mRNA_M-pyrifera_M_contig11793.3705.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11793.3705.1
Unique NamemRNA_M-pyrifera_M_contig11793.3705.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: D7G8D7_ECTSI (ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D7_ECTSI)

HSP 1 Score: 363 bits (933), Expect = 4.010e-127
Identity = 181/184 (98.37%), Postives = 184/184 (100.00%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGDA 552
            MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERM+IAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIR+RQWSIQEASALKGKGLFEGFDWLVTCIKGG+A
Sbjct:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMAIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRNRQWSIQEASALKGKGLFEGFDWLVTCIKGGEA 184
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: A0A836CD21_9STRA (ARL1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD21_9STRA)

HSP 1 Score: 336 bits (861), Expect = 3.820e-116
Identity = 163/184 (88.59%), Postives = 179/184 (97.28%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGDA 552
            MGI+LS+VFQA+FGSKEVRILILGLDNAGKTTIL RLQNEA+++IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ IAKQEL AMLEEEELKDAILLVFANKQDQPGSL +T+VSEALGLP++RSRQW+IQEASA+KGKGLFEGFDWLVTCIKGG+A
Sbjct:    1 MGILLSKVFQAVFGSKEVRILILGLDNAGKTTILLRLQNEAEEDIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADTERLGIAKQELAAMLEEEELKDAILLVFANKQDQPGSLKATQVSEALGLPELRSRQWTIQEASAVKGKGLFEGFDWLVTCIKGGNA 184
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: A0A1E7FFD0_9STRA (Arl1-family small GTPase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFD0_9STRA)

HSP 1 Score: 320 bits (821), Expect = 4.770e-110
Identity = 153/183 (83.61%), Postives = 171/183 (93.44%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGD 549
            MGI+ S+VF+ LFGSKEVRILILGLDNAGKTTILYRLQNE+D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERM +AK EL AMLEE+ELKD+ILLVFANKQDQ G++ + ++S+ALGLPDIR+RQWSIQE SALKGKGLFEGFDWLVTCIKG D
Sbjct:    1 MGILFSKVFETLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERMPVAKGELAAMLEEDELKDSILLVFANKQDQKGAMNAQQISDALGLPDIRNRQWSIQETSALKGKGLFEGFDWLVTCIKGTD 183
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: A0A7S2DEW5_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2DEW5_9STRA)

HSP 1 Score: 320 bits (820), Expect = 6.780e-110
Identity = 154/184 (83.70%), Postives = 170/184 (92.39%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGDA 552
            MGI+ SRVFQ++FGSKEVRILILGLDNAGKTTILY+LQNE D+ I TIPTIGFNVETL+YKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+DRER+++A+QEL AMLEEEELKD+ILLVFANKQDQ G+L +  VSEAL LPDIR+RQWSIQE  ALKGKGLFEGFDWLV CIKGGD 
Sbjct:    1 MGIIFSRVFQSIFGSKEVRILILGLDNAGKTTILYKLQNETDEEINTIPTIGFNVETLKYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADRERLNVAQQELQAMLEEEELKDSILLVFANKQDQSGALGAQGVSEALRLPDIRNRQWSIQETCALKGKGLFEGFDWLVMCIKGGDV 184
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: B8CE86_THAPS (Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8CE86_THAPS)

HSP 1 Score: 317 bits (812), Expect = 1.160e-108
Identity = 151/181 (83.43%), Postives = 172/181 (95.03%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 543
            MGI++SRVF++LFGSKEVRILILGLDNAGKTTILYRLQNE+D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDS+D ERMS+AK EL AMLEEEEL+++ILLVFANKQDQ G+L + ++S+ALGLP++R+RQWSIQE SAL+GKGLFEGFDWLV CIKG
Sbjct:    1 MGIIMSRVFESLFGSKEVRILILGLDNAGKTTILYRLQNESDEAVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSADVERMSVAKGELAAMLEEEELQNSILLVFANKQDQKGALNAQQISDALGLPEVRNRQWSIQETSALQGKGLFEGFDWLVACIKG 181
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: F0YGB1_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGB1_AURAN)

HSP 1 Score: 314 bits (805), Expect = 1.270e-107
Identity = 154/182 (84.62%), Postives = 168/182 (92.31%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDN-IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 543
            MGI+ SRVFQALFGSKEVRILILGLDNAGKTTILY+LQNE DD  I TIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLEEEELKDAILLV ANKQDQ G+L + +VSEALGLPD+R+RQWSIQE  A KGKGL EGFDWLVTCIKG
Sbjct:    1 MGILFSRVFQALFGSKEVRILILGLDNAGKTTILYKLQNETDDEEIMTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLAVARQELQAMLEEEELKDAILLVLANKQDQRGALGAKDVSEALGLPDVRNRQWSIQETCATKGKGLSEGFDWLVTCIKG 182
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: A0A6U1B3M7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B3M7_9STRA)

HSP 1 Score: 314 bits (805), Expect = 3.850e-107
Identity = 150/184 (81.52%), Postives = 170/184 (92.39%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGDA 552
            MGI  SR+FQ +FGSKEVRILILGLDNAGKTTILYRLQNE+D++IQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D+ER+++A+QEL AMLEEEELKDAILL+FANKQDQ G+L + ++SEAL L +IR+RQWSIQE  ALKG GLFEGFDWLV CI GG+A
Sbjct:   32 MGIFFSRIFQRIFGSKEVRILILGLDNAGKTTILYRLQNESDEDIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADKERLNVAQQELQAMLEEEELKDAILLLFANKQDQKGALGAQDISEALKLTEIRNRQWSIQETCALKGNGLFEGFDWLVMCISGGEA 215
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: A0A7S3DQ25_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQ25_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.210e-106
Identity = 149/181 (82.32%), Postives = 171/181 (94.48%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 543
            MGI++SR+F++LFGSKEVRILILGLDNAGKTTILYRLQNE D+ +QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ERMS+A+ EL AMLEEE+LKD+ILLVFANKQDQ G+L + ++S+ALGLP++R+RQWSIQE SALKGKG+FEGFDWLVT IKG
Sbjct:   54 MGILMSRLFESLFGSKEVRILILGLDNAGKTTILYRLQNEGDEVVQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADIERMSVARGELTAMLEEEDLKDSILLVFANKQDQKGALNAEQISDALGLPEVRNRQWSIQETSALKGKGMFEGFDWLVTSIKG 234
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BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: A0A6S9DTD2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DTD2_HETAK)

HSP 1 Score: 308 bits (789), Expect = 3.470e-105
Identity = 146/181 (80.66%), Postives = 168/181 (92.82%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKG 543
            MGI  S++F +LFGSKEVRILILGLDNAGKTTILYRLQN++D+ IQT+PTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER+ +A+QEL AMLEEE+L+DAILLVFANKQDQ G+L + ++SE+LGL +IR+RQWSIQE SALKG GL+EGFDWLVTCIKG
Sbjct:    1 MGIFFSQLFNSLFGSKEVRILILGLDNAGKTTILYRLQNDSDEVIQTVPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADAERVHVARQELSAMLEEEDLRDAILLVFANKQDQRGALNAAQISESLGLSEIRNRQWSIQETSALKGNGLYEGFDWLVTCIKG 181
[Close]
BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Match: A0A7S3PDY2_9STRA (Hypothetical protein n=3 Tax=Labyrinthulomycetes TaxID=35131 RepID=A0A7S3PDY2_9STRA)

HSP 1 Score: 298 bits (762), Expect = 4.520e-101
Identity = 149/185 (80.54%), Postives = 165/185 (89.19%), Query Frame = 1 
Query:    1 MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNI-QTIPTIGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRERMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDIRSRQWSIQEASALKGKGLFEGFDWLVTCIKGGDA 552
            MGI  SR+F ALFGSKEVRILILGLDNAGKTTILYRLQ   D+ I QT+PTIGFNVETLQY+NIKFQVWDLGGQTSIRPYWRCYYPNTDAI+FVVDS+D ER++IAKQELMAMLEEEELKD+ILLVFANKQD  G+L + +VSE LGL  I++RQWSIQE SA KG+GLFEGFDWLVTCIK G +
Sbjct:    1 MGIFFSRLFSALFGSKEVRILILGLDNAGKTTILYRLQ--VDEPIGQTVPTIGFNVETLQYQNIKFQVWDLGGQTSIRPYWRCYYPNTDAIIFVVDSADVERLNIAKQELMAMLEEEELKDSILLVFANKQDMKGALNAAQVSEHLGLATIKNRQWSIQETSATKGRGLFEGFDWLVTCIKSGQS 183
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11793.3705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8D7_ECTSI4.010e-12798.37ARL1, ARF-like Ras superfamily GTPase n=2 Tax=Ecto... [more]
A0A836CD21_9STRA3.820e-11688.59ARL1, ARF-like ras superfamily GTPase n=1 Tax=Trib... [more]
A0A1E7FFD0_9STRA4.770e-11083.61Arl1-family small GTPase n=1 Tax=Fragilariopsis cy... [more]
A0A7S2DEW5_9STRA6.780e-11083.70Hypothetical protein n=2 Tax=Dictyochophyceae TaxI... [more]
B8CE86_THAPS1.160e-10883.43Adp-ribosylation factor 1 n=15 Tax=Bacillariophyta... [more]
F0YGB1_AURAN1.270e-10784.62Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A6U1B3M7_9STRA3.850e-10781.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3DQ25_9STRA1.210e-10682.32Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A6S9DTD2_HETAK3.470e-10580.66Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3PDY2_9STRA4.520e-10180.54Hypothetical protein n=3 Tax=Labyrinthulomycetes T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11793contigM-pyrifera_M_contig11793:138..3532 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score363.6
Seed ortholog evalue5.4e-98
Seed eggNOG ortholog2880.D7G8D7
Preferred nameARL1
KEGG koko:K07942,ko:K07977
Hectar predicted targeting categoryother localisation
GOsGO:0000045,GO:0000139,GO:0000166,GO:0001505,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0005829,GO:0006403,GO:0006605,GO:0006623,GO:0006810,GO:0006836,GO:0006886,GO:0006892,GO:0006893,GO:0006897,GO:0006914,GO:0006950,GO:0006996,GO:0007029,GO:0007030,GO:0007033,GO:0007034,GO:0007154,GO:0007267,GO:0007268,GO:0007269,GO:0007275,GO:0007431,GO:0007444,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009888,GO:0009987,GO:0010256,GO:0010517,GO:0010518,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016462,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019748,GO:0019904,GO:0022607,GO:0023052,GO:0023061,GO:0030234,GO:0030334,GO:0031090,GO:0031503,GO:0031584,GO:0031984,GO:0032258,GO:0032386,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032588,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0033157,GO:0033227,GO:0033363,GO:0033365,GO:0033554,GO:0034067,GO:0034497,GO:0034613,GO:0034629,GO:0034976,GO:0035220,GO:0035272,GO:0035295,GO:0035639,GO:0036094,GO:0036465,GO:0040012,GO:0042147,GO:0042886,GO:0043001,GO:0043085,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044093,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048488,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051049,GO:0051179,GO:0051223,GO:0051234,GO:0051236,GO:0051270,GO:0051336,GO:0051345,GO:0051641,GO:0051649,GO:0051716,GO:0060191,GO:0060193,GO:0060341,GO:0060429,GO:0060627,GO:0060628,GO:0061024,GO:0061919,GO:0061951,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070727,GO:0070861,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0072594,GO:0072657,GO:0072659,GO:0072665,GO:0072666,GO:0090087,GO:0090150,GO:0090158,GO:0097159,GO:0097367,GO:0098588,GO:0098657,GO:0098772,GO:0098791,GO:0098876,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099643,GO:1901265,GO:1901363,GO:1903292,GO:1903827,GO:1905037,GO:1990778,GO:2000145
EggNOG free text desc.GTP binding
EggNOG OGsCOG1100@1,KOG0072@2759
Ec32 ortholog descriptionARL1, ARF-like Ras superfamily GTPase
Ec32 orthologEc-19_004070.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04031,ko04131
Exons5
Model size555
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11793.3705.1prot_M-pyrifera_M_contig11793.3705.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11793 138..3532 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815697.5384288-CDS-M-pyrifera_M_contig11793:137..3351622815697.5384288-CDS-M-pyrifera_M_contig11793:137..335Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 138..335 +
1692277526.9445744-CDS-M-pyrifera_M_contig11793:137..3351692277526.9445744-CDS-M-pyrifera_M_contig11793:137..335Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 138..335 +
1622815697.5526767-CDS-M-pyrifera_M_contig11793:1310..14541622815697.5526767-CDS-M-pyrifera_M_contig11793:1310..1454Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 1311..1454 +
1692277526.9554534-CDS-M-pyrifera_M_contig11793:1310..14541692277526.9554534-CDS-M-pyrifera_M_contig11793:1310..1454Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 1311..1454 +
1622815697.5663364-CDS-M-pyrifera_M_contig11793:1813..18911622815697.5663364-CDS-M-pyrifera_M_contig11793:1813..1891Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 1814..1891 +
1692277526.9662578-CDS-M-pyrifera_M_contig11793:1813..18911692277526.9662578-CDS-M-pyrifera_M_contig11793:1813..1891Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 1814..1891 +
1622815697.5825248-CDS-M-pyrifera_M_contig11793:2452..25531622815697.5825248-CDS-M-pyrifera_M_contig11793:2452..2553Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 2453..2553 +
1692277526.9789295-CDS-M-pyrifera_M_contig11793:2452..25531692277526.9789295-CDS-M-pyrifera_M_contig11793:2452..2553Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 2453..2553 +
1622815697.5948234-CDS-M-pyrifera_M_contig11793:3498..35321622815697.5948234-CDS-M-pyrifera_M_contig11793:3498..3532Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 3499..3532 +
1692277526.998036-CDS-M-pyrifera_M_contig11793:3498..35321692277526.998036-CDS-M-pyrifera_M_contig11793:3498..3532Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11793 3499..3532 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11793.3705.1

>prot_M-pyrifera_M_contig11793.3705.1 ID=prot_M-pyrifera_M_contig11793.3705.1|Name=mRNA_M-pyrifera_M_contig11793.3705.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
MGIVLSRVFQALFGSKEVRILILGLDNAGKTTILYRLQNEADDNIQTIPT
IGFNVETLQYKNIKFQVWDLGGQTSIRPYWRCYYPNTDAIVFVVDSSDRE
RMSIAKQELMAMLEEEELKDAILLVFANKQDQPGSLTSTEVSEALGLPDI
RSRQWSIQEASALKGKGLFEGFDWLVTCIKGGDA*
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mRNA from alignment at M-pyrifera_M_contig11793:138..3532+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11793.3705.1 ID=mRNA_M-pyrifera_M_contig11793.3705.1|Name=mRNA_M-pyrifera_M_contig11793.3705.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3395bp|location=Sequence derived from alignment at M-pyrifera_M_contig11793:138..3532+ (Macrocystis pyrifera P11B4 male)
ATGGGCATTGTTCTGAGCCGAGTTTTCCAGGCCCTGTTCGGATCAAAAGA
GGTTCGCATCCTCATCCTAGGCCTGGATAATGCGGGAAAGACTACCATCC
TGTACCGCTTGCAGAACGAGGCTGACGACAACATCCAGACGATACCTACT
ATCGGTTTCAACGTGGAGACCTTGCAGTACAAAAATATCAAGTTTCAGGT
GGGCGCTGTGTTGTTGTAGCGGAGGGGAGGGGGGGGGCGCGGGGGGGGGT
GGGTGGTTGGTCTGGTTTTGTTTTTTTCTTTGGTTTTTGTTTTGTTTTGG
TCTGGCTTGATTGGTTTTGGTTAGGTTTGGCTTGGTTCTGGTGCGATGCG
GTGTGGTTTGGTTTGATAATTATGCGGTTTGGTATGATTTCGTGCTGTTT
CGTTCTGTTTGATCCGGATTGGTTTGGGTTGGGTTCGGTTGGTTGGCTGG
TTGGCTTGGTTTGAGGTTAGTCGGTATGGTTTAGTTTAGTTCGGTTTGGT
TTGTTGCGGTTGCCGTGGCCGGAGAATCTCGTCCAACCACGATCACGGAG
ACACGCTTCTTGCTGCGCGCGGTAGCAGCGGTTCTGTCATTTTCTCGCGA
TCATGTTTGGGGTTTCTGTGGCGGTGCCTTGTGGGATATACCGGGGGCAT
TCGTTCTTGCAACCAAACTCGCTCTCATACCAGTATGCTTTAATTATTTT
CTTGTGTATTCGCTTCACGGACAGGAACTCGAGCCTACTTCTGCGCTGCC
CCCCTGTTCCGAACGGCGGCCTGAAAAAAACGCTGCTCTTTCCCATGCGG
TATCGCCCTTGCCTTATCGCATCGTACCGCTGCATCCCTTCCGCGCCCCG
TCCCGTCCTATCCCACCCCGTACCATACCGCACCTCACCGGGCCTCATCC
AACGAACGAACGATGGAACGACACGGCCCAATCAAAACGCCGGCGGTGGC
GGCGCGGTCTAATCATACACCGGTGGCGGCCGTGCGGTGCAATTATAATG
AATCCACCGGCGGTGGCGGCGCCATCTAATCGAAATACCGGTGGCGGCGG
CGCGGTCCAATCAAAACACCGACGGCGGCGGTACGGTCCAATGAAAACAC
TTGCGGTGGCGTGGTCCAATCAAATGGCGGTGGCGCCCGCACGGTGCAAT
CAAAACACCGGTGGCGAGAGAAGGTGTGGGATCTGGGCGGACAAACGAGC
ATCCGGCCATACTGGCGGTGCTACTACCCCAACACTGATGCCATCGTCTT
TGTGGTAGACAGCTCGGACCGAGAGCGGATGAGCATCGCGAAACAGGAGC
TCATGGCCATGTTAGAGGTGGGTAGTTGGAGGGGGTTGATGGGCGGGTGG
GTGAGTGGATGGATAGGTAGGTGAGTGTGTGGGTGTGTGGGTGGGGGGGG
GGAGAGTTGCTGCGGCAAGAATTTGAATATCCTCGTGAGCGGGTGTGTGT
GAGAGAGAGGGAGGGAGTGCACGTGTGAGTGTAGACGTCGGAGTCTGTCC
GTGTCCATCTTATGCGCGTGTGGGCGTTCTGTCGCCCGTGTTTGCATACC
TGGTAGGTGCGTGTGTCGTCTCCCCAAAACATAACGAGTCTTACGCCCCC
CGCCTGCCCCCCCCGCAACCCCTGTTGCCACCGCTGCTGCCCCGTACCGA
TGGTGATTGTGATTTGTGATATCCAGGAGGAGGAGTTGAAGGATGCAATA
TTGCTGGTGTTCGCCAACAAGCAGGACCAGCCGGGGTCGCTGACCTCCAC
AGAGGTGCGATGAGATAAATCGCACAACAACGCGGAACCTCCTCACGCCC
GAGGTGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGAGGAGGTCACTATT
GTACGCAGCCTTAACCCTTTTCGAGCGGACTTTTTTTTTGTTCCAAGGTT
TATCCTCTGTCTCGTGTTGTGAGCTCAGATCGCGGGGTCGCGTCTGCAAG
GACCTCTTCCCCCTCTCCCGGTACACTACTGAAAAATTTGTGCCACTCTA
ATTTCAAGTAGTTTGTCCCCCCAAACATGAAAAGTGGCGTTGAGTGTTGA
TGCGTTTTGTTAGAGACAATCCGTGACCGCTAGGAGAGCTAGACTAGAGA
GAGAAGCACGGGCTGGAGGGCGACTCGTCGGTGCAGGCGGTTGGTCGGTC
GGTCGTTGCCCCCCCCCCCTCCCTTCCAAAACAACCGTTTGGTTGAACCT
ATTGGTTGAAGTTGGTCCGCCCCGTTTTATTCGACCCTCCCCGCTTCTTC
GCCCCACCTCGCATCGCTGCGCACCGCTTTGCACTTGCGCCGCCGTTTTA
TTGTTATGGGGCCAGGTGTCGGAGGCGCTTGGGCTGCCAGACATCCGCAG
CCGGCAATGGTCGATCCAGGAGGCATCGGCTCTAAAGGGGAAGGGGCTGT
TCGAGGGTTTTGATTGGTGAGTCATACGACTACTATGGCCGTGCATGACA
TGACTCCCGCCCCCCCCCCTCCCGCACAGCTCGCGTTTTTCATGCGAGTC
GCCCTACACCTTACGGCGCTTCGTGCTTGGTGCAAGTAATGTCTGCTTGG
TCGGTGAAAACCCGACGTTCTCCGTCCGGGCATTGTAGGGATGCGAGGGT
CTATGGTCATGCGACTACGGCCATGCATGACATGAATACCCCCCCCCCCC
ACACACACACAGAATTTTTCTTGCTGCCTCTTCCGGCTCGCCCCTCTGGT
GTAGTGATTTAATGCTCCTAACGCGTTTGTCTCTCCGATTTACCGTTTTT
TTTTGTCGCGTATTTAGCACTGGTGTCCGCCTTAGCTTTAGCCCTAGCCT
TGGCGTTGGAGTTAGGTTTGCAGTAGGCTTAGTGGTAGGATTGGTGTTAG
CGTTAGTGTTGCCGTTGCCGTGATCGTTAGATGCATCGTTAGCGATGGCG
TTAGCGCTAGCGTCAGCGTTAGCGCTGGCGCTAGCATTGGCGTTAGGCCT
AGCGTTAGGGTTGGCCTTAGCGCTGCCGTTCCTGCTGCCGTGACCGTTTG
ATTCAGCCTTTTGCGATAGCCATAGGTGTCGCGCTGCCTTGTTGGGGCGG
TTGCGTGCTTGCGCATGTTTCAGCTTGCACACCGGCAAGACTGTTGCTTT
GACGAGAAAAACAGCACAAGAAAGCGGCTACTGCCGTGTGCACACTGTGT
TCCAGCCTCGCCTTGTGTCGACGCTATCTCTCTCTTTTTTCCTTGCCCAC
ATCTCCCACCAAGTCAGCTCAGCCTGCCTCTCTCGGGTCCCGATCTCTTG
GTTTCCGCACGCCGCTAGTGTCGCATGTTAACCGCCCCCCCCCCATGCAC
CCCTCCCCTACCCACCCCGATCCCCCACGCTGCTCAACCCGTCCTTGCCC
CTCCCGTGCAGGTTGGTAACGTGCATCAAAGGTGGGGATGCTTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11793:138..3532+

>mRNA_M-pyrifera_M_contig11793.3705.1 ID=mRNA_M-pyrifera_M_contig11793.3705.1|Name=mRNA_M-pyrifera_M_contig11793.3705.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig11793:138..3532+ (Macrocystis pyrifera P11B4 male)
ATGGGCATTGTTCTGAGCCGAGTTTTCCAGGCCCTGTTCGGATCAAAAGA
GGTTCGCATCCTCATCCTAGGCCTGGATAATGCGGGAAAGACTACCATCC
TGTACCGCTTGCAGAACGAGGCTGACGACAACATCCAGACGATACCTACT
ATCGGTTTCAACGTGGAGACCTTGCAGTACAAAAATATCAAGTTTCAGAT
GGGCATTGTTCTGAGCCGAGTTTTCCAGGCCCTGTTCGGATCAAAAGAGG
TTCGCATCCTCATCCTAGGCCTGGATAATGCGGGAAAGACTACCATCCTG
TACCGCTTGCAGAACGAGGCTGACGACAACATCCAGACGATACCTACTAT
CGGTTTCAACGTGGAGACCTTGCAGTACAAAAATATCAAGTTTCAGGTGT
GGGATCTGGGCGGACAAACGAGCATCCGGCCATACTGGCGGTGCTACTAC
CCCAACACTGATGCCATCGTCTTTGTGGTAGACAGCTCGGACCGAGAGCG
GATGAGCATCGCGAAACAGGAGCTCATGGCCATGTTAGAGGTGTGGGATC
TGGGCGGACAAACGAGCATCCGGCCATACTGGCGGTGCTACTACCCCAAC
ACTGATGCCATCGTCTTTGTGGTAGACAGCTCGGACCGAGAGCGGATGAG
CATCGCGAAACAGGAGCTCATGGCCATGTTAGAGGAGGAGGAGTTGAAGG
ATGCAATATTGCTGGTGTTCGCCAACAAGCAGGACCAGCCGGGGTCGCTG
ACCTCCACAGAGGAGGAGGAGTTGAAGGATGCAATATTGCTGGTGTTCGC
CAACAAGCAGGACCAGCCGGGGTCGCTGACCTCCACAGAGGTGTCGGAGG
CGCTTGGGCTGCCAGACATCCGCAGCCGGCAATGGTCGATCCAGGAGGCA
TCGGCTCTAAAGGGGAAGGGGCTGTTCGAGGGTTTTGATTGGTGTCGGAG
GCGCTTGGGCTGCCAGACATCCGCAGCCGGCAATGGTCGATCCAGGAGGC
ATCGGCTCTAAAGGGGAAGGGGCTGTTCGAGGGTTTTGATTGGTTGGTAA
CGTGCATCAAAGGTGGGGATGCTTAGGTTGGTAACGTGCATCAAAGGTGG
GGATGCTTAG
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