mRNA_M-pyrifera_M_contig1179.3703.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A6H5JTH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTH4_9PHAE) HSP 1 Score: 273 bits (697), Expect = 2.610e-90 Identity = 123/172 (71.51%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 1 KIKSRTPKASQACPCFSGKPYGECCKPFHDGEKKPQPVEVMRARYAAFACGMPQFIMKSTHPDHEDFAKPNWRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKD-GEWLYRAPDEDYEASVNVVSKRRYNRVERVDKPKGADTR 513
KIK++TP AS CPCFSG PYG+CCKPFHDGEK QPV+VMRARYAA+AC MPQFIMK+THPDHEDF KP WR ILVFCNNY+FTGLEVG EED D+ +K +VYF AMMAGA GGAVSFDERS+F+L D GEWLYRAPD +Y+ SVNV+SKR+YN + D+P G R
Sbjct: 86 KIKTKTPAASAPCPCFSGNPYGDCCKPFHDGEKSAQPVQVMRARYAAYACNMPQFIMKTTHPDHEDFGKPGWRDSILVFCNNYKFTGLEVGQPEEDQDTPDKVYVYFTAMMAGAKVGGAVSFDERSVFVLTDDGEWLYRAPDANYKESVNVISKRKYNAAAKTDRPSGFSAR 257
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: D8LLE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE1_ECTSI) HSP 1 Score: 267 bits (683), Expect = 2.220e-89 Identity = 124/173 (71.68%), Postives = 141/173 (81.50%), Query Frame = 1
Query: 1 KIKS-RTPKASQACPCFSGKPYGECCKPFHDGEKKPQPVEVMRARYAAFACGMPQFIMKSTHPDHEDFAKPNWRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKD-GEWLYRAPDEDYEASVNVVSKRRYNRVERVDKPKGADTR 513
KIK+ +TP AS CPCFSG PYG+CCKPFHDGEK PQPV+VMRARYAA+AC MPQFIMK+THPDHEDFAK WR ILVFCNNY+FTGLEVG E D D+ +K +VYF AMMAGA GGAVSFDERS+FLL D GEWLYRAPD +Y+ SVNV+SKR+YN + D+P G R
Sbjct: 3 KIKTNKTPAASAPCPCFSGNPYGDCCKPFHDGEKSPQPVQVMRARYAAYACNMPQFIMKTTHPDHEDFAKSGWRDSILVFCNNYKFTGLEVGQPEVDQDTPDKVYVYFTAMMAGAKGGGAVSFDERSVFLLTDDGEWLYRAPDANYKESVNVISKRKYNAAAKTDRPSGFSAR 175
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A835ZDT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT4_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.010e-30 Identity = 69/162 (42.59%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 1 KIKSRTPK-ASQACPCFSGKPYGECCKPFHDGEK-KPQPVEVMRARYAAFACGMPQFIMKSTHPDHEDF--AKPN-----WRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLK-DGEWLYRAPDEDYEASVNVVS 456
K + + PK AS AC C SGK Y +CC+ +HDG + P PV ++R+RY+A+A +P +IM +THPDHED+ AK W++ +L FC+ Y F GL+ GALE + D AF+ F A + + F ERS FL DG WLY + D D+ V + S
Sbjct: 14 KPRDKVPKDASTACVCGSGKAYQDCCRHYHDGTRFAPDPVALLRSRYSAYAYRLPDYIMATTHPDHEDYKPAKDKAGAKAWQQSLLNFCDAYTFQGLQPGALELE-DDGAVAFLNFTAKVNALS--QRLQFVERSKFLCGGDGRWLYVSGDADFTPEVLLES 172
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A1G3SMD1_9PROT (Zinc chelation protein SecC n=2 Tax=Sulfuricurvum TaxID=286130 RepID=A0A1G3SMD1_9PROT) HSP 1 Score: 112 bits (279), Expect = 1.300e-28 Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 37 CPCFSGKPYGECCKPFHDGEKKPQPVEVMRARYAAFACGMPQFIMKSTHPDHEDFAKPN--WRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKDGEWLYRA 417
CPC SGK Y +CC+P+H G ++MR+RY+AFA G+ ++IM +THP++ D+ + WRK IL F RF GL++G E D E+AFV F+A++ G S E+S FL +G+WLY +
Sbjct: 9 CPCHSGKKYKQCCQPYHRGILPSTAEKLMRSRYSAFALGLAEYIMATTHPNNSDYTEETERWRKSILNFSQTTRFLGLKIG---EFSDGKEEAFVRFEAILDGG------SLCEKSRFLNVEGKWLYES 128
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A6M1Z103_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1Z103_9BACT) HSP 1 Score: 108 bits (270), Expect = 2.960e-27 Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 37 CPCFSGKPYGECCKPFHDGEKKPQPVE-VMRARYAAFACGMPQFIMKSTHPDHEDFAKPN--WRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKDGEWLYRA 417
CPC SGK Y CC P H E+ P+ E +MR+RY+A+A +P++IM +THP++ + + W+ EIL FC FTGL++ + E D +AFV F A + + VSF E+S FL +DG WLYR+
Sbjct: 3 CPCHSGKSYQACCVPLHRKERLPESAEQLMRSRYSAYALQLPEYIMDTTHPENPTYLEDRSPWQIEILKFCKETTFTGLDILSTENRDD---EAFVTFFAHLIQNNLD--VSFQEKSRFLKEDGRWLYRS 127
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A7W1JMS8_9BACT (Uncharacterized protein n=1 Tax=Parachlamydiaceae bacterium TaxID=2052176 RepID=A0A7W1JMS8_9BACT) HSP 1 Score: 106 bits (264), Expect = 2.250e-26 Identity = 59/135 (43.70%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 16 TPKASQACPCFSGKPYGECCKPFHDGEKKPQ-PVEVMRARYAAFACGMPQFIMKSTHPDHEDFAKPNWRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKDGEWLYRA 417
+PKA CPC SGK Y ECCKPFHDG K+P+ + +MR+RYAA++ +P +I+ +THPD+ ++EIL FC N F L++ E D+ A+V F A++ G SF E+S F DG WLY A
Sbjct: 2 SPKA--LCPCHSGKSYIECCKPFHDGIKRPENALLLMRSRYAAYSSQLPDYIISTTHPDNVSSLIN--KQEILRFCKNTEFINLKIIDFSEHDDT---AYVTFHAVLK--QNGSDASFTEKSSFKKVDGAWLYHA 127
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A7V4V0Y6_9PROT (Zinc chelation protein SecC n=1 Tax=Campylobacterales bacterium TaxID=2268180 RepID=A0A7V4V0Y6_9PROT) HSP 1 Score: 105 bits (261), Expect = 6.010e-26 Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 37 CPCFSGKPYGECCKPFHDGEKKPQPVEVMRARYAAFACGMPQFIMKSTHPDHEDFA--KPNWRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKDGEWLY 411
CPC SG Y +CCKP+H G K P + +M++RY+A+ G +I+K+TH D+ DF K W+ EI+ FC N F GL++ + D ++AFV FKA ++ + E+S FL DG WLY
Sbjct: 5 CPCGSGVKYKKCCKPYHSGAKAPNALVLMKSRYSAYVVGDSNYIIKTTHKDNYDFRNDKKIWKSEIIGFCQNTDFYGLDI---LDFIDGADEAFVIFKASLSSGN------MIEKSRFLRVDGSWLY 122
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A091AM67_9PROT (Zinc chelation protein SecC n=1 Tax=Sulfuricurvum sp. MLSB TaxID=1537917 RepID=A0A091AM67_9PROT) HSP 1 Score: 104 bits (260), Expect = 9.790e-26 Identity = 52/133 (39.10%), Postives = 79/133 (59.40%), Query Frame = 1
Query: 25 ASQACPCFSGKPYGECCKPFHDGEKKPQPVEVMRARYAAFACGMPQFIMKSTHPDHEDFA--KPNWRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKDGEWLYRA 417
A+ CPC SGK Y +CC+P+H G V +MR RY+A+A G+ +I+K+THP++ DF + +W+K IL F + F GL++ E D +AFV F+A + G + E+S FL ++G WLY +
Sbjct: 5 ANSPCPCHSGKKYKQCCQPYHKGTVPATAVLLMRTRYSAYALGLADYIIKTTHPNNPDFTEDRADWKKNILHFSQDTVFEGLKI---IEFIDGENEAFVTFEAAL------GNYAMKEKSRFLKENGRWLYES 128
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A356KFN4_9BACT (Zinc chelation protein SecC n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KFN4_9BACT) HSP 1 Score: 104 bits (259), Expect = 1.550e-25 Identity = 51/135 (37.78%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 19 PKASQACPCFSGKPYGECCKPFHDGEKKPQPVEVMRARYAAFACGMPQFIMKSTHPDHEDFA--KPNWRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKDGEWLYRA 417
P + ACPC SG Y CC+PFH G P+ +MR+RYAA+A G+ +++ +THP+ ++ + W + F + F GLE+ + E +AFV F+A ++ G SF ERS FL +DG WLY +
Sbjct: 4 PSPNAACPCHSGAKYKRCCRPFHQGSAPPRAEALMRSRYAAYALGLVDYVLATTHPEGPNWEDDRAEWAAGVAAFSQSTSFDGLEILSSGE---GEGEAFVTFRASLSKE--GEDASFSERSRFLREDGRWLYHS 133
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Match: A0A2H0VN27_9BACT (Uncharacterized protein n=1 Tax=Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9 TaxID=1973935 RepID=A0A2H0VN27_9BACT) HSP 1 Score: 102 bits (255), Expect = 7.110e-25 Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 37 CPCFSGKPYGECCKPFHDGEKKPQPVEVMRARYAAFACGMPQFIMKSTHPD--HEDFAKPNWRKEILVFCNNYRFTGLEVGALEEDPDSNEKAFVYFKAMMAGADCGGAVSFDERSIFLLKDGEWLYR 414
CPC SG Y +CC+PFH G+ P P ++RARYAA+A +P FI+ +THP+ + + K W+K++ F + F L + ED E F+ F A + D +F ERS F+ ++G+WLYR
Sbjct: 3 CPCHSGNDYKDCCEPFHKGKLPPTPTILLRARYAAYALNLPDFIIDTTHPECFYYEKDKDKWKKDLEEFSTSTIFKDLRILDTHED---EELGFITFVAFIKQGD--EDATFTERSYFVREEGKWLYR 125 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1179.3703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1179.3703.1 >prot_M-pyrifera_M_contig1179.3703.1 ID=prot_M-pyrifera_M_contig1179.3703.1|Name=mRNA_M-pyrifera_M_contig1179.3703.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp KIKSRTPKASQACPCFSGKPYGECCKPFHDGEKKPQPVEVMRARYAAFACback to top mRNA from alignment at M-pyrifera_M_contig1179:25833..28547+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1179.3703.1 ID=mRNA_M-pyrifera_M_contig1179.3703.1|Name=mRNA_M-pyrifera_M_contig1179.3703.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2715bp|location=Sequence derived from alignment at M-pyrifera_M_contig1179:25833..28547+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1179:25833..28547+ >mRNA_M-pyrifera_M_contig1179.3703.1 ID=mRNA_M-pyrifera_M_contig1179.3703.1|Name=mRNA_M-pyrifera_M_contig1179.3703.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig1179:25833..28547+ (Macrocystis pyrifera P11B4 male)back to top |