mRNA_M-pyrifera_M_contig11829.3782.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11829.3782.1
Unique NamemRNA_M-pyrifera_M_contig11829.3782.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: A0A6H5KF38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF38_9PHAE)

HSP 1 Score: 521 bits (1342), Expect = 3.040e-177
Identity = 310/449 (69.04%), Postives = 338/449 (75.28%), Query Frame = 1
Query:  154 TTNAVDCASEGAHFPAAGGPTFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAATGKATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAIRVNAVSYVVVDEVDACLLSEATRSWLHELLARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPSCLTHFYVVCPPEQKLPVLRALIKRELG---STVGAKFSGGDPR--------------------SDPKAIS--------KADTRGLVFALPTKSLDDIASSLDKALGGXXXXXXXXXXXXXXXX------------------------PLAEFLAEELGLNAR 1335
            T N    A  G   P  GG TFRELF GRLPDWLL+RLEQLGF++PTLVQRQAL+VI+GE + DAVLHAQTGSGKTLAFLLP  + V+PSRAAVQ LVVVPTRELGLQVAGVAKRLAA T      K+QVMSVLEGSSNKRQRAWAWADPPHIVIGNPE+L++LV TGA+RVNAVSYVVVDEVDACLLSE TR+ LHELLARSLSPTH+DEDE EDEEEA RL   GAGRV+GAAAP+ R+++DRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMP CL+H YVVCPPEQKL VLRAL+KRELG   S   AK + G P                     S+ +A          +ADTRGLVFAL TK L+ IA+SLDKALGG   XXXXXXXXXXXXX                        PLAEFL EELGLNAR
Sbjct:  157 TPNGAAAADPG---PVNGG-TFRELFRGRLPDWLLTRLEQLGFATPTLVQRQALEVILGEGKHDAVLHAQTGSGKTLAFLLPLLARVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRESKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEEAVRLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHHYVVCPPEQKLAVLRALVKRELGVSASEAAAKLTSGAPPXXXXLGATAVATTAGEGDSPSEGQAGGGGVANTDVQADTRGLVFALATKPLEGIAASLDKALGGRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAQPPQPPLAEFLREELGLNAR 601          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: D8LSP0_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSP0_ECTSI)

HSP 1 Score: 500 bits (1288), Expect = 1.970e-172
Identity = 285/392 (72.70%), Postives = 310/392 (79.08%), Query Frame = 1
Query:  214 TFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAATGKATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAIRVNAVSYVVVDEVDACLLSEATRSWLHELLARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPSCLTHFYVVCPPEQKLPVLRALIKRELGSTVGAKFSGGDPRSDPKAISKADTRGLVFALPTKSLDDIASSLDKALGGXXXXXXXXXXXXXXXX------------------PLAEFLAEELGLNAR 1335
            TFRELF GRLPDWLL+RLEQLGF++PTLVQRQAL+VI+GE + DAVLHAQTGSGKTLAFLLP    V+PSRAAVQ LVVVPTRELGLQVAGVAKRLAA T      K+QVMSVLEGSSNKRQRAWAWADPPHIVIGNPE+L++LV TGA+RVNAVSYVVVDEVDACLLSE TR+ LHELLARSLSPTH+DEDE EDEE AARL   GAGRV+GAAAP+ R+++DRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMP CL+H+YVVCPPE+KL VLR                              DTRGLVFAL TK L+ IA+SLDKALGG    XXXXXXXXXXXX                  PLAEFL +ELGLNAR
Sbjct:    5 TFRELFRGRLPDWLLNRLEQLGFATPTLVQRQALEVILGEEKHDAVLHAQTGSGKTLAFLLPLLGRVDPSRAAVQGLVVVPTRELGLQVAGVAKRLAAGTSSGRDSKIQVMSVLEGSSNKRQRAWAWADPPHIVIGNPESLTRLVTTGAVRVNAVSYVVVDEVDACLLSEGTRASLHELLARSLSPTHADEDEGEDEEGAARLAEVGAGRVTGAAAPVNRKLRDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPPCLSHYYVVCPPEKKLAVLRT-----------------------------DTRGLVFALATKPLEGIAASLDKALGGRGSGXXXXXXXXXXXXXXXXXXXAKGWDEQPPQPPLAEFLRQELGLNAR 367          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: A0A835Z5K4_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K4_9STRA)

HSP 1 Score: 386 bits (992), Expect = 1.200e-126
Identity = 217/349 (62.18%), Postives = 252/349 (72.21%), Query Frame = 1
Query:  208 GPTFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAATGKATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAIRVNAVSYVVVDEVDACLLSEATRSWLHELLARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPSCLTHFYVVCPPEQKLPVLRALIKRELGSTVGAKFSGGDPRSDPKAISKADTRGLVFALPTKSLDDIASSLD----KALGG 1242
            G T+REL+  RLP WL+ RLE+LGF+ PTLVQ++ALD I+  A  DAVLHAQTGSGKTLAFL+P F+ ++PSRA+VQ LVVVPTRELGLQVA VAKRLAAATG ATGG+V VMSVLEGS+N+RQRAWAWA+PPH+VIGNPE LS LVA GA+R N V YVVVDEVDACL S   R+ L  LLAR LSPT + E+E E  +    +   GA   + AA    RRV+ RQTVFASATVPQHNHF+RQCV +QWTL EPVHVQVH KEAMP  LTH YV C P +KL  LRAL++RELG              D         R LVFA   + LD +A++LD    KA GG
Sbjct:   55 GDTYRELYGERLPQWLIERLEELGFAKPTLVQQRALDTIL--AGHDAVLHAQTGSGKTLAFLVPLFACIDPSRASVQGLVVVPTRELGLQVAAVAKRLAAATGAATGGRVMVMSVLEGSNNRRQRAWAWAEPPHVVIGNPETLSALVAGGAVRCNGVRYVVVDEVDACLRSGDARAALTALLARHLSPTFAQEEEAEVPQLPGGVAVTGA---AAAADGARRRVRARQTVFASATVPQHNHFMRQCVAQQWTLAEPVHVQVHPKEAMPPGLTHHYVTCAPAKKLAALRALVRRELGG-------------DGXXXXXXAPRALVFAQANRPLDQMAAALDADLRKARGG 385          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: A0A7S4MVY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVY5_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.080e-88
Identity = 169/360 (46.94%), Postives = 234/360 (65.00%), Query Frame = 1
Query:  214 TFRELFTG-----RLPDWLLSRLEQLGFSSPTLVQRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAATGKATG--GKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAIRVNAVSYVVVDEVDACLLSE---------ATRSWLHELLARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPSCLTHFYVVCPPEQKLPV-LRALIKRELGSTVGAKFSGGDPRSDPKAISKADTRGLVFALPTKSLDDIASSLDKALGG 1242
            +F EL+T       LP WL  R  + G+ +PTLVQR++LD I+     D V+ AQTGSGKTL+FLLP  S ++ SR+A+Q ++VVPTRELGLQ++ VA+RLAAA+G  T   GK+ VM +L+GS NKRQRAWAWA+PPH+V+G P+ L+K+V+ G IR NAV +VVVDEVDACLL+          A+   LHELL+R LSPT+ + D  + +  +A L+++ A  ++G++  +     DRQTVF+SAT+PQHNHF+RQCVQ QWT+ EP HV     E +P  L+H YVVC   +  P+ LR +IKRE+                   + KA    LVF  P + L+++A+++   L G
Sbjct:   90 SFTELYTASSSGEELPLWLTERCSECGWPTPTLVQRRSLDAIL--TGMDVVIQAQTGSGKTLSFLLPLLSKIDASRSAIQAVIVVPTRELGLQISRVARRLAAASGPDTDAKGKIMVMPILQGSRNKRQRAWAWAEPPHVVVGTPDELTKMVSKGGIRYNAVKFVVVDEVDACLLNNGGSIGMSNLASAGPLHELLSRYLSPTYDEVDVLDGD--SASLVSSSAADLAGSSKTVSHGT-DRQTVFSSATIPQHNHFMRQCVQNQWTVREPTHVCASPGELVPPTLSHSYVVCDGNENKPIGLRRIIKREVRRG---------------RLRKA----LVFCEPQRPLENMAAAIAADLNG 425          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: B7FRY7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRY7_PHATC)

HSP 1 Score: 267 bits (682), Expect = 2.220e-79
Identity = 160/358 (44.69%), Postives = 222/358 (62.01%), Query Frame = 1
Query:  214 TFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAATGK-----ATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAI-RVNAVSYVVVDEVDACLLSEA-------TRSWLHELLARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVH-AKEAMPSCLTHFYVVC-PPEQKLPVLRALIKRELGSTVGAKFSGGDPRSDPKAISKADTRGLVFALPTKSLDDIASSLDKALGG 1242
            +F   +   LP WL+ +  + G++ P+ +Q +ALD I+ E R DAV+ A+TGSGKTLA+LLP  + ++ SRAAVQ L+VVPTRELGLQVA VAKRLAAA+ +       GG++ VMSVL+GS N+RQRAWAWA+PPH+VIG P+ L  +V  G I R N+V ++VVDEVDACLL+ A         S LHELL++ LSPT+ D    E ++   R +     + + +  PL  +   RQT+FASAT+PQH HF++QC Q QWTL EP HV +   ++ +P+ L H Y VC   +QKL  LR L+ +    +V            PK +       LVF+   + L+++A  L   + G
Sbjct:  133 SFESRYAAVLPSWLIQKCAECGWTHPSRIQEKALDAILFERR-DAVVQAETGSGKTLAYLLPALASIDGSRAAVQALIVVPTRELGLQVARVAKRLAAASTQNDNVTLNGGRIMVMSVLQGSQNRRQRAWAWAEPPHLVIGTPQELCDMVKLGGIKRYNSVKFIVVDEVDACLLNNAGSLTSNLASSTLHELLSKYLSPTYDDGSANEADDNVLRSVKTST-KTATSTRPLSSQ---RQTIFASATIPQHRHFLKQCAQNQWTLREPTHVCLRPGEQLLPATLEHSYAVCRSTDQKLATLRRLVTKIYAKSV---------IEPPKKV-------LVFSDARRPLEEMAQILANDIEG 469          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: A0A1Z5KA53_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KA53_FISSO)

HSP 1 Score: 264 bits (674), Expect = 2.250e-79
Identity = 160/345 (46.38%), Postives = 211/345 (61.16%), Query Frame = 1
Query:  214 TFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIM-GEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAATGKATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAI-RVNAVSYVVVDEVDACLLSEA-----TRSWLHELLARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PSCLTHFYVVCPPEQKLPVLRALIKRELGSTVGAKFSGGDPRSDPKAISKADTRGLVFALPTKSLDDIASSL 1224
            T  + +  +LP WLL R + LG+  PT +Q  ALDV++  E + D V+ A+TGSGKTL +LLP  + ++P+R+ VQ ++VVPTRELGLQVA VAKRL AA+      K+ +MSVL+GS N+RQRAWAWA+PP +VIG PE LSK+V  G I R N++  VVVDEVDACLL+ A       S LHELL++ LS T  D+DE ED      + A  + R         RR+  RQT+  SAT+PQH HFI+QCVQ +WT TEPV V +   E + P  L H Y+VC PE KL  L+   ++ L S V  K                    LVFA   + L+++A +L
Sbjct:   59 TLLQRYQYQLPSWLLQRCQDLGYIHPTRIQIAALDVLLLDEHKPDVVIQAETGSGKTLCYLLPTLAAIDPTRSTVQAILVVPTRELGLQVAKVAKRLVAASPH----KIYIMSVLQGSQNRRQRAWAWAEPPQVVIGTPEELSKMVQLGGIKRYNSIEMVVVDEVDACLLNNAGSLQLAASPLHELLSKQLSATFLDKDEVED-----TMGALSSTRPK-------RRLHARQTILCSATIPQHKHFIKQCVQNRWTTTEPVLVALQTGEQLLPPTLEHVYMVCRPETKLAALKRFFRKLLSSPVPFKV-------------------LVFAEEQRPLEEMALAL 368          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: A0A7S3VGM2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGM2_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.220e-78
Identity = 162/360 (45.00%), Postives = 223/360 (61.94%), Query Frame = 1
Query:  214 TFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAAT-GKATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAIRVNAVSYVVVDEVDACLL--------SEATRSW-------LHELLARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPSCLTHFYVVCPP-EQKLPVLRALIKRELGSTVGAKFSGGDPRSDPKAISKADT--RGLVFALPTKSLDDIASSLDKAL 1236
            TF E F   +P WL SR ++ G+ +PTL+Q +A+D I+ +  +D ++ AQTGSGKTL +LLP  S ++P+R+++Q ++VVPTRELG+QVA VA+RLAA +    TG K+ VMSVL+GS NKRQRAWA +DPPH+VIG P  L  +V    ++ +AV +VVVDEVDACLL        S++++S        LHELL+R LSPT    +E EDEE   +L       V G  + ++    DRQTVF SAT+PQHNHF++ CVQ QW + EPV+V     E +P  L H YVVC   EQK+  L  +I +++                 +  SK DT  R LVF  P + L+++A  L + L
Sbjct:   58 TFAEHFP-TMPRWLSSRADECGWKNPTLIQHRAIDAILNDG-NDVIIQAQTGSGKTLGYLLPLLSRIDPTRSSIQGIIVVPTRELGVQVARVARRLAAGSVDSETGAKIMVMSVLQGSGNKRQRAWARSDPPHVVIGTPRELGDIVKRKGMKYHAVKFVVVDEVDACLLNNQGTIVSSKSSKSLNVSGSGPLHELLSRYLSPTF---EEAEDEEVIQQLSL-----VEGGGSRIVSHGTDRQTVFVSATIPQHNHFLKSCVQNQWMVREPVYVCASPGELIPPTLKHCYVVCKGMEQKMGGLIRMIHKQIMK---------------RKKSKLDTTCRVLVFCEPKRHLEEMAEILKRDL 392          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: A0A7S2YSE4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSE4_9STRA)

HSP 1 Score: 258 bits (659), Expect = 5.040e-78
Identity = 152/315 (48.25%), Postives = 204/315 (64.76%), Query Frame = 1
Query:  214 TFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAAT----------------GKATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAI-RVNAVSYVVVDEVDACLLSEA-------TRSWLHELLARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAM-PSCLTHFYVV-CPPEQKLPVLRALI 1080
            TF EL+   +P WLL R E+ G+ SPT +Q +AL+ I+ + + DA++ A+TGSGKTL++LLP  + V+ SR+AVQ L+VVPTRELGLQV  VAKRLAAA+                GK    K+ VM+VL+GS N+RQRAWAWA+PPHIVIG P+ L  +V  G I R N+V YVVVDEVDACLL+ A       + S LHELL++ LSPT  D     +E     +  +G  ++     PL    + RQT+FASAT+PQH HF++QC+Q QWTL +PVH+ + + E + P  L H Y+V    ++KL  LR +I
Sbjct:  130 TFSELYESFIPSWLLKRCEECGWESPTRIQEKALNAILRD-KKDAIVQAETGSGKTLSYLLPAMAAVDSSRSAVQVLIVVPTRELGLQVGRVAKRLAAASYNQDPDIGQDPDVGNAGKPQK-KIMVMNVLQGSQNRRQRAWAWAEPPHIVIGTPQELCDMVRYGGIKRYNSVKYVVVDEVDACLLNNAGSMTAKLSSSTLHELLSKYLSPTFDDGSSANEENGIREVAKSGTQQIQSR--PLS---ETRQTIFASATIPQHRHFLKQCIQNQWTLRDPVHISLRSGEQLLPMSLDHAYMVSASSDKKLAALRRII 437          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: A0A7S1TTQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTQ5_9STRA)

HSP 1 Score: 256 bits (654), Expect = 4.280e-76
Identity = 153/323 (47.37%), Postives = 197/323 (60.99%), Query Frame = 1
Query:  214 TFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAAATGKATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAIRVNAVSYVVVDEVDACLLSEATRSWLHELLARSLSPTHSD----------EDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTE---------PVHVQVHAKEAMPSCLTHFYVVCPPEQKLPVLRALIKRELGSTVGAKFSGG 1125
            +FR+L+   LPDWLL RLE+LGF +PTL Q  AL  +   A  D VLHAQTGSGKTLA+LLP  + ++PSRAAVQ L+ VP+RELGLQVA V K+L     K    K+ VMS LEGS  +RQRAWAWA+PPH+VI  P  L  L+ +GAI+ + V+YVVVDE D C+L E   S LHELL+RSL+P H            ED +E EE    L   G    +GA +   +  K RQTVF SAT+PQ  HF+    Q++W             P +V++  +  +P+ L+H + V P E+K   LRAL+KRE   T   +F  G
Sbjct:   57 SFRQLYGTELPDWLLGRLEELGFRNPTLAQEAALGPLF--AGEDVVLHAQTGSGKTLAYLLPLLAQIDPSRAAVQALIAVPSRELGLQVASVLKQLCTTQTKED--KIMVMSALEGSQLRRQRAWAWAEPPHVVISTPPQLQTLIDSGAIKASGVTYVVVDEADNCMLDEGLESPLHELLSRSLNPNHWTSLEIQDLALREDVRELEEAGVALPGLGL-EDAGAGSSGDKSKKRRQTVFCSATIPQSKHFLETTNQRRWLDVRGQDKDAPKLPTYVRLAREAPLPAGLSHAFAVVPREKKAVALRALLKRE---TSAGRFEAG 371          
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Match: W7TME3_9STRA (RNA helicase, DEAD-box type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TME3_9STRA)

HSP 1 Score: 242 bits (618), Expect = 4.320e-70
Identity = 158/381 (41.47%), Postives = 216/381 (56.69%), Query Frame = 1
Query:  214 TFRELFTGRLPDWLLSRLEQLGFSSPTLVQRQALDVIM-GEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVVVPTRELGLQVAGVAKRLAA-------------------------------------ATGKATGGKVQVMSVLEGSSNKRQRAWAWADPPHIVIGNPENLSKLVATGAIRVNAVSYVVVDEVDACLLSEATRSWLHELLARSLSPTHSDEDEKED--------EEEAARLIAAGA---------GRVSGAAAPLMRRVKDRQTVFASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPSCLTHFYVVCPPEQKLPV-LRALIKRELGS---TVGAKFSGGDPRSDPKAISKADTRGLV 1179
            TF +L+  RLP WLL+R+E LG++ PT VQ++AL  I+ GE   D V+H+QTG+GKTLAF+LP  + ++ ++ AVQ LVVVP+RELGLQVA VAK+LA+                                     A+      K+ +MS+LEGS N+RQ+AW  A+PPH+VIGNP +L++LV  G IR + V  VVVDEVDACL S  T   L  LL + LSP+    + +E+        ++E   L+  GA         GRV+   AP   ++  RQT+F SA++PQH HFI+QCVQ+QWTL EP+HV V   E MP  L H Y+V P +   P  L A ++RE           F+  D  ++  A   A + GL 
Sbjct:  117 TFSQLYGDRLPSWLLARVESLGYTRPTAVQKEALGAILEGE---DVVVHSQTGTGKTLAFMLPLLAGIDVNKNAVQALVVVPSRELGLQVASVAKQLASGHMYYRGEDGQEEGRDAENEDPERREEGVGSESMTAGASNVRAAKKILIMSLLEGSKNRRQKAWVLAEPPHVVIGNPRSLAQLVERGGIRYHQVKMVVVDEVDACLTSPETGRELQGLLGKYLSPSFLTAELEEEATATGGSSKDEEGPLLPQGAMKDGGGEKGGRVARKLAPW--KLVHRQTLFVSASIPQHKHFIKQCVQQQWTLREPMHVHVTPGELMPPGLRHGYLVAPTKADKPAALLAFLRRERAKGRLQACVIFTADDREAEKMAAILARSGGLA 492          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11829.3782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF38_9PHAE3.040e-17769.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSP0_ECTSI1.970e-17272.70DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z5K4_9STRA1.200e-12662.18DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S4MVY5_9STRA2.080e-8846.94Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
B7FRY7_PHATC2.220e-7944.69Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KA53_FISSO2.250e-7946.38Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3VGM2_9STRA1.220e-7845.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2YSE4_9STRA5.040e-7848.25Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S1TTQ5_9STRA4.280e-7647.37Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TME3_9STRA4.320e-7041.47RNA helicase, DEAD-box type n=2 Tax=Monodopsidacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11829contigM-pyrifera_M_contig11829:502..3975 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score504.2
Seed ortholog evalue6.2e-140
Seed eggNOG ortholog2880.D8LSP0
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0031974,GO:0031981,GO:0034641,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360
EggNOG free text desc.helicase activity
EggNOG OGsCOG0513@1,KOG0327@2759
COG Functional cat.JKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1335
Cds size1335
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815702.3225129-CDS-M-pyrifera_M_contig11829:501..8851622815702.3225129-CDS-M-pyrifera_M_contig11829:501..885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11829 502..885 -
1692277529.3457372-CDS-M-pyrifera_M_contig11829:501..8851692277529.3457372-CDS-M-pyrifera_M_contig11829:501..885Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11829 502..885 -
1622815702.3340158-CDS-M-pyrifera_M_contig11829:3024..39751622815702.3340158-CDS-M-pyrifera_M_contig11829:3024..3975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11829 3025..3975 -
1692277529.35475-CDS-M-pyrifera_M_contig11829:3024..39751692277529.35475-CDS-M-pyrifera_M_contig11829:3024..3975Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11829 3025..3975 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11829.3782.1prot_M-pyrifera_M_contig11829.3782.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11829 502..3975 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11829.3782.1

>prot_M-pyrifera_M_contig11829.3782.1 ID=prot_M-pyrifera_M_contig11829.3782.1|Name=mRNA_M-pyrifera_M_contig11829.3782.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=445bp
EAAGGPDTRTTGTATAAAAAAAAAAAGVGTPSGESEAPRPATEVLAVAAT
PTTNAVDCASEGAHFPAAGGPTFRELFTGRLPDWLLSRLEQLGFSSPTLV
QRQALDVIMGEARSDAVLHAQTGSGKTLAFLLPFFSLVEPSRAAVQCLVV
VPTRELGLQVAGVAKRLAAATGKATGGKVQVMSVLEGSSNKRQRAWAWAD
PPHIVIGNPENLSKLVATGAIRVNAVSYVVVDEVDACLLSEATRSWLHEL
LARSLSPTHSDEDEKEDEEEAARLIAAGAGRVSGAAAPLMRRVKDRQTVF
ASATVPQHNHFIRQCVQKQWTLTEPVHVQVHAKEAMPSCLTHFYVVCPPE
QKLPVLRALIKRELGSTVGAKFSGGDPRSDPKAISKADTRGLVFALPTKS
LDDIASSLDKALGGGARGGGGGEEGGPEPPPLAEFLAEELGLNAR
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mRNA from alignment at M-pyrifera_M_contig11829:502..3975-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11829.3782.1 ID=mRNA_M-pyrifera_M_contig11829.3782.1|Name=mRNA_M-pyrifera_M_contig11829.3782.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3474bp|location=Sequence derived from alignment at M-pyrifera_M_contig11829:502..3975- (Macrocystis pyrifera P11B4 male)
GAGGCAGCAGGCGGTCCGGACACCAGGACCACAGGAACAGCAACAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCTGGAGTGGGCACGCCTTCAGGAG AAAGCGAAGCACCCCGTCCAGCAACAGAGGTCTTGGCAGTAGCAGCAACA CCAACAACAAACGCCGTAGACTGTGCGTCCGAGGGCGCCCACTTCCCCGC CGCCGGCGGGCCGACGTTCCGCGAGCTTTTCACGGGCCGCCTGCCCGACT GGCTGCTGTCGCGACTGGAGCAGCTGGGCTTCTCCTCGCCGACCCTCGTG CAGCGACAAGCACTGGACGTCATCATGGGCGAGGCCAGGAGCGACGCGGT GCTGCACGCGCAAACTGGAAGCGGCAAGACCCTAGCCTTCTTGCTGCCCT TCTTCTCCCTGGTGGAGCCGTCCCGCGCGGCGGTGCAGTGCCTCGTGGTC GTCCCCACCCGAGAGCTGGGCCTGCAGGTAGCAGGAGTCGCGAAGCGCCT TGCGGCGGCTACGGGAAAGGCCACGGGAGGCAAGGTACAGGTCATGTCCG TCCTAGAAGGGTCCAGCAATAAGCGGCAGCGGGCCTGGGCGTGGGCGGAT CCCCCGCACATCGTCATAGGGAATCCGGAAAATCTCTCGAAGCTTGTCGC TACCGGCGCGATCCGTGTCAACGCCGTTTCCTACGTCGTCGTCGACGAGG TGGACGCGTGTCTGCTCTCCGAGGCCACCCGTTCCTGGCTGCACGAGCTT CTCGCCCGAAGCTTGTCCCCGACGCACTCGGACGAGGACGAGAAGGAGGA CGAGGAGGAGGCGGCGAGGCTGATCGCGGCCGGCGCGGGGAGGGTGTCGG GGGCGGCGGCGCCCTTGATGAGGAGAGTGAAGGACCGGCAGACCGTGTTC GCGAGCGCCACCGTGCCCCAACACAACCACTTCATCCGGCAGTGCGTACA GGTGATAAACAATCCGGGCGCCCGGAAAGGGAAAAAAAAAAAAAAAAAAC TGTCACAGATGTTTTTTCGCTACTAGACAGGGGGGGGGTGTTGCTAGAAC CAAGTAAAAAAAATGAAAAAAAGAAAAAAAGAAAAAATCTTGTTTCATGT CATCACAACGGCTGCAACGGTTTTCCATTCCGACCTCTGGGAGTGTGGTG TGTCGTTTTATATTTTCACGGGCGCCCCTGCCTTTTAAGGTCGATGTTCA CTGGCTTTTTTTTTTCCCTCTCTTTTTTTTTTCCCTCTCGTTTCGCGGAA TTTTCCCAGAAACGCGAAAAAAATGCGATGGGTCCTATTATTAGGGTGTC GCTATCAACTCGATATATATATATTTTTTCTCGTTTCGCGGGATTTTCCC TCAAACGCGAATCACAAGCGGTGGGTCCTATATACAGCGGTACGTATTAT CGTCTGGTACCAGGTACCAGCATCATGTTTCATGAGCTTGCAACGCTCCT CTGTCTGATAAGATCGTCATCTTTTCACTGCTCTTGGGATTCCAGAAAAA ACGCCATCAGTACAAGCGGGATGCTCTAGCTTGCCAGCAGTCTATGATTT TTTTCAACACCTGGAACAGATCTACAAGTAAATACTTTGAGGCAGATAAT ATATTCCTGGTCTGTATGATCTGTATGATCTGTATGATCTGTATGATCTC CAGGATCTGTACGATCTGTATGATCTCTAGGATCTAGCTCGTTTCGCGGG GTGGGAGTCGTGAAATCTGCACGAGTTGGTTCAAGTTTTCCCAGAGTTGG ATATGTACTCCACGGGTCCTGCACAGCGCTTCATTAGCCCTTTTAAGAAT GCCGTCCCGTTTTGGGGACAAACCACTCAAATTCCAAGTAATTTGCCCCC AATTGCCCCCTAAAACGAAACTGTAGTCCTAAAAGGGTTGAGACAGGTTA GGGTCTATACTACCAGTAGTAATATATTTTCTACATCGTGATCCGCCTGA GGTGTGAAATGCGTCGCCGTGTTCCGAGCGTGCCGGCGCAGCAGCACGAG CAGAATCATGCTGCGCGCGTGTCGTGTGACTCGTGAACCTCCTTGGAGTT GTTTGTGGTGGTGGTGGTGGTAGGCCGGGAAGTAATCGGATCATCATCTC ACAAGCTAGTAGAAACAGCAGCCCCGCGTAGCTTGATGTGGTGTATGCTG TATATAGTCGTCCTACTGTTCCGTCGATGCCGCAGAGGTGCGATCATTTT TCAGAATTCGATTTTTTTCTGAACGGGAAGACTGCCGTTACCGAACAGTC GAGGTGTTTTCGGAAAAGATCTGGTCGAGAGCCTTCAGAAAATTACTATT CGGTTTCTACCACCCTTGGCTTACAACAGTACCGTCGTCGAGAAAATGAA CGTTGCTGGAAAACGATCGTTCGTACCCCTGTGCGAAGTCAGCGCCCTTA AGGGGTATCCCAAGAGGGTTAACCCATTTACATGCTATATACAGTATAGT ACCACTCTGTCCCTATAATGATCGTTTGTGTTGAATATTAGTATAGAAGT GTTCACTATATTTCGGGACATAATGGTATAGCGATGGAACATGCGAAAAG TATAGTCTTATCATACTAAGGATAGTGCAAGCATGCGGCACTGCTGAGTA TTTCATGGTCCGTGCGTGTCGCGCGAGTCCTTACATTGTTGCACTCCGAC ATTCCCTGATCAATGGATGCTAAATCCGGTATCATAGGCATGTGTTATCC CTTTACGTTGTCTCTACCCTCCCCCCATCCCCCCTGCCCAAGGCCGCCCC ACATGGAAAACCGCGTGCATACAATACATACGTCGATGTCCGCCCGGAAA CAAAAATGTTGGACCCTGAATCCGTTATCATCGTGTCATATGCATGTGTA TTCCTTCACGCTGTCTCCACCCCTCCCCCCCCTGCCCTCCGCCACCCCAA ATAGAAAACCACATGCATACATGCCGATGCCCTTCCGGAGACAGAAGCAG TGGACAATGAATCGGGTATAATATTGTAGGCATCTGCATTCCTGAACATT GTCCTCACGCCCCCCCCCCCTTGCCCTTCGCCATCCCGAATGGAAAACCA CGCGCGTGCATGGACATGTCGATGGCCGCCCGGAGAACAGAAACAGTGGA CGCTGACGGAGCCGGTGCACGTGCAAGTGCACGCAAAGGAGGCCATGCCC TCGTGCCTCACCCACTTCTACGTCGTGTGCCCCCCGGAGCAAAAGCTGCC CGTCCTCCGAGCTTTGATCAAGCGCGAGCTGGGATCTACAGTTGGGGCTA AATTTAGCGGCGGCGACCCTAGGTCGGACCCGAAGGCGATCTCGAAGGCG GACACGAGAGGCCTCGTTTTTGCGCTGCCCACAAAGTCTCTGGATGATAT TGCGTCGTCCCTGGATAAGGCGTTGGGTGGGGGCGCGCGAGGGGGCGGAG GGGGGGAGGAGGGGGGCCCCGAGCCGCCGCCTCTGGCTGAGTTTCTTGCG GAGGAGCTGGGCTTGAACGCACGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11829:502..3975-

>mRNA_M-pyrifera_M_contig11829.3782.1 ID=mRNA_M-pyrifera_M_contig11829.3782.1|Name=mRNA_M-pyrifera_M_contig11829.3782.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2670bp|location=Sequence derived from alignment at M-pyrifera_M_contig11829:502..3975- (Macrocystis pyrifera P11B4 male)
GAGGCAGCAGGCGGTCCGGACACCAGGACCACAGGAACAGCAACAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCTGGAGTGGGCACGCCTTCAGGAG
AAAGCGAAGCACCCCGTCCAGCAACAGAGGTCTTGGCAGTAGCAGCAACA
CCAACAACAAACGCCGTAGACTGTGCGTCCGAGGGCGCCCACTTCCCCGC
CGCCGGCGGGCCGACGTTCCGCGAGCTTTTCACGGGCCGCCTGCCCGACT
GGCTGCTGTCGCGACTGGAGCAGCTGGGCTTCTCCTCGCCGACCCTCGTG
CAGCGACAAGCACTGGACGTCATCATGGGCGAGGCCAGGAGCGACGCGGT
GCTGCACGCGCAAACTGGAAGCGGCAAGACCCTAGCCTTCTTGCTGCCCT
TCTTCTCCCTGGTGGAGCCGTCCCGCGCGGCGGTGCAGTGCCTCGTGGTC
GTCCCCACCCGAGAGCTGGGCCTGCAGGTAGCAGGAGTCGCGAAGCGCCT
TGCGGCGGCTACGGGAAAGGCCACGGGAGGCAAGGTACAGGTCATGTCCG
TCCTAGAAGGGTCCAGCAATAAGCGGCAGCGGGCCTGGGCGTGGGCGGAT
CCCCCGCACATCGTCATAGGGAATCCGGAAAATCTCTCGAAGCTTGTCGC
TACCGGCGCGATCCGTGTCAACGCCGTTTCCTACGTCGTCGTCGACGAGG
TGGACGCGTGTCTGCTCTCCGAGGCCACCCGTTCCTGGCTGCACGAGCTT
CTCGCCCGAAGCTTGTCCCCGACGCACTCGGACGAGGACGAGAAGGAGGA
CGAGGAGGAGGCGGCGAGGCTGATCGCGGCCGGCGCGGGGAGGGTGTCGG
GGGCGGCGGCGCCCTTGATGAGGAGAGTGAAGGACCGGCAGACCGTGTTC
GCGAGCGCCACCGTGCCCCAACACAACCACTTCATCCGGCAGTGCGTACA
GGAGGCAGCAGGCGGTCCGGACACCAGGACCACAGGAACAGCAACAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCTGGAGTGGGCACGCCTTCAGGA
GAAAGCGAAGCACCCCGTCCAGCAACAGAGGTCTTGGCAGTAGCAGCAAC
ACCAACAACAAACGCCGTAGACTGTGCGTCCGAGGGCGCCCACTTCCCCG
CCGCCGGCGGGCCGACGTTCCGCGAGCTTTTCACGGGCCGCCTGCCCGAC
TGGCTGCTGTCGCGACTGGAGCAGCTGGGCTTCTCCTCGCCGACCCTCGT
GCAGCGACAAGCACTGGACGTCATCATGGGCGAGGCCAGGAGCGACGCGG
TGCTGCACGCGCAAACTGGAAGCGGCAAGACCCTAGCCTTCTTGCTGCCC
TTCTTCTCCCTGGTGGAGCCGTCCCGCGCGGCGGTGCAGTGCCTCGTGGT
CGTCCCCACCCGAGAGCTGGGCCTGCAGGTAGCAGGAGTCGCGAAGCGCC
TTGCGGCGGCTACGGGAAAGGCCACGGGAGGCAAGGTACAGGTCATGTCC
GTCCTAGAAGGGTCCAGCAATAAGCGGCAGCGGGCCTGGGCGTGGGCGGA
TCCCCCGCACATCGTCATAGGGAATCCGGAAAATCTCTCGAAGCTTGTCG
CTACCGGCGCGATCCGTGTCAACGCCGTTTCCTACGTCGTCGTCGACGAG
GTGGACGCGTGTCTGCTCTCCGAGGCCACCCGTTCCTGGCTGCACGAGCT
TCTCGCCCGAAGCTTGTCCCCGACGCACTCGGACGAGGACGAGAAGGAGG
ACGAGGAGGAGGCGGCGAGGCTGATCGCGGCCGGCGCGGGGAGGGTGTCG
GGGGCGGCGGCGCCCTTGATGAGGAGAGTGAAGGACCGGCAGACCGTGTT
CGCGAGCGCCACCGTGCCCCAACACAACCACTTCATCCGGCAGTGCGTAC
AGAAACAGTGGACGCTGACGGAGCCGGTGCACGTGCAAGTGCACGCAAAG
GAGGCCATGCCCTCGTGCCTCACCCACTTCTACGTCGTGTGCCCCCCGGA
GCAAAAGCTGCCCGTCCTCCGAGCTTTGATCAAGCGCGAGCTGGGATCTA
CAGTTGGGGCTAAATTTAGCGGCGGCGACCCTAGGTCGGACCCGAAGGCG
ATCTCGAAGGCGGACACGAGAGGCCTCGTTTTTGCGCTGCCCACAAAGTC
TCTGGATGATATTGCGTCGTCCCTGGATAAGGCGTTGGGTGGGGGCGCGC
GAGGGGGCGGAGGGGGGGAGGAGGGGGGCCCCGAGCCGCCGCCTCTGGCT
GAGTTTCTTGCGGAGGAGCTGGGCTTGAACGCACGGAAACAGTGGACGCT
GACGGAGCCGGTGCACGTGCAAGTGCACGCAAAGGAGGCCATGCCCTCGT
GCCTCACCCACTTCTACGTCGTGTGCCCCCCGGAGCAAAAGCTGCCCGTC
CTCCGAGCTTTGATCAAGCGCGAGCTGGGATCTACAGTTGGGGCTAAATT
TAGCGGCGGCGACCCTAGGTCGGACCCGAAGGCGATCTCGAAGGCGGACA
CGAGAGGCCTCGTTTTTGCGCTGCCCACAAAGTCTCTGGATGATATTGCG
TCGTCCCTGGATAAGGCGTTGGGTGGGGGCGCGCGAGGGGGCGGAGGGGG
GGAGGAGGGGGGCCCCGAGCCGCCGCCTCTGGCTGAGTTTCTTGCGGAGG
AGCTGGGCTTGAACGCACGG
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