIDVHIHPGYEGFASAAEAAAQTAAYARLGH-SYLATFTDTSRLDYLVAKVFEIPATGSLLLVNRDAAPLLAALGFVDGVHYLGYDPHD 632
BLAST of mRNA_M-pyrifera_M_contig119102.3923.1 vs. uniprot
Match: A0A485KAP6_9STRA (Aste57867_1462 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAP6_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 1.380e-11 Identity = 50/140 (35.71%), Postives = 68/140 (48.57%), Query Frame = 1
Query: 10 VEWIPHAASSSAVLPLQRVSRVLPQALLSGATSAAWYPKRHMVSEKYVPSLASRL-----LHPGYAAQKDG--VGFTRRRWSCAHGSFFAGVTSASRLDYIVGKFLEIPASGSLLVANRAAQPHLEALGFEDGVSMLPFN 408
V W+PHAASS + + V P+ LL+G T YP R + ++AS L +HPGY +S S+ T RLDYIV K EIPA+G+LL+ NR A + LGF DGV + ++
Sbjct: 388 VLWLPHAASSVFLFDQLHPAPV-PRVLLTGVTDPTIYPLR-----AWAQTMASSLPIDVHVHPGYEGSDTASEAAAQASSFSTLVHSYLVAFTDTLRLDYIVAKVFEIPATGALLLLNRDAATVVAKLGFVDGVHYMGYD 521
BLAST of mRNA_M-pyrifera_M_contig119102.3923.1 vs. uniprot
Match: A0A024UVA1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVA1_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.200e-10 Identity = 51/146 (34.93%), Postives = 73/146 (50.00%), Query Frame = 1
Query: 10 VEWIPHAASSSAVL------PLQRVSRVLPQALLSGATSAAWYPKRHMVSEKYVPSLASRLL-HPGY---AAQKDGVGFTRRRWSCAHGSFFAGVTSASRLDYIVGKFLEIPASGSLLVANRAAQPHLEALGFEDGVSMLPFNDTD 417
+ W+PHAA+S+ P+ RV LL GA +A +YP R ++K V L + HPGY A+ + + T H S+ A T SRLD++V K EIPA+GSLL+ N + LGF DG + ++ D
Sbjct: 335 IAWLPHAANSAFQYDNIHPAPVTRV-------LLVGAANAEFYPLRAW-AQKQVGKLPLDVHPHPGYEGYASDTEALAQTTSYARLVH-SYVATFTCTSRLDFVVAKIFEIPATGSLLLINHDVADLMARLGFADGTHYIGYDPHD 471
BLAST of mRNA_M-pyrifera_M_contig119102.3923.1 vs. uniprot
Match: A0A1V0SAJ9_9VIRU (Glycosyltransferases group 1 n=1 Tax=Catovirus CTV1 TaxID=1977631 RepID=A0A1V0SAJ9_9VIRU) HSP 1 Score: 58.5 bits (140), Expect = 2.170e-7 Identity = 40/134 (29.85%), Postives = 64/134 (47.76%), Query Frame = 1
Query: 10 VEWIPHAASSSAVLPLQRVSRVLPQALLSGATSAAWYPKRHMVS--EKYVPSLASRLLHPGYAA--QKDGVGFTRRRWSCAHGSFFAGVTSASRLDYIVGKFLEIPASGSLLVANRAAQPHLEALGFEDGVSML 399
V W HA ++ ++ P+ LLSGA A+ +++M+ + + L HPGY DG+ + ++ S+ T YIV K+ EIPA+GSLL+A LE +GF DG++ +
Sbjct: 130 VIWCQHAYTNDYLINFN--DNPQPKILLSGAIGTAYPFRKYMLKLQRSECKNQINYLKHPGYKLFDYDDGINKVGKNYATMLNSYLCCFTDCLVHGYIVSKYYEIPATGSLLLAQDPPGDKLEKIGFMDGINYI 261
BLAST of mRNA_M-pyrifera_M_contig119102.3923.1 vs. uniprot
Match: A0A6C0J7G4_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0J7G4_9ZZZZ) HSP 1 Score: 51.6 bits (122), Expect = 6.040e-5 Identity = 39/136 (28.68%), Postives = 66/136 (48.53%), Query Frame = 1
Query: 16 WIPHAASSSAVLPLQRVSRVLPQALLSGATSAAWYPKRH--MVSEKYVPSLASRLLHPGYAAQKDGVGFTRRRWSCAHGSFFAGVTSASRLD--YIVGKFLEIPASGSLLVA-NRAAQPHLEALGFEDGVSMLPFN 408
W PH + + + ++ + +P+ LSG + YP RH ++ K + L HPGY +++ + ++ +F A T +R D YIV KF EI A G+LL+A + + L LGF + + + N
Sbjct: 135 WFPHYVNENLIKNIEFNNDPVPKIFLSGQITQHIYPARHKALIIAKNDERIYY-LSHPGYK-ERNKHDYCGSKYYSLMNNFLAAFTCCARNDRPYIVSKFFEIIACGTLLIAYDEFVKEELRMLGFVENENYISCN 268
BLAST of mRNA_M-pyrifera_M_contig119102.3923.1 vs. uniprot
Match: A0A0L8BRX3_ENSAD (Uncharacterized protein n=7 Tax=Ensifer TaxID=106591 RepID=A0A0L8BRX3_ENSAD) HSP 1 Score: 51.6 bits (122), Expect = 6.900e-5 Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 61 RVSRVLPQALLSGATSAAWYPKRHMVSEKYVPSLASRLL--HPGYAAQKDGVGFTR-RRWSCAHGSFFAGVTSASRLDYIVGKFLEIPASGSLLVANRAAQPHLEALGFED 384
++ +++P + SG +YP R V+E+ V L L+ HPGY R ++S + ++ +R+DY+V K LEIPASG++LVA + +P L+ GF D
Sbjct: 152 KLDKIIPVTVFSGHLFPTFYPWRAQVTEE-VQRLFPTLVYTHPGYDKNHQAPFEVRDEKYSQLISQSYFSISDTTRMDYVVRKHLEIPASGAILVAPES-EP-LKEYGFVD 259 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119102.3923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119102.3923.1 >prot_M-pyrifera_M_contig119102.3923.1 ID=prot_M-pyrifera_M_contig119102.3923.1|Name=mRNA_M-pyrifera_M_contig119102.3923.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp LPPVEWIPHAASSSAVLPLQRVSRVLPQALLSGATSAAWYPKRHMVSEKYback to top mRNA from alignment at M-pyrifera_M_contig119102:126..542+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119102.3923.1 ID=mRNA_M-pyrifera_M_contig119102.3923.1|Name=mRNA_M-pyrifera_M_contig119102.3923.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig119102:126..542+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119102:126..542+ >mRNA_M-pyrifera_M_contig119102.3923.1 ID=mRNA_M-pyrifera_M_contig119102.3923.1|Name=mRNA_M-pyrifera_M_contig119102.3923.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig119102:126..542+ (Macrocystis pyrifera P11B4 male)back to top |