mRNA_M-pyrifera_M_contig1184.3812.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1184.3812.1
Unique NamemRNA_M-pyrifera_M_contig1184.3812.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: D7G8I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I0_ECTSI)

HSP 1 Score: 779 bits (2012), Expect = 1.170e-254
Identity = 413/569 (72.58%), Postives = 472/569 (82.95%), Query Frame = 1
Query:  706 RYLASNSLTGNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYL------------SNSTEIVDEAGDVANVTLPPTGSSLSVTSG----------GEGGGAALVVDTSNVVLYVTASNEDGVYYAGQSIFIQVVYNNDVVVFGSPLLTLRVGDAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDA---------AVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIAGDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSDRSARALYSGGNGTDEFHFSYTVR 2319
            RYL S+SL G+I+R+SSNPL AADL LP PGDNGSLSH+ADIV+++A Q+TF HNVTR PSTG+LGIGDEA +T HF+RKVR+TGE PTL LAT TP DVV+C+SP+AG FADSL+F+YTVSPGDYS+DLSYT++ AL L            +++TEIVDE+G+  NVTLP  GS LSVT G          GEG GA LVVDTSNVVLYVT++N DGVYY G+SIF+QVVYNNDVV+FG+PLLTLRVGDAP YNRRAVYSSGS TS LVFEYIV++GDHTI LDYDGTNALYLPTTTE + +         AVRSKYD+ IDADPTLPPVWSPDTLGAR  I IAGDVTPTVVSVS P TPGG  YGVGE+ID+EVLFTTR++VK SISLPYLLVETG++R G+AQA+Y  GN+TDTLTFRYTVVE D TD FD+LDTRT  RQ+FSTALV+  AAE+KA+SDRP+VDA LFLAVPG  GTISFD+NITLDTEAP+VRSV VTS DGVYG  D I LVC+FSQPVVVVGE  GTPSIGLSLGRSDRS+RA+YSGGNGT +F  SYTV+
Sbjct:   15 RYLDSSSLVGDIRRLSSNPLTAADLALPVPGDNGSLSHNADIVVHAADQDTFVHNVTRTPSTGLLGIGDEATLTAHFSRKVRYTGEPPTLELATATPFDVVSCSSPSAGSFADSLTFSYTVSPGDYSSDLSYTNSGALSLLVSASANDSESTTSTTEIVDESGNDVNVTLPAVGSELSVTGGEEWRRLEAEEGEGEGA-LVVDTSNVVLYVTSTNGDGVYYTGESIFVQVVYNNDVVIFGTPLLTLRVGDAPYYNRRAVYSSGSGTSVLVFEYIVELGDHTIRLDYDGTNALYLPTTTEGSSSPMLSEEPVSAVRSKYDEDIDADPTLPPVWSPDTLGARVSITIAGDVTPTVVSVSCPLTPGGVAYGVGEVIDLEVLFTTRVYVKKSISLPYLLVETGEDRRGDAQANYLSGNMTDTLTFRYTVVEGDSTDRFDILDTRTNGRQKFSTALVKAPAAEVKAASDRPSVDALLFLAVPGDPGTISFDRNITLDTEAPFVRSVTVTSEDGVYGTGDTIGLVCAFSQPVVVVGEAQGTPSIGLSLGRSDRSSRAVYSGGNGTADFELSYTVQ 582          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: A0A836C7I5_9STRA (TFIID_20kDa domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I5_9STRA)

HSP 1 Score: 467 bits (1202), Expect = 5.410e-140
Identity = 323/783 (41.25%), Postives = 428/783 (54.66%), Query Frame = 1
Query:    4 ITFSDGDAAYDRYPSALEVPWNYYEGCEAFVPANAKPARIVLDTLFFLYEVQSSDMTLLLDVENETSVV--IDESSYIRRHQSSSLTDGNVSLPDEPLRVGGSDIVVNTTQPVVTGVFGVN-GNGPFGYNEEVEIRVDFSLPVTAAAAAMAESTDDLAPT-LSLVVGSTSTAKTTTYLTAAAVYATVADLLSGPNXXXXXXXXXXXXXXXXXXXXHSYNDTSAFFKYVVAADDESIDLRYLASNSLTGNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPT-LALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSLSVTSGGEGGGAALVVDTSNVVLYVTASNEDGVYYAGQSIFIQVVYNNDVVVFGSPLLTLRVGDAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDAAVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIAGDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGL------SLGRSDRSARALYSGGNGTDEFHFSYTVR 2319
            ITF+ G   + RY SA+++PWN+YEGC A  P  AKPAR    T  FLY V S ++   L +    ++V   D +SY+RR QS    D  +SL   P  V      V+TT P V  V   + GNG +GY + V ++V F LPV           DD +P  L+LV+G       +      A YA  A  L+ P+                       +DTS F  Y VAADD S  L Y  + SL+G I R SS+P+  ADLTLPAPG          I +N+A Q T  ++V+  PS+G   IG    + V FTR V+ +G     L L  G+   ++  T+ +A  FA ++S  Y V PG  S+DL Y ST +L     T +VD +G   ++TLPP GS  S+      G + +VV  ++++  V +   DG YY G+SIFI+V Y++ VVV G PLL +++G  P+Y+ RA Y SGSETS L+FEYIVQ G++TI L YDGTNA+Y PTT EA  AA+++  D   DAD ++P  WS   L   + I++   + P VV VS   TP G  YGVGE I + V F+ R++VK SISLPY+ +  G      + A Y GGN T T+ F Y V   D   +FD  DTRT +RQ FS AL +P  AEIKA+S RPT DA L L  PG  G+IS    IT+DT  P V  V VTS DGVY  DD I L+  F+QPVV  G    +PS+ L      ++G      RA Y  GNGT + H  Y V+
Sbjct: 1756 ITFAGGTGKFQRYASAVQIPWNWYEGCAAMFPMYAKPARADSSTAAFLYTVSSGEVANPLGLGAAAAIVPCCDTNSYVRRSQSKPTMDAFLSLVLPPPLVN-----VDTTAPAVVSVAEYDYGNGAYGYGDVVILQVTFDLPVVV---------DDASPPQLALVIGRVVAGMPSISTVVPATYA-AASSLAVPSSLPP-------------------DDTSIFLMYTVAADDFSASLTYQDTASLSGTIWRASSHPITPADLTLPAPGTL------TGITVNAASQPTVVYSVSAVPSSGSFNIGGTVNIVVRFTRPVKLSGSGSLMLDLDVGSSY-LIYATASSADAFASTISLQYDVKPGHKSSDLDYRSTASLTTPTGTVVVDASGTAVDLTLPPPGSPQSLA-----GTSDIVVAGTSMIWSVDSLTPDGTYYTGESIFIRVRYSSPVVVVGVPLLMMKIGTDPNYHTRATYVSGSETSDLIFEYIVQPGENTIRLGYDGTNAIYYPTTVEA-HAAIKTAEDLDTDADTSMPETWSLSQLNDEAYIQVDTGI-PVVVDVST-DTPHG-VYGVGEHIVLNVQFSKRVYVKRSISLPYMELPAG------SIAPYVGGNNTYTMGFEYVVQPGDSVALFDYRDTRTWKRQNFSYALQKPPVAEIKAASARPTTDAELVLPCPGQHGSISNKTTITIDTTQPTVHRVTVTSPDGVYFTDDVIELLVEFTQPVVFTGTSV-SPSLLLRSQTRAAVGGVRGERRASYVSGNGTAQLHLQYVVQ 2481          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: A0A7X2D3G8_9PROT (DUF4347 domain-containing protein n=2 Tax=Roseospira navarrensis TaxID=140058 RepID=A0A7X2D3G8_9PROT)

HSP 1 Score: 204 bits (520), Expect = 5.320e-51
Identity = 192/559 (34.35%), Postives = 253/559 (45.26%), Query Frame = 1
Query:  664 FKYVVAADDESIDLRYLASNSLTGNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSLSVTSGGEGGGAALVVD--TSNVVLYVTASNEDGVYYAGQSIFIQVVYNNDVVVF---GSPLLTLRVGDAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDAAVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIAGDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITL-DTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSDRSARALYSGGNGTDEFHFSYTVRA 2322
            F Y V A D + DL Y  + +L  N   +       A LTL +PG  GSL  +A + I+          V      G  G G    VTV F   V  TG  PTL L TG      T    A+G    +L+F YTV  GD +ADL Y ST AL L+  T I D AG+ A +TLP  G++ S+     G  A +V+   T+  V  V +S  DG Y  G ++ + V ++  V V    G+P LTL  G                 S   F Y VQ GD    LDY GT AL L   T    A          DA  TL    +  +LGA + + I G   P V  VSA    G  +YG G  I + V F   + V  +   P L +ETG     +  A+YA G+ T TL+F YTV   D     D + T        S   ++ AA            DA L L  PGA G++   K+I + D  AP V  V  ++ DG YG+ D +T+   F +  V V   GGTP++ L  G +DR A   Y+ G+GTD   F+YTV+A
Sbjct: 1038 FSYTVQAGDTAADLDYTGTGALALNGGTIKDGTGNDATLTLASPGAAGSLGDNAAVAIDGTAPTV--SGVASTTGNGAYGAGSTIAVTVTFDEAVTVTGT-PTLTLETGATDRAATY---ASGSGTTTLTFNYTVQGGDLAADLDYVSTAALSLAGGT-IKDAAGNDAALTLPSPGAAGSL-----GANADIVITDLTAPTVAGVASSTADGAYGIGDTVTVTVQFDEAVTVTTTGGTPTLTLETGTXXXXXXXXXXXXXXXLS---FTYTVQAGDTAADLDYTGTTALALNGGTIKDGAGN--------DATLTLATPGAAGSLGANAALAIDG-TAPAVTGVSATTADG--SYGAGSTITVTVTFDETVTVTGT---PALTLETG---ATDRAATYASGSGTTTLSFSYTVQAGDLAADLDYVSTGALA---LSGGTIKDAAGN----------DATLTLPSPGAAGSLGASKDIAIVDLTAPTVAGVASSTADGAYGIGDTVTVTVQFDE-AVTVNTTGGTPTLTLETGATDRPA--TYASGSGTDTLSFTYTVQA 1548          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: A0A2E4JTG3_9ARCH (Fibronectin type-III domain-containing protein n=1 Tax=Thaumarchaeota archaeon TaxID=2026795 RepID=A0A2E4JTG3_9ARCH)

HSP 1 Score: 202 bits (515), Expect = 2.690e-50
Identity = 224/741 (30.23%), Postives = 331/741 (44.67%), Query Frame = 1
Query:  133 TLFFLYEVQSSDMTLLLDVENETSVVIDESSYIRRHQSSSLTDGNVSLPDEPLRVGGSD--------IVVNTTQPVVTGVFGVNGNGPFGYNEEVEIRVDFSLPVTAAAAAMAESTDDLAPTLSLVVGSTSTAKTTTYLTAAAVYATVADLLSGPNXXXXXXXXXXXXXXXXXXXXHSYNDTSAF-FKYVVAADDESIDLRYLASNSLT---GNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSLSVTSGGEGGGAALVVDTSNVVLY-VTASNEDGVYYAGQSIFIQVVYNNDVVVFGSPLLTLRVGDAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDAAVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIAGDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSDRSARALYSGGNGTDEFHFSYTV 2316
            TL F Y V + + +  LD  + T+++++         S ++TD + +  D  L V G+         +V++   P V+ V  V  +  +G  + + + ++F+  VT              P L+L  G+T                 V    SG                         + T+A  F+Y+VA  D S DL Y  + +L    G+I     N    A+L LPA G  GSLS    +VI+                          ++   F+  V  +G  P L L TG   D V   S   G     LSF Y V+PGD SADL YT TTAL L NS  I D AG+VA++TL   GS+ S+     G   ALV+D    ++Y V++S+ DG+Y  G ++ I + +++ V V G+P LTL  G +   +  A Y  GS T+TL F YIV  G     LDYD T +L L   T       RS    T+    TLP   S  +LGA   + I G + P V +VS+  T G  TY +G+ +DI V F+  + V  +   P L +ETG     +A   Y  G+ T TLTF++T+   + +   D  DT         TAL     + + A+ +     A + L +P + G++ + K + +D  AP V SV  T+ D  Y + D + +   F++ V V G    TP + L  G SD  A   Y+ G+GT    F Y V
Sbjct:  908 TLTFNYRVANGNSSSDLDYRDTTAMILN---------SGTITDASGNNADLILPVPGNAGSLGANKALVIDGVIPTVSSVTSVAADTAYGAGDTLLLTLNFNKAVTVTGT----------PQLALETGTTDA---------------VISYASG-------------------------SGTNALNFQYIVATGDTSSDLDYTGTTALALGDGSIVDAVGN---TANLILPAVGAAGSLSASKTLVIDGVMXXXXXXXXXXXXXXXXXXX--TLLIVATFSEAVLVSGT-PQLTLETGAA-DAVADYSTGGGTAL--LSFQYIVAPGDISADLDYTITTALAL-NSGTITDAAGNVADLTLQTPGSTGSL-----GASKALVIDGIAPIVYTVSSSSTDGIYNIGDTLAIAITFSDTVTVTGTPQLTLETGSS---DALAAYHIGSGTTTLNFRYIVANGHIASDLDYDSTASLALNGGT----INDRSGNAATL----TLPVPGSSGSLGAEKALVIDG-IAPIVSAVSSSATDG--TYSIGDTLDISVTFSEEVSVSGT---PQLTLETGTT---DAVVDYTSGSGTSTLTFKFTIARGNTSSDLDYTDT---------TALALNGGSIMDAAGN----SANVILPLPDSTGSLGYTKALVVDGGAPLVSSVSSTAVDSSYIIGDTLAITMVFTEAVAVTG----TPKLTLETGTSD--AVIYYAAGSGTSTLSFEYVV 1535          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: D7G8H9_ECTSI (VCBS protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H9_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.060e-48
Identity = 95/124 (76.61%), Postives = 108/124 (87.10%), Query Frame = 1
Query:    1 QITFSDGDAAYDRYPSALEVPWNYYEGCEAFVPANAKPARIVLDTLFFLYEVQSSDMTLLLDVENETSVVIDES-SYIRRHQSSSLTDGNVSLPDEPLRVGGSDIVVNTTQPVVTGVFGVNGNG 369
            +++F+ GDAAY+RYPSALEVPWN+YEGCEAFVPANAKP RIV DTL FLY+V+ SD    LDV N+T+V +DES SYIRRHQS SLTDGN SLPDEPLR  GS+IVVNTTQPVVTGV+GVNGNG
Sbjct:  979 EVSFTAGDAAYERYPSALEVPWNFYEGCEAFVPANAKPTRIVQDTLVFLYQVEKSDAAWRLDVGNDTTVEVDESTSYIRRHQSRSLTDGNTSLPDEPLRASGSNIVVNTTQPVVTGVYGVNGNG 1102          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: A0A2E4JT59_9ARCH (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Thaumarchaeota archaeon TaxID=2026795 RepID=A0A2E4JT59_9ARCH)

HSP 1 Score: 194 bits (492), Expect = 1.650e-47
Identity = 182/559 (32.56%), Postives = 268/559 (47.94%), Query Frame = 1
Query:  664 FKYVVAADDESIDLRYLASNSLT---GNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSLSVTSGGEGGGAALVVDT-SNVVLYVTASNEDGVYYAGQSIFIQVVYNNDVVVFGSPLLTLRVGDAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDAAVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIAGDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSDRSARAL--YSGGNGTDEFHFSYTVRA 2322
            F YVV    ES DL Y  +++LT   G I+  S N    A LTL  PG+ GSL ++ D+V++          VT     G   IGD   +TV  T  V  TG  P L L TG+   V    +  +G  ++ ++F Y V  GD S DL Y S TAL L+  T I D AG+ A V+L   G++ S++S       +L++D  + VV  V++   DG Y  G ++ I + +N ++ V GSP LTL  G +   +  + + SG  ++ + F YIV+ G ++  LDY  T++L L + T   D A         D   +LP      +L A   + I G + PTV +VS+    G   Y +G+ I + V F+  + V  +   P L V TGD         YA G+ T+TLTF Y V   DY    D L T        ++ +++  A            DA + L   GA G++  +K+I +D   P V +V   + DG+Y + D I +  +F++ V V G    TP + LS G    SA  L  Y  G+GT    F Y V +
Sbjct:   55 FDYVVEGGHESNDLDYTNTSALTLNGGTIKDFSGNN---ATLTLILPGNTGSLGNNKDLVVDGIIAAV--SGVTSAEIDGYYNIGDTLDITVSLTETVNVTGT-PQLDLETGS---VDHSANYISGSGSEIITFQYIVQAGDASLDLDYLSNTALDLNGGT-IYDVAGNSAEVSLAAPGAAGSLSSI-----KSLIIDGGAPVVTMVSSQTSDGTYIIGDTLNINITFNENIYVSGSPQLTLETGSS---DATSSFVSGDSSTIISFRYIVENGHNSGDLDYTSTSSLALNSGT-LQDIAGN-------DVSLSLPIPGQSSSLSANKALIIDG-LQPTVANVSSSLNDG--LYNIGDNIPLTVTFSENVLVTGT---PQLTVATGDSN---TVVDYASGSGTNTLTFNYVVANGDYATDLDYLGTNALA---LNSGVIQDVAGN----------DATVTLVAAGAEGSLGANKDIVVDGIVPTVSNVSTANADGLYMIGDSIVITVTFTEAVGVTG----TPQVNLSTG----SANTLINYVLGSGTTTLSFDYIVES 557          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: A0A2E8VEE6_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E8VEE6_9BACT)

HSP 1 Score: 193 bits (491), Expect = 2.590e-47
Identity = 227/736 (30.84%), Postives = 334/736 (45.38%), Query Frame = 1
Query:  130 DTLFFLYEVQSSDMTLLLDVENETSVVIDESSYIRRHQSSSLTDGNVSLPDEPLRVGG----SDIVVNTTQPVVTGVFGVNGNGPFGYNEEVEIRVDFSLPVTAAAAAMAESTDDLAPTLSLVVGSTSTAKTTTYLTAAAVYATVADLLSGPNXXXXXXXXXXXXXXXXXXXXHSYNDTSAFFKYVVAADDESIDLRYLASNSLTGNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSLSVTSGGEGGGAALVVD-TSNVVLYVTASNEDGVYYAGQSIFIQVVYNNDVVVFGSPLLTLRVG--DAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDAAVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIAGDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSDRSARALYSGGNGTDEFHFSYTV 2316
            DTL F Y V   + +  LD  +  ++V++  S     + +   D  ++LP  P  +G      DIVV+ + P VT V   N +G +   + + I + FS  V               P LSL +G+ +                VA+ +SG                           T   F+YVVA    S DL Y ++ SL  N   ++      A L LP PG +GSLS    + I+         +V+     GI   GD   + V F + V  TG  P L+L TG   D     +  +G  + +L F +TV  G+ S DL YT TTAL L N   I D +G+ A +TL P GS+ S+++       ALV+D  + +V  VT+S  D  Y  G +I I VV++  V V G+P LTL  G  DA  Y     Y+SG+ TSTL FEYI++ G  +  L+Y  T A  L   T   DAA  +       A+  +P V S ++      + I G + P + SV      G   Y +G+ + I + F+  ++V   +  P + +ETG++   +A   Y  G+ T+ LTFRYTV   + TD  D + +        + AL   +  +   ++      A L L  PGA G++S +  I++D   P V SV  +S D VY + D I ++ +FS+    V    G P + L  G  D  A A YS GNGT    F YTV
Sbjct: 1064 DTLTFNYTVLDGNFSTDLDYTSANALVLNGGSI----RDNGGNDAILTLP-VPGAIGSLSANKDIVVDGSVPAVTNVTSSNVDGVYIVGDTIVIGLTFSDIVNVTGI----------PQLSLELGNVNG---------------VAEYVSGTGT------------------------TLLNFQYVVAIGQVSSDLDYDSTTSLALNNGTINDQSGNRAVLILPVPGSSGSLSSSKALQIDGIVP--IIDSVSTYAVNGIYSTGDTMDIAVSFNQIVNVTGV-PQLSLETG---DTDVLINYRSGTGSSTLMFRFTVGLGNASNDLDYTDTTALTL-NGGSIRDVSGNNAILTLIPPGSTGSLSAN-----KALVIDGAAPLVSSVTSSALDSTYIVGDTITINVVFSEVVTVTGAPTLTLETGQNDAVLY-----YNSGTGTSTLGFEYIIESGHFSSDLNYVDTLAFSLNGGT-VRDAASNN-------AELFMPSVDSTNSXAGNKALVIDG-IIPIIDSVRTNIDDG--LYKLGDTLGITIAFSEPVYV---VGTPQISLETGNQ---DAVVDYTRGSGTNVLTFRYTVSSGESTDSLDYVGS-------IALALNEGSIKDFGGNN------AILTLPDPGATGSLSENNAISIDGIVPTVFSVSSSSADSVYKIGDAIPILITFSE-AAFVDTSLGKPRLFLETGAQD--AFAEYSAGNGTTVLSFIYTV 1695          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: A0A7Z9UGP7_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9UGP7_9BACT)

HSP 1 Score: 193 bits (490), Expect = 3.910e-47
Identity = 182/559 (32.56%), Postives = 268/559 (47.94%), Query Frame = 1
Query:  664 FKYVVAADDESIDLRYLASNSLT---GNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSLSVTSGGEGGGAALVVDT-SNVVLYVTASNEDGVYYAGQSIFIQVVYNNDVVVFGSPLLTLRVGDAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDAAVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIAGDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSDRSARAL--YSGGNGTDEFHFSYTVRA 2322
            F YVV    ES DL Y  +++LT   G I+  S N    A LTL  PG+ GSL ++ D+V++          VT     G   IGD   +TV  T  V  TG  P L L TG+   V    +  +G  ++ ++F Y V  GD S+DL Y S TAL L+  T I D AG+ A V+L   G++ S++S       +L++D  + VV  V++   DG Y  G ++ I + +N ++ V GSP LTL  G     +  + + SG  ++ + F YIV+ G ++  LDY  T++L L + T   D A         D   +LP      +L A   + I G + PTV +VS+    G   Y +G+ I + V F+  + V  +   P L V TGD         YA G+ T+TLTF Y V   DY    D L T        ++ +++  A            DA + L   GA G++  +K+I +D   P V +V   + DG+Y + D I +  +F++ V V G    TP + LS G    SA  L  Y  G+GT    F Y V +
Sbjct: 1142 FDYVVEGGHESNDLDYTNTSALTLNGGTIKDFSGNN---ATLTLILPGNTGSLGNNKDLVVDGIIAAV--SGVTSAEIDGYYNIGDTLDITVSLTETVNVTGT-PQLDLETGS---VDHSANYISGSGSEIITFQYIVQAGDASSDLDYLSNTALDLNGGT-INDVAGNSAEVSLAAPGAAGSLSSI-----KSLIIDGGAPVVTMVSSQTSDGTYIIGDTLNINITFNENIYVSGSPQLTLETGSN---DATSSFVSGDSSTIISFRYIVENGHNSGDLDYTSTSSLALNSGT-LQDIAGN-------DVSLSLPIPGQSSSLSANKALIIDG-LQPTVANVSSSLNDG--LYNIGDNIPLTVTFSENVLVTGT---PQLTVATGDSN---TVVDYASGSGTNTLTFNYVVANGDYATDLDYLGTNALA---LNSGVIQDVAGN----------DATVTLVAAGAEGSLGANKDIVVDGIVPTVSNVSTANADGLYMIGDSIVITVTFTEAVGVTG----TPQVNLSTG----SANTLINYVLGSGTTTLSFDYVVES 1644          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: A0A2E0PJG5_9BACT (Fibronectin type-III domain-containing protein (Fragment) n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E0PJG5_9BACT)

HSP 1 Score: 192 bits (489), Expect = 5.580e-47
Identity = 227/736 (30.84%), Postives = 334/736 (45.38%), Query Frame = 1
Query:  130 DTLFFLYEVQSSDMTLLLDVENETSVVIDESSYIRRHQSSSLTDGNVSLPDEPLRVGG----SDIVVNTTQPVVTGVFGVNGNGPFGYNEEVEIRVDFSLPVTAAAAAMAESTDDLAPTLSLVVGSTSTAKTTTYLTAAAVYATVADLLSGPNXXXXXXXXXXXXXXXXXXXXHSYNDTSAFFKYVVAADDESIDLRYLASNSLTGNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSLSVTSGGEGGGAALVVD-TSNVVLYVTASNEDGVYYAGQSIFIQVVYNNDVVVFGSPLLTLRVG--DAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDAAVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIAGDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSDRSARALYSGGNGTDEFHFSYTV 2316
            DTL F Y V   + +  LD  +  ++V++  S     + +   D  ++LP  P  +G      DIVV+ + P VT V   N +G +   + + I + FS  V               P LSL +G+ +                VA+ +SG                           T   F+YVVA    S DL Y ++ SL  N   ++      A L LP PG +GSLS    + I+         +V+     GI   GD   + V F + V  TG  P L+L TG   D     +  +G  + +L F +TV  G+ S DL YT TTAL L N   I D +G+ A +TL P GS+ S+++       ALV+D  + +V  VT+S  D  Y  G +I I VV++  V V G+P LTL  G  DA  Y     Y+SG+ TSTL FEYI++ G  +  L+Y  T A  L   T   DAA  +       A+  +P V S ++L     + I G + P + SV      G   Y +G+ + I + F+  ++V   +  P + +ETG++   +A   Y  G+ T+ LTFRYTV   + TD  D + +        + AL   +  +   ++      A L L  PGA G++S +  I++D   P V SV  +S D VY + D I ++ +FS+    V    G P + L  G  D  A A YS G GT    F YTV
Sbjct: 1582 DTLTFNYTVLDGNFSTDLDYTSANALVLNGGSI----RDNGGNDAILTLP-VPGAIGSLSANKDIVVDGSVPAVTNVTSSNVDGVYIXGDTIVIGLTFSDIVNVTGI----------PQLSLELGNVNG---------------VAEYVSGTGT------------------------TLLNFQYVVAIGQVSSDLDYDSTTSLALNNGTINDQSGNRAVLILPVPGSSGSLSSSKALQIDGIVP--IIDSVSTYAVNGIYSTGDTMDIAVSFNQIVNVTGV-PQLSLETG---DTDVLINYRSGTGSSTLMFRFTVGLGNASNDLDYTDTTALTL-NGGSIRDVSGNNAILTLIPPGSTGSLSAN-----KALVIDGAAPLVSSVTSSALDSTYIVGDTIAINVVFSEVVTVTGAPTLTLETGQNDAVLY-----YNSGTGTSTLGFEYIIESGHFSSDLNYVDTLAFSLNGGT-VRDAASNN-------AELFMPSVDSTNSLAGNKTLVIDG-IIPIIDSVRTNIDDG--LYKLGDTLGITIAFSEPVYV---VGTPQISLETGNQ---DAVVDYTRGSGTNVLTFRYTVSSGESTDSLDYVGS-------IALALNEGSIKDFGGNN------AILTLPDPGATGSLSENNAISIDGIVPTVFSVSSSSADSVYKIGDAIPILITFSE-AAFVDTSLGKPRLFLETGXQD--AFAEYSAGXGTTVLSFIYTV 2213          
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Match: UPI00187D56BA (DUF4347 domain-containing protein n=1 Tax=Candidatus Magnetaquicoccus inordinatus TaxID=2496818 RepID=UPI00187D56BA)

HSP 1 Score: 192 bits (487), Expect = 9.330e-47
Identity = 217/737 (29.44%), Postives = 324/737 (43.96%), Query Frame = 1
Query:  136 LFFLYEVQSSDMTLLLDVENETSVVIDESSYIRR-HQSSSLTDGNVSLPDEPLRVGGSDIVVNTTQPVVTGVFGVNGNGPFGYNEEVEIRVDFSLPVTAAAAAMAESTDDLAPTLSLVVGSTSTAKTTTYLTAAAVYATVADLLSGPNXXXXXXXXXXXXXXXXXXXXHSYNDTSAFFKYVVAADDESIDLRYLASNSLTGNIQRMSSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGILGIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSLSFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSLSVTSGGEGGGAALVVDTSN-VVLYVTASNEDGVYYAGQSIFIQVVYNNDVVVF---GSPLLTLRVGDAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYDGTNALYLPTTTEATDAAVRSKYDDTI--DADPTLPPVWSPDTLGARSLIRIAGDVT-PTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLVETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQRFSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAPYVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSDRSARALYSGGNGTDEFHFSYTVRA 2322
            L F Y VQS D T  LD  + +++ ++  +       S++LT   ++ P     +  +  +     P VT V     NG F   + +++ V FS  V         +T    P ++L  GST                  A+ +SG                           T+  F+Y V A D S DL Y+A+ SL+ N   + +   + A LTL  PG   SL ++  I+I++      A + T   + G    GD   VTV F+  V  TG  P + L TG+    V  +S   G           V  GD ++DL YT+TTAL L NS  I D AG+ A +TL   G++ S+     G   A+++DT+   +  V+AS+ +G Y AG ++ + V ++  V V    G+P +TL  G     +R A Y+SG+                   LDY  T+AL          A       D +  DA  TL    + ++LG    I I  D T P+V SVSA    G  +Y VG++I + V F+  + V  +   P L +ETG     +  AS+  G+ +DTLTF YTV   D T     LD   T     +   ++ AA            +A L LA PGA  ++  +K I +DT AP V SV  ++ +G Y     I +  +FS+ V V G    TP I L  G +DR+    Y  G+G+    F+YTV++
Sbjct:  966 LLFTYTVQSGDNTTDLDYTSTSALTLNGGTISDAVGNSATLT---LATPGAANSLAANKNIAVIQVPTVTAVTASTANGSFKAGDTIDVTVTFSEAVNV-------NTSSGTPYITLETGSTDRN---------------ANYVSGSGG------------------------TTLTFRYTVQAGDNSSDLDYVATTSLSANSGTIQNGSGSNASLTLATPGAANSLGNNKAIIIDTIAPTISAVSATT--ANGSYKAGDTVDVTVTFSEAVTVTGT-PQITLETGSTDRTVNYSS---GSXXXXXXXXXXVQAGDNTSDLDYTATTALAL-NSGTIKDGAGNDATLTLASPGAANSL-----GNNKAILIDTTAPTISSVSASSANGSYKAGDTVTVTVTFSEAVNVSTTGGTPSITLETGST---DRNATYASGTXXXXXXXXXXXXXXXXXSDLDYTTTSAL----------AVNGGTIKDAVGNDATLTLASPGAANSLGDNKAIVI--DTTAPSVSSVSATTADG--SYKVGDVIAVTVTFSEAVSVVTTGGTPTLTLETGTT---DRNASFVSGSGSDTLTFHYTVQAGDSTSD---LDYTATTALALNGGTIKDAAGN----------NATLTLATPGAANSLGNNKAILIDTAAPTVSSVSSSTANGTYYAGQSINVTVNFSEAVTVTG----TPQITLETGSTDRTVN--YVSGSGSAALLFTYTVQS 1602          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1184.3812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8I0_ECTSI1.170e-25472.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7I5_9STRA5.410e-14041.25TFIID_20kDa domain-containing protein n=1 Tax=Trib... [more]
A0A7X2D3G8_9PROT5.320e-5134.35DUF4347 domain-containing protein n=2 Tax=Roseospi... [more]
A0A2E4JTG3_9ARCH2.690e-5030.23Fibronectin type-III domain-containing protein n=1... [more]
D7G8H9_ECTSI1.060e-4876.61VCBS protein n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A2E4JT59_9ARCH1.650e-4732.56Fibronectin type-III domain-containing protein (Fr... [more]
A0A2E8VEE6_9BACT2.590e-4730.84Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A7Z9UGP7_9BACT3.910e-4732.56T9SS type A sorting domain-containing protein n=1 ... [more]
A0A2E0PJG5_9BACT5.580e-4730.84Fibronectin type-III domain-containing protein (Fr... [more]
UPI00187D56BA9.330e-4729.44DUF4347 domain-containing protein n=1 Tax=Candidat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1184contigM-pyrifera_M_contig1184:16062..27781 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score792.0
Seed ortholog evalue2.6e-226
Seed eggNOG ortholog2880.D7G8I0
Hectar predicted targeting categoryother localisation
EggNOG OGs2CN6T@1,2QU8Z@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons10
Model size2340
Cds size2340
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1184.3812.1prot_M-pyrifera_M_contig1184.3812.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1184 16062..27781 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815703.795282-CDS-M-pyrifera_M_contig1184:16061..162141622815703.795282-CDS-M-pyrifera_M_contig1184:16061..16214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 16062..16214 +
1692277530.0042377-CDS-M-pyrifera_M_contig1184:16061..162141692277530.0042377-CDS-M-pyrifera_M_contig1184:16061..16214Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 16062..16214 +
1622815703.8065386-CDS-M-pyrifera_M_contig1184:17867..180811622815703.8065386-CDS-M-pyrifera_M_contig1184:17867..18081Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 17868..18081 +
1692277530.0156353-CDS-M-pyrifera_M_contig1184:17867..180811692277530.0156353-CDS-M-pyrifera_M_contig1184:17867..18081Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 17868..18081 +
1622815703.8183823-CDS-M-pyrifera_M_contig1184:19391..197311622815703.8183823-CDS-M-pyrifera_M_contig1184:19391..19731Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 19392..19731 +
1692277530.0245748-CDS-M-pyrifera_M_contig1184:19391..197311692277530.0245748-CDS-M-pyrifera_M_contig1184:19391..19731Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 19392..19731 +
1622815703.8292325-CDS-M-pyrifera_M_contig1184:20243..203881622815703.8292325-CDS-M-pyrifera_M_contig1184:20243..20388Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 20244..20388 +
1692277530.0341418-CDS-M-pyrifera_M_contig1184:20243..203881692277530.0341418-CDS-M-pyrifera_M_contig1184:20243..20388Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 20244..20388 +
1622815703.842722-CDS-M-pyrifera_M_contig1184:21157..212501622815703.842722-CDS-M-pyrifera_M_contig1184:21157..21250Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 21158..21250 +
1692277530.043633-CDS-M-pyrifera_M_contig1184:21157..212501692277530.043633-CDS-M-pyrifera_M_contig1184:21157..21250Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 21158..21250 +
1622815703.8578203-CDS-M-pyrifera_M_contig1184:21729..221101622815703.8578203-CDS-M-pyrifera_M_contig1184:21729..22110Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 21730..22110 +
1692277530.0533087-CDS-M-pyrifera_M_contig1184:21729..221101692277530.0533087-CDS-M-pyrifera_M_contig1184:21729..22110Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 21730..22110 +
1622815703.8677504-CDS-M-pyrifera_M_contig1184:23569..237101622815703.8677504-CDS-M-pyrifera_M_contig1184:23569..23710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 23570..23710 +
1692277530.0704806-CDS-M-pyrifera_M_contig1184:23569..237101692277530.0704806-CDS-M-pyrifera_M_contig1184:23569..23710Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 23570..23710 +
1622815703.877061-CDS-M-pyrifera_M_contig1184:24940..253061622815703.877061-CDS-M-pyrifera_M_contig1184:24940..25306Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 24941..25306 +
1692277530.087674-CDS-M-pyrifera_M_contig1184:24940..253061692277530.087674-CDS-M-pyrifera_M_contig1184:24940..25306Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 24941..25306 +
1622815703.8863528-CDS-M-pyrifera_M_contig1184:26778..269311622815703.8863528-CDS-M-pyrifera_M_contig1184:26778..26931Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 26779..26931 +
1692277530.0999348-CDS-M-pyrifera_M_contig1184:26778..269311692277530.0999348-CDS-M-pyrifera_M_contig1184:26778..26931Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 26779..26931 +
1622815703.89534-CDS-M-pyrifera_M_contig1184:27427..277811622815703.89534-CDS-M-pyrifera_M_contig1184:27427..27781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 27428..27781 +
1692277530.1091487-CDS-M-pyrifera_M_contig1184:27427..277811692277530.1091487-CDS-M-pyrifera_M_contig1184:27427..27781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1184 27428..27781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1184.3812.1

>prot_M-pyrifera_M_contig1184.3812.1 ID=prot_M-pyrifera_M_contig1184.3812.1|Name=mRNA_M-pyrifera_M_contig1184.3812.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=780bp
QITFSDGDAAYDRYPSALEVPWNYYEGCEAFVPANAKPARIVLDTLFFLY
EVQSSDMTLLLDVENETSVVIDESSYIRRHQSSSLTDGNVSLPDEPLRVG
GSDIVVNTTQPVVTGVFGVNGNGPFGYNEEVEIRVDFSLPVTAAAAAMAE
STDDLAPTLSLVVGSTSTAKTTTYLTAAAVYATVADLLSGPNDTTTTSSS
LSSSSLTGGNSSHSYNDTSAFFKYVVAADDESIDLRYLASNSLTGNIQRM
SSNPLAAADLTLPAPGDNGSLSHHADIVINSAYQETFAHNVTRRPSTGIL
GIGDEAVVTVHFTRKVRFTGEEPTLALATGTPIDVVTCTSPAAGYFADSL
SFTYTVSPGDYSADLSYTSTTALYLSNSTEIVDEAGDVANVTLPPTGSSL
SVTSGGEGGGAALVVDTSNVVLYVTASNEDGVYYAGQSIFIQVVYNNDVV
VFGSPLLTLRVGDAPDYNRRAVYSSGSETSTLVFEYIVQVGDHTIHLDYD
GTNALYLPTTTEATDAAVRSKYDDTIDADPTLPPVWSPDTLGARSLIRIA
GDVTPTVVSVSAPHTPGGSTYGVGEIIDIEVLFTTRIFVKDSISLPYLLV
ETGDERGGEAQASYAGGNLTDTLTFRYTVVEDDYTDIFDVLDTRTTRRQR
FSTALVRPAAAEIKASSDRPTVDARLFLAVPGAIGTISFDKNITLDTEAP
YVRSVEVTSGDGVYGMDDEITLVCSFSQPVVVVGEEGGTPSIGLSLGRSD
RSARALYSGGNGTDEFHFSYTVRACPRVA*
back to top

mRNA from alignment at M-pyrifera_M_contig1184:16062..27781+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1184.3812.1 ID=mRNA_M-pyrifera_M_contig1184.3812.1|Name=mRNA_M-pyrifera_M_contig1184.3812.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=11720bp|location=Sequence derived from alignment at M-pyrifera_M_contig1184:16062..27781+ (Macrocystis pyrifera P11B4 male)
CAGATTACGTTCTCAGATGGCGATGCCGCGTATGATCGATACCCGTCCGC CCTTGAAGTTCCGTGGAACTACTACGAAGGATGTGAGGCGTTCGTCCCGG CGAACGCAAAGCCAGCTCGCATCGTACTTGACACGCTGTTCTTTCTCTAC GAGGTGCGTTCTTTGTTTTGTTTGTTTTTAATTCGTACCAGGTGTGTTTT GTTCGTTCCTGGACGACTGTTGTTGTGCACTGTCCACACTTCCGACAGAT CACGATGTACATGCAGTAGATTCTAACCTACCGTTACGAAATGTCGTGCT GGATCTGTGCGCAAAACACATCCCACCCAGGAAACATGCCTTTAGATCAT GCAGAACCCACACCTTGCTTCCATCCCCGGCAACATGAGCTAGGTCATGC ATACCAGGATTACACATATCCTCTAAAAGATCTGGGTAATGAAGTATTAA TAGTGGGAGTCAATGATCTCTGCGCGGTGTGGCTCTGTTGTTTTTCACTA TTTTACAGCGGTAGTAGCTTTCTGTACCAGCTGCGTGTTGCTTTCTTTCG GATAACTTTGACCGATCGTTGTTCTTTCTATGTACGAGCGGTTGCGTCTT GTTTTCTTTCGGGTGCTTTTTTTAAAGATTGTCCGTCCCTTTTTCCGTAC CACCAGGGGTGTGTTGTGTACAAGTCTTACTGTTTATAGTGTGGGTAGGT GCGATTCGTTAATGCTCAGAGTGCTCACGTACTCGGTGCAGGGATACGTG TGAAACGGTTTTTGGGAGTTTCACATAGGAAATATGCGTGTTTCTCCGTG GGGCACTCGACGGTTTGTGCGATGTTTTGCCATCCACTCCCCTTTTGTTC TGTGTACGACGTCGACGATATATGTACATGTACCTTGAGGGGCTTCTACC TCATGTTTGATCCTTCTATATCCTACTTGGTGTCTTCATGTACCCCGTGC GTCCTGCTACCATGAGAGCCAACCCGTGAACCCATCCCGACCCGGCCCAT CACCCTAGTGAGCGCTCCGAACAGTTAACGTTTTAACAGTAGCCCAACAA GACTGCAGCACCTTGACACATGGCATCGTCAAGCAAAACGGGCTCAGAGC CCCCTGTCCCCCTTGGCCTGAGAGAATACCGTGGGGGCGCACAGTAAGAG CACCTTCTGGCCATGTTTCGCCTTTACAGCAGTGTTCTTGTTTTTGCATG GATGGCGTCCGATAGTTTTTTCTTGATGTTGCTTTTTTTGCCGTGGCCGC TCTAGTCTACAGCAGTGCATCCCGCCAACCTTGTGAAGTCCATGATACTG CAGACCACAGCAGCAGTATATTCAACCCGCCAAGAAGCGGAGTGCCGCCG GTATGTTCTTGTTTTCGTGCTGAACAACCCAAGAGTGCAGTGCGACCACG GTGACCGCGCCCGGCTGCATTCTCCCCACTTCCTCGGCTAATAGCGTATA GGCCAACGAGCGTGCCGATGTACTGTGGATATATATGCGCATGGTATGAC ATCTTACCAAACAAAGTAGAACCTGGGCTAAGTGCAGTGGAAGCTTAGCC GAATGTGGTGCAACCTAGTCCAGAAGCGTTGCAACCTACACCCCAAATGC GGTACAAACTTGATCCCAATGCGGTGCAACGTGCAACTGTAACCTGATCC AAAAGGGGTGCAACCTGAGCCAATGAACTATATTCGACACACGTACTGAG CCAATGAACTCCATTCGACACACGTACGTAGATAACCTGTTCAAGTCGCC GGCGTAAACGAATACCTGACGACACGTCCCGTACACCGTTGCCACCCCTC AAGTAGGTCCAGAGCTCGGACATGACTCTCTTGTTAGACGTCGAAAACGA GACCTCCGTTGTGATTGACGAGTCGTCCTACATAAGGCGCCACCAATCCA GCAGCTTGACGGACGGAAACGTAAGCCTGCCCGACGAGCCTTTGCGGGTG GGAGGGAGCGATATCGTCGTTAACACGACGCAACCCGTGGTCACCGGCGT CTTCGGGGTCAACGGCAACGGTGAGGGAGAATATATAAATAGAGTTCTCG ATGTGGTTTGTGTTGGCAGCCTGTTGTTGTATCATGTTTTTCTTGACAAG AGCACTACTGCTGTACGTACCAGTGTCATTTGTACCAGGCGTCGTGAATG AACTACAGCAGTAGTGCTTGGAAATAGTTAGATTTGGTGTTGCCGGGGAA ATCCTTTCGAATGAGTGTCGCGCCAAAAGACTGGGGTATGGTCGCTTGCT GGTTTCTTTGGCCGCCTTATTAGAGTATTGGACTAATACACTATATATTG TGCCGGGCGTCTCGACGAGTCCTTACGTCTATATATTCGATACTGTCGGG GCGGTCCCTCGTACAGTACCACGCCGAAGCTTTGAGCCAGCTCATATTAA TGCGGTGGTCGTACCGCCCTTTTCAATGACGCTATCGCTACTGACGTGCG GTGCCATCCATGCTATTAACACCTCCACCTACCCTAGAAGCGACATATCC GATTGATTGTGTACGGTATCCGACGTTGTTTTGGAAGAACAAGGGGCGAA GGGAGTGAGCGTAGGAGGTGTATTGTAGTACCAGTACCTTTTACACCTCT CGGACAGACAGATCATCTCCAGATAGATCTTATAGATCATCTCCAGATAG ATCTTATAGATCATCTGGGTCCTGGCCTGCCGTCATGAGATGCTGTGCAG GATATGTATAGTACAGATCCAACCCAGGAAACATGTACCTACTACTGTAG ATCATTCAGATTCCGAGGGAACATGAGCTGCTACAGCAGTAGATCATACA TATCAGGAATCTATCTGCCCTAAATGATCTAGATCATTAAGCGGGAGTCG GTGGCGATGTGTCCGATGTGTTGTTTCATTCGTTAGAGACTTAATCCCGT GTATCGGGAACTTACCACAGGGGTGGGCGGCTGAACTATTCGGCGACAAA ATTCAATCTCGAACAAACTCTACGCGAGGAAAAAAGGGATGACGAAAAAA TATGACAACCTGCTCGCCGCCCTGGCCCTATTGCAACGATTTGTTTTAAA AAAGAGTCGCCATTTTCTGTGCCGTGTCAGACAGACACGTACATGTGCTA CGTACCCGCGGTGACAAAAAAACAGAGAACAAAAAAATGAACGGTGAAAA TGTGTCCGATCAGGGCGTACGTACGTATCCTCCCCCCTCCCTAGCGCGTT AGGCTTTATAACGCCAGCAAGTCGGTCGACCCCATTTGCAAAACCAATGA AAAACGTATGCAAGCGGGTGACCTTCTCTACTTCTCGGTGTGCGTGCGTA CGTGCGCGCGTGCGTTCGTGTCCCTCCCAGGCCCTTTTGGGTACAACGAG GAGGTGGAAATTCGCGTAGATTTTTCCCTGCCGGTCACGGCAGCCGCCGC CGCGATGGCGGAGAGTACCGACGATCTCGCACCGACCTTGTCGCTTGTCG TGGGGTCAACGTCGACAGCGAAAACTACCACTTACCTCACGGCGGCCGCG GTGTACGCGACAGTAGCAGATTTATTGTCTGGGCCGAACGACACAACTAC TACCTCGTCGTCGTTGTCGTCGTCTTCTTTGACGGGCGGCAACAGCAGTC ATTCCTACAACGACACCTCGGCTTTCTTTAAGTACGTAGTAGCTGCGGAC GATGAGTCGATTGATCTCAGGTGAGAAGGAGACAACGCATTTTGTACGGG GGTTCTTTTCTGGTGGGCGTCTTTTACTTGGGGGCGAGCGTTTGTTCGTG AGAATACATTATAATGGCATCAGCTTTTGAAGGGGAGGGGTAGGGGTGGT CAACGCCATTTTGTTTTTTCAACCGCCCGCTTCCTTAATCAAAAACGTTA TAACCGGTCTTTCCACCATGTATGACCTACTTGAGGTGCGTTCGCGTTTA AATCAAGATCAAGCAAGACGAGGTGTTTTACTTTTATTTTTTCGGGTGTT TTTTATTCTCGTGTCTCTCGAAGCGAGCTGGTATTCGTATACCTGCTATC TCTCTCCGCACTACTACTATACCTCCGTGGAAATCAACTACCGTATACTG CATACTACTTTTTTCGTCATGAGGAAAGAAGAAGGCCTAAGCTTGCCACC GACAACACTACTGTAGGTTCGTGACAAAAGCAGGAAACGCGCAAACTTAG CCGCCGACAACAATGCGTGACCGCGATCGCAGGTACTTGGCATCGAACTC GCTAACCGGGAACATTCAAAGGATGAGCTCTAACCCTCTCGCTGCAGCTG ATTTGACCCTGCCGGCGCCGGGCGACAACGGCAGCCTCAGCCACCACGCA GACATTGTTATCAACTCTGCGTACCAGGTGCGAAACGTCTACCACGCGTT GATACAGTGATCAGAGTTCGATGCTGCGGATGAATACTGCCGGTATTACC TGTATGTTGGCCGTTACACTAGTAGTACTCTCATGCTCCGAATACTCGCA GTACTCAATACTTCTCAATTCTGCCCAAAAGCCTTTGCTTGATTAAGAAC ATGTCAGTAACCCGTTTTTTTCGCCCCGAGAGTTGAATTTCGCTTTGTGA TTCACAGTCCCAACGGTACGGGTTGTGGAATGTCGCGGTTCAGCAACTGC AAAATATACGCTGATTTTGGTGCTACCATTTTATGGGAAACACGACCCTC AAACCGAAAGTAATTCTTCTGCGAAAAAAGCATGCAGCAAGACCGCACCC CTTTGACGGGATGTCTGCCACATGGAGTTATTGCCGGGGTTCTCCGATTT TTGCACAGCTCCCGACCTCGGACAGATGATCGATTTTCCACCTCATGATC TAAAATAGACCTTTCTGGGCAGATCATCTGTATGATATGTACGATCTACC TCACGTTGACGGGTGGGAGCCATGGAATCTGCATGATCTGCTTTAGGGCA TGTTTCTTGGGTTAGATCTGCCCGATAAGGCAGACCCTGCACAGCGTCTC AGAAAACGTTGGCTAGGATCTACAACAGATTATGTACTGCTGCAGACGAG ATCTGTTCGACGTATCCACAGCTCCCATGCGCTAAGGCAACGTTTCTTCT CTTCCGCGTGTGTGTGACACGCTTTCTCTCTGTTTACCTACCGCAGGAAA CCTTCGCGCATAACGTGACACGGCGTCCTTCTACGGGGATCCTCGGGATC GGCGACGAGGCCGTGGTGACGGTGCACTTTACCCGAAAGGTGGGATGAAA AAAACTTTTGGGAAAAAGAGCGTGCGTTGTCCAGTAACCAGTAACCGCTT GCAGAAAGCCGCCCGGAGGGATTTACATAAAATGTTGGCTCGATCTCTCC CGAATAGGAAATCATTCTTCACTTTTTTTGCGACTGCGAAAAATGTCCCA CACTATTTCCAAGCGGTTTTCCCCCCAAAAGGGGGTTAAGATAAGGGCTT CCCCTGACCAGCGCACGAATATGGACGTTCGTCTGCCTCTCCCGCGCGCT TCGCGTAACTACGACTATTAATGAACCTAACGTTGGGTGCCGCCTACCAC CACCCCGTGCCATTGAGTACCTGCGACGAACTGTGAACAACTGTCCTTTG TGTGGTGCACTACACCACGCCTTTTTGTAACCTGAACCGAACTGACTATC CCCATCCTCCTCCCCCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCCCCC ACCCTCACCTCCCGATAGGTACGCTTTACTGGCGAGGAGCCGACTCTAGC GCTCGCCACCGGCACACCCATCGACGTGGTTACCTGCACCTCTCCAGCCG CGGGGTACTTCGCCGACTCCCTCTCCTTCACGTACACAGTCTCTCCCGGA GACTACTCCGCAGACCTGTCCTACACGTCTACCACCGCGTTGTACCTCTC CAACTCCACCGAAATCGTGGACGAGGCTGGGGATGTCGCGAATGTCACGC TACCCCCGACGGGGTCGTCGCTATCGGTTACTTCGGGGGGGGAGGGGGGA GGAGCAGCTCTTGTGGTGGACACCTCGAACGTTGTGCTGTATGTGACGGC CTCGAACGAGGACGGGGTGTACTATGCCGGGCAGAGCATTTTTATTCAGG TGATATCATGCCGGTAATGCGTTATACGAATGCCTGGTAAAATCTACGTG GTACCAGGTGTGTATACAAAACGTTCAATATATAATACCTGGTACTTGCA CAAATATAGCTAGGGTGTCGACGGATTATTCCAAGGGTTTCACCTAGCAT TCTGGTGCGGAATCGCACACCACGTGCGAGAGACATGCAGAGCCCCGCAA GCAACAGGGTATACTGCGAAGCCTTCGAATATCGTTGTCGCTTGCCAGGA CGAACAAAGGTCCGTATCGAGGACGGTCGCGCCTATCTTTATGCACCCTT GGGACCACCTATCACCAACTTTAACCTAGACTGCACGAATCGATATGTTA TCCCCAAGTGATGGCCCCTCCGCCATTGGGGCGAAAGGGTAGGCCCTACT TCCTAGTATATATATATCCAGGGGGTGGGAGCTTGCATTGATGTTTTGCA GACTGTTTTTGCACCGGGCGTAGGCATAATAGTTGTGCCTATGCAACCGA CTTTTGTGGTGGTTTGTCTCGAGATTGTAAGCATCTTGCGGTGATGCTCA ACGACACGCCGAGTGTGAGCACTTTGTAGTTTGCCGGCGTGCCACGCTGG TGGTAAGATCATTTTTGGCACCAAAATGCGAATGGTGGGTCCGAACCTCT GGGAACGGTACGGTGAGCCCCTGCTCGAACTCATCGTCAAAGAAAACAAT TCCGGGGGCGACTGGGAATCCGCATTCGGTACGTTTTCCCGGTGCCGACA ACCCAGTTTTTTCTACTCGGATACATGATTCCCCTATTGGCCCAGCTTTC TGCGTGGACCCGCGATTTTCGACCGTGAGGAAGCGTGTACGTACGCGTTT GTGAATAGACCGACAGTGTGCGGTGATGTTCGGAAACTAACAGGAAGTTC GGGGCTGTTCACATCTCCCTCCCTTCTCCCCTTTTTGTTTTTCGGCGGTC ACCATGGCTGGTGGTCGAGTTACAATAGATCACGTATTGTGCGGGGTGGA GATCCTTACCTCCGCGCAAGGGAGGCGATCGTGTCACGTAGTATATGTAT GGTCAGGCACCCGCGAGGCGGTTACATAATAAAGTCATTGCTGTCTCTGG AAGTGACACACCGGGAAACAAGTCAAGCCATTCGACGCTGTCATCCGTAC GCAAGAAAATACACACAAAGTGCCGAAGTTCGCCTCACAAGCGGTTCTTA GTAGGATGCAGCTCACCTTTCATGCGGTTCGCCGAATTCTCCGAACACCT CACGGCGCTTCGCGCTTGCTAGAAGCAATGTCTGCCTGGTCGATGAAAAC TCGACGTTGCTCCGTCCCGGCGTTGCAGAGATGCGGGGATCTGTGGTCGC ATGACTACGGCACAGCCATGCCTGATAATGAGTACCCCCCCCCCCCACCC TCCCAAATGCTCCTTTTTTACATCATTGTTACACGTTTCACAACTTTCTC GGCGGCAGGTGGTGTATAACAACGACGTTGTTGTCTTCGGGAGTCCCCTG CTTACATTGCGCGTTGGTGACGCTCCGGACTACAACCGCCGGGCCGTGTA CTCGAGCGGGTCCGAGACGTCCACCCTTGTCTTCGAGTACATTGTGCAGG TACAACGAGCGCATAACGTGCAGGGTGTAGCTATGCGAGTCCCTAGTTTT CATGGCTCCAACAATTCGGGATCCCCTCTGGGGATGTCTGAAACGACCGG CCGACCGGCCGAACGACTGATATCCAACGCACAAAATCTGACGACAATTC ACAACTAGCCTGCTGCGCGAGAGTTTCTACGCATCGGCAGCTATTAAGTA CTGCCTTGGTATTATCGTTCGTTCCGGGCGAAGCTTCCTGCTCAGCCACT GCCGAGGGTAGTAGGTATTTCCTTAGCACAGGTGTGAATCCCTAGCTGTA AGATGTTGACTGAACAAAGCCAAGGCCTTCAAGGCACCGATTTTGACCTT TGGTGTGAGTTGTTAGCTGTTCTCTACCATTTGGGCCAAGCACAATTATC CCCGTTTAGTTGTCACTCCCAATGGTTACGATATTTCCGACCAGAGTGGT ACCAAACAGGGTAATAATATCGTTGTTAAAACCCCACCTTGATAAACAAA ATCGAAACACTTTACGAAACCTCGCACCTCGCGTATGCTGGCCTTGATTG AGCGCTCAAACCACTCCCAACGCACAGTATTTCGCTACTTTTCACAGGCC GGATTTCGTGCGGAACCATTTTTTTCCGTACTGTATTCGGTATCATTAAT CATCAAACTTGTTGTCATTCCCCCCCCTCCTAGGGGACAGCTATTACGGG GGACCATAGTAAATAGGGCCTGCGGCACACGCAAAAGCCTACCAGGTATG TATTTCCCCATTTCCACTATGGCCCCCCGTAATAGTGGCCACAAAAGGCA AAGGAGGAAGGGGACAAGGTAAGCAAAACGTGTTGTATGAAAAAAACGTA GTGAGCGCCCCAATGTTGGAAGTGCCTCTATTAGGAGCAGTAAGAACAGT GCTCCGTCTCGAAACAGATGCGTGGTCAATGGTGAAATGACTACATGGCA AGCAACAAATTTGTACGACCCCACCCCCCGCCCCCCCCCCCCCGCCCCCC CCCCCCCCCCACCCCCCCCCACCACCCCCCCCCCCCCACCCCCCCCGCCC CCCCCCCCCCNNNNNNNNNNGTGGGTTGCCTGTGTTGGGCTGATAAGAGA GCGCCCCCGCGCCACACACGGGGCGGGGGCCGGCGGGCGAGCGTCTCGTG GGGACGCAAAATTTTTGCGCCCCCCCCCCCCCCCCCCCCCGCCCTCCTCG GCGCACGTACATACATACGTAAAAAAAAGGTTGGAGACCACACCATCCAC CTCGACTACGACGGCACCAACGCGCTCTACCTGCCGACAACGACGGAGGC CACCGACGCCGCCGTGCGCTCCAAGTACGACGACACCATCGACGCCGACC CGACGCTGCCGCCGGTCTGGTCGCCGGACACCCTCGGGGCGAGGTCGCTG ATCCGAATCGCCGGAGACGTCACGCCGACGGTCGTGTCGGTGTCCGCGCC CCATACTCCCGGCGGCAGCACGTACGGCGTGGGCGAGATAATCGACATCG AGGTGTTGTTCACGACCCGCATTTTTGTGAAGGACTCGATTTCCTTGCCG TACTTGCTCGTCGAGACCGGTGACGAGCGAGGCGGCGAGGCGCAGGTAAG GGAAGGCTCCTCCAGCAGGGGAATAGTTGCACCACACCACACACACTCAC GAATTAAAATTATATTCTGCGAAGAAGTGGGCCGAATCGTTCGCGTTCCA GGTAAAATAAGTACTACAAAAAAACACCACTATTAATACTACCGTTCTCT TAAGTCTATTTATTCAAGACGCTACAGCAGTAATAAATTTCTACATTCAA GGGATACGATGTATTATTATATATGTACGTACGAGATTCCCCTTCGGGGT GTGGTTGACTTGAAATCCCGAGGGGGTCGTGTATAAGATGATTCAGGCTG GGTAGCACGTATATATCGGTAATACTTAAAGGGGGGGGGGGGGGGTACTT TGCACACGAGCACATAGAGAAGTATACAGCAGTAACAATCTAGTTTCAGC CGCGAAAAAGAAAATTATTATTAGGGATCGGAACCCGATGTGAGAACAAT CTACAGTTTGTTGTCGCAAAGAGAATTCGGCGTTATGGTCCGTCTTCTTG GGCTGAGTGCGTAGTACGTAATTCATTGTGACAGCAGCAACGGGCAATGT TTGGTTGATCGCGTTCGTGGGAACACTATACGTCATGGAACGGTGCTAGC AGACCGGTAGGACATGCGAACAGACAGGGCTGTTGCTTGCAGCTGGACAG CGGTGGCTCGCTGGACCAGGTATTTCGTGATTTCTCGCTATTTCACGAGC TCATCGCTTCAGGAATTTGGCGAGAGGTACAAGCACGTCGGAATTGGAGC CGGCAGTGAGCGATACAGCAGTAACAAGAGTAGCAAGTGTAATAACACAC GCCAGCACAAAAGTATGGCAAGATACGAAGCAACAGCAAAATAGTTGTGC GGCGCGTGCGTTGCTTTATAACGAAAAAGGATCTATCGAGTATTAACTCG GTCTCTCGTCTCCCCTCTTCACTCACTCGTTGGCTGCTTCAGCGAAGTAT CCATCCAGTGCTAATCAGTCATCCTTTCCATGCCCGTCCCCGTCCTGTTT GGCAACCCCTTGTGTCATTTGTTGATGATATCGAACTCGAATATGCCAAG TGCTCTAGTCTGACCGGTGGCATCTTCTTTGCTTGATTTGATTGGATTCT ATTCTCCTTTTCGTATGTGGACGGTCTGATTGGAACAAGCGTCCACATCG TCAGATGGCAAACGGAAAAATACCCCTAATGCTGTACAACAAGTGACACC GGGGTAGGGTCCGCGTCCGCGTGCAGAGCAACCCCGTTGTGGGAGCGCGA CGCTATGCTATATTTAGCCTATGCTAACTCCGTCGTCCCCCTCCTCCTCC TACTGGTTCACCGCCCCTCCTCATTGTCTGGCTGGGTGTAATGCACTACT TTTTATCGTCTCCCCGTCCGCTCATTTTTTTCCGCCCCCCACCTAATCAT CATCGCGTTCGGGTGGGCTGTAAAAAACAACGAAAACGACGGCAAACAAT GTGCCACCCTTCTCAAGGCGAGCTATGCTGGTGGAAACCTTACCGACACC CTGACGTTTCGGTACACCGTCGTGGAAGACGACTACACCGACATTTTCGA TGTCCTCGACACACGAACTACAAGACGCCAGAGATTTTCCACGGCTCTAG TGAGACCAGCTGCTGCAGAAGTGAGTCTATTTTTTACCCGGAGTAGATTT ATGCAAGAAAGTTCGTGCCCGCATTTATCTGAATACATGTACGGTATGTG AGACATTTCGTCGACCAAGGATTTTTCACAAATAAAAGAACACCAACCTA AAAAATTGACCAATCAGAAAACAGGGTACGTTGGGAGACGACGTCGCTAC GCCATACCGAGGCATAACTGTTGAATAAAACATGGACGTGAGGAGGGCCG TAAAGGCATCGAGCGCAATAGTTTGGAGTAAACTAAACGCGAACAAATAA AGTTATCTGGCTGACTAATGTACGGTTGAAGGTGTTCTGGCGTCTTTTGC GACGCAAGCAATGTAAACATCTGCATAAGGTCGTGAAAATCAATAAATCA CTCCAACGAAAAACGAAACCTACCTACCGACCCCTACCTGCCTGCCCACC TATCTACCTGCCCATCCCCGCTCGCCGGTTCTGTCTATACGAACAACTCA CCACGCACATATGCAGATAAAGGCTTCCTCGGATAGACCAACCGTGGACG CGCGCCTCTTCTTGGCCGTTCCCGGAGCCATCGGAACCATCTCCTTCGAC AAAAATATCACGCTCGATACCGAGGCTCCATACGTCCGCTCCGTGGAGGT GACTAGCGGAGACGGCGTGTACGGCATGGACGACGAGATCACCCTCGTTT GCAGTTTTTCGCAGCCCGTGGTCGTGGTGGGGGAGGAAGGGGGCACACCG TCGATAGGTCTGAGCCTCGGCAGGTCGGACCGGAGCGCTCGTGCACTGTA CTCCGGGGGGAACGGCACCGACGAGTTCCACTTCTCCTACACGGTGCGTG CGTGCCCGCGCGTTGCTTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1184:16062..27781+

>mRNA_M-pyrifera_M_contig1184.3812.1 ID=mRNA_M-pyrifera_M_contig1184.3812.1|Name=mRNA_M-pyrifera_M_contig1184.3812.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4680bp|location=Sequence derived from alignment at M-pyrifera_M_contig1184:16062..27781+ (Macrocystis pyrifera P11B4 male)
CAGATTACGTTCTCAGATGGCGATGCCGCGTATGATCGATACCCGTCCGC
CCTTGAAGTTCCGTGGAACTACTACGAAGGATGTGAGGCGTTCGTCCCGG
CGAACGCAAAGCCAGCTCGCATCGTACTTGACACGCTGTTCTTTCTCTAC
GAGCAGATTACGTTCTCAGATGGCGATGCCGCGTATGATCGATACCCGTC
CGCCCTTGAAGTTCCGTGGAACTACTACGAAGGATGTGAGGCGTTCGTCC
CGGCGAACGCAAAGCCAGCTCGCATCGTACTTGACACGCTGTTCTTTCTC
TACGAGGTCCAGAGCTCGGACATGACTCTCTTGTTAGACGTCGAAAACGA
GACCTCCGTTGTGATTGACGAGTCGTCCTACATAAGGCGCCACCAATCCA
GCAGCTTGACGGACGGAAACGTAAGCCTGCCCGACGAGCCTTTGCGGGTG
GGAGGGAGCGATATCGTCGTTAACACGACGCAACCCGTGGTCACCGGCGT
CTTCGGGGTCAACGGCAACGGTCCAGAGCTCGGACATGACTCTCTTGTTA
GACGTCGAAAACGAGACCTCCGTTGTGATTGACGAGTCGTCCTACATAAG
GCGCCACCAATCCAGCAGCTTGACGGACGGAAACGTAAGCCTGCCCGACG
AGCCTTTGCGGGTGGGAGGGAGCGATATCGTCGTTAACACGACGCAACCC
GTGGTCACCGGCGTCTTCGGGGTCAACGGCAACGGCCCTTTTGGGTACAA
CGAGGAGGTGGAAATTCGCGTAGATTTTTCCCTGCCGGTCACGGCAGCCG
CCGCCGCGATGGCGGAGAGTACCGACGATCTCGCACCGACCTTGTCGCTT
GTCGTGGGGTCAACGTCGACAGCGAAAACTACCACTTACCTCACGGCGGC
CGCGGTGTACGCGACAGTAGCAGATTTATTGTCTGGGCCGAACGACACAA
CTACTACCTCGTCGTCGTTGTCGTCGTCTTCTTTGACGGGCGGCAACAGC
AGTCATTCCTACAACGACACCTCGGCTTTCTTTAAGTACGTAGTAGCTGC
GGACGATGAGTCGATTGATCTCAGGCCCTTTTGGGTACAACGAGGAGGTG
GAAATTCGCGTAGATTTTTCCCTGCCGGTCACGGCAGCCGCCGCCGCGAT
GGCGGAGAGTACCGACGATCTCGCACCGACCTTGTCGCTTGTCGTGGGGT
CAACGTCGACAGCGAAAACTACCACTTACCTCACGGCGGCCGCGGTGTAC
GCGACAGTAGCAGATTTATTGTCTGGGCCGAACGACACAACTACTACCTC
GTCGTCGTTGTCGTCGTCTTCTTTGACGGGCGGCAACAGCAGTCATTCCT
ACAACGACACCTCGGCTTTCTTTAAGTACGTAGTAGCTGCGGACGATGAG
TCGATTGATCTCAGGTACTTGGCATCGAACTCGCTAACCGGGAACATTCA
AAGGATGAGCTCTAACCCTCTCGCTGCAGCTGATTTGACCCTGCCGGCGC
CGGGCGACAACGGCAGCCTCAGCCACCACGCAGACATTGTTATCAACTCT
GCGTACCAGGTACTTGGCATCGAACTCGCTAACCGGGAACATTCAAAGGA
TGAGCTCTAACCCTCTCGCTGCAGCTGATTTGACCCTGCCGGCGCCGGGC
GACAACGGCAGCCTCAGCCACCACGCAGACATTGTTATCAACTCTGCGTA
CCAGGAAACCTTCGCGCATAACGTGACACGGCGTCCTTCTACGGGGATCC
TCGGGATCGGCGACGAGGCCGTGGTGACGGTGCACTTTACCCGAAAGGAA
ACCTTCGCGCATAACGTGACACGGCGTCCTTCTACGGGGATCCTCGGGAT
CGGCGACGAGGCCGTGGTGACGGTGCACTTTACCCGAAAGGTACGCTTTA
CTGGCGAGGAGCCGACTCTAGCGCTCGCCACCGGCACACCCATCGACGTG
GTTACCTGCACCTCTCCAGCCGCGGGGTACTTCGCCGACTCCCTCTCCTT
CACGTACACAGTCTCTCCCGGAGACTACTCCGCAGACCTGTCCTACACGT
CTACCACCGCGTTGTACCTCTCCAACTCCACCGAAATCGTGGACGAGGCT
GGGGATGTCGCGAATGTCACGCTACCCCCGACGGGGTCGTCGCTATCGGT
TACTTCGGGGGGGGAGGGGGGAGGAGCAGCTCTTGTGGTGGACACCTCGA
ACGTTGTGCTGTATGTGACGGCCTCGAACGAGGACGGGGTGTACTATGCC
GGGCAGAGCATTTTTATTCAGGTACGCTTTACTGGCGAGGAGCCGACTCT
AGCGCTCGCCACCGGCACACCCATCGACGTGGTTACCTGCACCTCTCCAG
CCGCGGGGTACTTCGCCGACTCCCTCTCCTTCACGTACACAGTCTCTCCC
GGAGACTACTCCGCAGACCTGTCCTACACGTCTACCACCGCGTTGTACCT
CTCCAACTCCACCGAAATCGTGGACGAGGCTGGGGATGTCGCGAATGTCA
CGCTACCCCCGACGGGGTCGTCGCTATCGGTTACTTCGGGGGGGGAGGGG
GGAGGAGCAGCTCTTGTGGTGGACACCTCGAACGTTGTGCTGTATGTGAC
GGCCTCGAACGAGGACGGGGTGTACTATGCCGGGCAGAGCATTTTTATTC
AGGTGGTGTATAACAACGACGTTGTTGTCTTCGGGAGTCCCCTGCTTACA
TTGCGCGTTGGTGACGCTCCGGACTACAACCGCCGGGCCGTGTACTCGAG
CGGGTCCGAGACGTCCACCCTTGTCTTCGAGTACATTGTGCAGGTGGTGT
ATAACAACGACGTTGTTGTCTTCGGGAGTCCCCTGCTTACATTGCGCGTT
GGTGACGCTCCGGACTACAACCGCCGGGCCGTGTACTCGAGCGGGTCCGA
GACGTCCACCCTTGTCTTCGAGTACATTGTGCAGGTTGGAGACCACACCA
TCCACCTCGACTACGACGGCACCAACGCGCTCTACCTGCCGACAACGACG
GAGGCCACCGACGCCGCCGTGCGCTCCAAGTACGACGACACCATCGACGC
CGACCCGACGCTGCCGCCGGTCTGGTCGCCGGACACCCTCGGGGCGAGGT
CGCTGATCCGAATCGCCGGAGACGTCACGCCGACGGTCGTGTCGGTGTCC
GCGCCCCATACTCCCGGCGGCAGCACGTACGGCGTGGGCGAGATAATCGA
CATCGAGGTGTTGTTCACGACCCGCATTTTTGTGAAGGACTCGATTTCCT
TGCCGTACTTGCTCGTCGAGACCGGTGACGAGCGAGGCGGCGAGGCGCAG
GTTGGAGACCACACCATCCACCTCGACTACGACGGCACCAACGCGCTCTA
CCTGCCGACAACGACGGAGGCCACCGACGCCGCCGTGCGCTCCAAGTACG
ACGACACCATCGACGCCGACCCGACGCTGCCGCCGGTCTGGTCGCCGGAC
ACCCTCGGGGCGAGGTCGCTGATCCGAATCGCCGGAGACGTCACGCCGAC
GGTCGTGTCGGTGTCCGCGCCCCATACTCCCGGCGGCAGCACGTACGGCG
TGGGCGAGATAATCGACATCGAGGTGTTGTTCACGACCCGCATTTTTGTG
AAGGACTCGATTTCCTTGCCGTACTTGCTCGTCGAGACCGGTGACGAGCG
AGGCGGCGAGGCGCAGGCGAGCTATGCTGGTGGAAACCTTACCGACACCC
TGACGTTTCGGTACACCGTCGTGGAAGACGACTACACCGACATTTTCGAT
GTCCTCGACACACGAACTACAAGACGCCAGAGATTTTCCACGGCTCTAGT
GAGACCAGCTGCTGCAGAAGCGAGCTATGCTGGTGGAAACCTTACCGACA
CCCTGACGTTTCGGTACACCGTCGTGGAAGACGACTACACCGACATTTTC
GATGTCCTCGACACACGAACTACAAGACGCCAGAGATTTTCCACGGCTCT
AGTGAGACCAGCTGCTGCAGAAATAAAGGCTTCCTCGGATAGACCAACCG
TGGACGCGCGCCTCTTCTTGGCCGTTCCCGGAGCCATCGGAACCATCTCC
TTCGACAAAAATATCACGCTCGATACCGAGGCTCCATACGTCCGCTCCGT
GGAGGTGACTAGCGGAGACGGCGTGTACGGCATGGACGACGAGATCACCC
TCGTTTGCAGTTTTTCGCAGCCCGTGGTCGTGGTGGGGGAGGAAGGGGGC
ACACCGTCGATAGGTCTGAGCCTCGGCAGGTCGGACCGGAGCGCTCGTGC
ACTGTACTCCGGGGGGAACGGCACCGACGAGTTCCACTTCTCCTACACGG
TGCGTGCGTGCCCGCGCGTTGCTTGAATAAAGGCTTCCTCGGATAGACCA
ACCGTGGACGCGCGCCTCTTCTTGGCCGTTCCCGGAGCCATCGGAACCAT
CTCCTTCGACAAAAATATCACGCTCGATACCGAGGCTCCATACGTCCGCT
CCGTGGAGGTGACTAGCGGAGACGGCGTGTACGGCATGGACGACGAGATC
ACCCTCGTTTGCAGTTTTTCGCAGCCCGTGGTCGTGGTGGGGGAGGAAGG
GGGCACACCGTCGATAGGTCTGAGCCTCGGCAGGTCGGACCGGAGCGCTC
GTGCACTGTACTCCGGGGGGAACGGCACCGACGAGTTCCACTTCTCCTAC
ACGGTGCGTGCGTGCCCGCGCGTTGCTTGA
back to top