mRNA_M-pyrifera_M_contig11789.3700.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig11789.3700.1
Unique NamemRNA_M-pyrifera_M_contig11789.3700.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 8.630e-138
Identity = 197/265 (74.34%), Postives = 228/265 (86.04%), Query Frame = 1
Query:    1 MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAVKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLK 795
            M+EEI KAPLPIIHYG+DLWTC  SGR+++ VH F+VDS+F+LRH L++VKHYAPS   Q   KAS ILF IF+A LAE+GIKL DLAGGTTD+G DV+AMCVN LL L+KI WDWC CHLADK+AE+ FGTSADPQ+SKNK AR V++LVIK AAK+NQST  KQKFE+  L ML+E+LKI+KHAPQRWLSLV VMERIIRLWHVLR VYA+ GEEFPLD+ NN+DDILQLYSLLQPL+AITRDGQYG  PMTAE+H+AFA LK
Sbjct:  209 MQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLADKSAENTFGTSADPQQSKNKIARDVIKLVIKTAAKINQSTIVKQKFEKVTLEMLDEILKITKHAPQRWLSLVLVMERIIRLWHVLRKVYANDGEEFPLDKGNNRDDILQLYSLLQPLSAITRDGQYGNAPMTAEMHLAFAQLK 473          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE)

HSP 1 Score: 407 bits (1045), Expect = 2.430e-134
Identity = 204/276 (73.91%), Postives = 231/276 (83.70%), Query Frame = 1
Query:    1 MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAVKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTNVLDPEKPLR 828
            M  EIE+APLPI+HYGIDLW C  +G ++IDVH  +V+S+  L+H LLAVKHYAPSAA Q   KAS ILF +F +VL EFG+K+ DLAGGTTD+G DV+AMCVNFLLA +K  WDWC CHLAD+AAE AFGTSADPQK KNK+AR VVQLVIKAAAKVNQS  FKQKF+E QL M  EVLKI KHAPQRWLSLVRVMERIIRLWHVLR VYA+ G EFPLD+ +NKD+ILQLYSLL+PLAAITRDGQYGAVPM+AE+HMAFA LK   LDP  PL+
Sbjct:  228 MLTEIERAPLPIVHYGIDLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLADRAAEQAFGTSADPQKPKNKDARGVVQLVIKAAAKVNQSPIFKQKFDEAQLQMTGEVLKIRKHAPQRWLSLVRVMERIIRLWHVLRKVYANDGVEFPLDKGDNKDNILQLYSLLRPLAAITRDGQYGAVPMSAEMHMAFAELKQEGLDPTGPLK 503          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.520e-98
Identity = 156/227 (68.72%), Postives = 182/227 (80.18%), Query Frame = 1
Query:  148 VKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTNVLDPEKPLR 828
            VKHYAPSAA Q + KASG+LF +F+++LAEFGIKL DLAGGTTD+G D++AMC NFLLA + + WDWC CHLAD+AAE AFGTSADPQKSKNK+AR+VV L+IKAAAKVNQS  FKQKF+E Q+ ML E LKIS+HAPQRWLSLVRV+ERIIRLWHVLR                      +L+SLLQPLA ITRDGQYGAVPMTAE+HMAFA LK  +LDP++PL+
Sbjct:   82 VKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLADRAAEAAFGTSADPQKSKNKDARQVVSLIIKAAAKVNQSPIFKQKFDEAQMEMLGETLKISRHAPQRWLSLVRVIERIIRLWHVLR----------------------KLFSLLQPLAVITRDGQYGAVPMTAEMHMAFAELKKELLDPDEPLK 286          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 9.640e-98
Identity = 151/276 (54.71%), Postives = 198/276 (71.74%), Query Frame = 1
Query:    1 MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAVKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTNVLDPEKPLR 828
            M +E+E+APLPI+H+ ID+WT   SGR+F+ +H F+VD++F L+  LL++K YAP   +    +AS +LF I K+VL EFG+K   LA GTTD+G DV+A+  N L  +Y + W WC CHL  KAAE A+G   DP KSKN +AR +++ V+K    +N+S  FK KFE+ Q+ ML E+ K+ KHAPQRWLSL R +ER IRLWHVLR +Y+D G  FPL+E + KD ILQLYSLLQPL++ITRDGQYG  PM A+I M F  L T+VLDP K L+
Sbjct:  245 MVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCHLMVKAAEQAYGIHLDPAKSKNPQARDILKKVVKVVENLNKSPNFKAKFEDLQVDMLGEIFKMVKHAPQRWLSLTRTVERTIRLWHVLRKLYSDEGRNFPLEEGDTKDAILQLYSLLQPLSSITRDGQYGDAPMMADIFMKFGMLNTDVLDPSKDLK 520          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 1.100e-89
Identity = 144/276 (52.17%), Postives = 193/276 (69.93%), Query Frame = 1
Query:    1 MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAVKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTNVLDPEKPLR 828
            M EE+  APLPI+H+ ID+W    SGR+F+ VH F+V ++F L+ TLL++K Y PS  A    KA+ +L  I +A+L EFG +  DLA GTTD+G DV+++ VN L   Y + W+WC CHL  KAAE AFGT  DPQKSKN EA  +++ +I     +++S     KFE+ Q+ +L EVLKI   APQRWL+LVR MER+IRLWHVLR +Y+DAG+ F L+E +NKD I QLYSLLQ L+++TRDGQYG +PM A+I++ F  LK  VL+    L+
Sbjct:    1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMIKAAEDAFGTHPDPQKSKNPEAHNMLKNLIGIVGTLHKSLNLTAKFEDLQVDLLGEVLKIPNQAPQRWLTLVRTMERVIRLWHVLRKLYSDAGKNFILEEGDNKDCIPQLYSLLQSLSSVTRDGQYGGLPMLADIYIKFGMLKMGVLNSSADLK 276          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 5.660e-88
Identity = 138/265 (52.08%), Postives = 186/265 (70.19%), Query Frame = 1
Query:    1 MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAVKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLK 795
            M  E+  APLPI+H+ ID+WT   SGR+F+ VH F+V ++F L+  L++ K             A+ +L  I ++VL EFG++  DLA GTTD+G DV+++ VN L   Y + W+WC CHL  KAAE AFGT  DPQKSKN E RK+++ VI     +++S     KFE+ Q+ +L E+LKI   APQRWL+LVR +ER+IRLWHVLR +++DAG+ FPL+E +NKD ILQLYSLLQPL+++TRDGQYG VPM A+I+M F  LK
Sbjct:  171 MLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALISAK-------------AAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCHLMVKAAEDAFGTHPDPQKSKNPEGRKMLKNVIGMVGTLHKSPNLTAKFEDVQVDLLGEILKIPNQAPQRWLTLVRTLERVIRLWHVLRKLHSDAGKTFPLEEGDNKDCILQLYSLLQPLSSVTRDGQYGGVPMMADIYMKFGMLK 422          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 1.070e-84
Identity = 140/276 (50.72%), Postives = 189/276 (68.48%), Query Frame = 1
Query:    1 MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAVKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTNVLDPEKPLR 828
            M EE+  APLPI+H+ ID+W    SGR+F+ VH F+V ++F L+ TLL+         A    KA+ +L  I +A+L EFG++  DLA GTTD+G DV+++ VN L   Y + W+WC CHL  KAAE AFGT  DPQ SKN EAR +++ +I     +++S     KFE+ Q+ +L EVL I   APQRWL+LVR MER+IRLW V+R +Y+DAG+ FPL+E +NKD I QLYSLLQPL+++TRDGQYG +PM A+I+M F  LK  VL+    L+
Sbjct:    1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSD--------ALGEVKAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCHLMVKAAEDAFGTRPDPQMSKNPEARNMLKNLIGIIGTLHKSN-LTAKFEDLQVDLLGEVLNIPNQAPQRWLTLVRTMERVIRLWRVMRKLYSDAGKNFPLEEGDNKDCINQLYSLLQPLSSVTRDGQYGGLPMLADIYMKFGMLKMGVLNSSADLK 267          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 6.830e-79
Identity = 131/276 (47.46%), Postives = 178/276 (64.49%), Query Frame = 1
Query:    1 MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAVKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTNVLDPEKPLR 828
            M EE++ APLPI+H+ ID+WT   SGR+ +     W              +   P           G+L  I KA+L EFG++  DLA GT D+G DV+++  N L   + + W+WC CHL  KAAE  FGT  DPQKSKN EAR +++ +I     +++S+ FK KF++ Q+ +L EVLKI   AP+RWL+LVR +ER+IRLWHVLR +Y+D G+ FPL+E +NKD ILQLYSLLQP +++TRDGQYG  PM A+I+M    LK  VLDP + L+
Sbjct:   42 MLEEVKNAPLPILHHMIDIWTDKGSGRKTL-----W--------------ERPRP-----------GVLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKRWLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPPSSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEELK 287          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5KEE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE6_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 1.030e-78
Identity = 125/227 (55.07%), Postives = 163/227 (71.81%), Query Frame = 1
Query:  148 VKHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTNVLDPEKPLR 828
            +K Y+PS  A     AS +L  IFK++L EFG++  DLA GTTD+G DV++  VN L   Y + W+WC CHL  KAAE  FGT  DPQKSKN EAR +++ VI     +N+S+ FK KFE+ Q+ +L +VLKI   APQRWL+ VR +ER+IRLWHVLR +Y+DAG+ FPL+E +NK+ ILQL+SLLQ L+++TRDGQYG  PM A++ M F  LK  VLDP KPL+
Sbjct:   10 IKRYSPSQDALGEAAASEVLLEIFKSILREFGLRPSDLASGTTDSGSDVKSASVNGLYPQYGVLWNWCFCHLMVKAAEDGFGTHVDPQKSKNPEARDMLKNVISMVGTLNRSSNFKAKFEDLQVDLLGDVLKIPNQAPQRWLTQVRTLERVIRLWHVLRKLYSDAGKNFPLEEGDNKNAILQLFSLLQSLSSVTRDGQYGNAPMQADVFMKFGELKMEVLDPSKPLK 236          
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 2.590e-64
Identity = 117/278 (42.09%), Postives = 159/278 (57.19%), Query Frame = 1
Query:    1 MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAV--KHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRAMCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQLVIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERIIRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGAVPMTAEIHMAFAHLKTNVLDPEKPLR 828
            M EE+ KAPLP++H+ ID+WT   SGR+F+ VH ++V + F ++H LL V  K Y+P   A    +AS +L  I K++L E G+   DLA GTTD+G DV+A+ VN L   Y + W+WC+CH+  KAAE AFG   DP KSKN  AR V+++VIK    +N+S+  + KFE+ Q  +L E                                            D+NK+D+LQLYSLL+PL  ITRDGQYG  PM A+I+M    LK  VL+ EK L+
Sbjct:   99 MLEEVRKAPLPVLHHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACHMMVKAAEQAFGVHPDPTKSKNPGARDVIKVVIKVVENLNKSSYLRAKFEDLQTELLGE--------------------------------------------DDNKNDVLQLYSLLEPLCMITRDGQYGGAPMMADIYMKMGILKMGVLNLEKELK 332          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11789.3700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYQ2_9PHAE8.630e-13874.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1G0_9PHAE2.430e-13473.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ46_9PHAE1.520e-9868.72Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJJ9_9PHAE9.640e-9854.71Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JB08_9PHAE1.100e-8952.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KS21_9PHAE5.660e-8852.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JZ66_9PHAE1.070e-8450.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8D8_9PHAE6.830e-7947.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEE6_9PHAE1.030e-7855.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZ81_9PHAE2.590e-6442.09Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11789contigM-pyrifera_M_contig11789:8038..9209 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score130.2
Seed ortholog evalue1.5e-27
Seed eggNOG ortholog2880.D7G4Z8
Hectar predicted targeting categoryother localisation
EggNOG OGs2CZK4@1,2SARG@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size828
Cds size828
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815696.9492953-CDS-M-pyrifera_M_contig11789:8037..87181622815696.9492953-CDS-M-pyrifera_M_contig11789:8037..8718Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11789 8038..8718 -
1692277526.525841-CDS-M-pyrifera_M_contig11789:8037..87181692277526.525841-CDS-M-pyrifera_M_contig11789:8037..8718Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11789 8038..8718 -
1622815696.9622808-CDS-M-pyrifera_M_contig11789:9062..92091622815696.9622808-CDS-M-pyrifera_M_contig11789:9062..9209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11789 9063..9209 -
1692277526.536026-CDS-M-pyrifera_M_contig11789:9062..92091692277526.536026-CDS-M-pyrifera_M_contig11789:9062..9209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig11789 9063..9209 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11789.3700.1prot_M-pyrifera_M_contig11789.3700.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig11789 8038..9209 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig11789.3700.1

>prot_M-pyrifera_M_contig11789.3700.1 ID=prot_M-pyrifera_M_contig11789.3700.1|Name=mRNA_M-pyrifera_M_contig11789.3700.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=276bp
MREEIEKAPLPIIHYGIDLWTCMRSGRQFIDVHAFWVDSDFNLRHTLLAV
KHYAPSAAAQDATKASGILFIIFKAVLAEFGIKLEDLAGGTTDAGPDVRA
MCVNFLLALYKIRWDWCSCHLADKAAEHAFGTSADPQKSKNKEARKVVQL
VIKAAAKVNQSTTFKQKFEETQLTMLNEVLKISKHAPQRWLSLVRVMERI
IRLWHVLRGVYADAGEEFPLDEDNNKDDILQLYSLLQPLAAITRDGQYGA
VPMTAEIHMAFAHLKTNVLDPEKPLR
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mRNA from alignment at M-pyrifera_M_contig11789:8038..9209-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig11789.3700.1 ID=mRNA_M-pyrifera_M_contig11789.3700.1|Name=mRNA_M-pyrifera_M_contig11789.3700.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1172bp|location=Sequence derived from alignment at M-pyrifera_M_contig11789:8038..9209- (Macrocystis pyrifera P11B4 male)
ATGAGAGAGGAGATCGAGAAGGCACCGCTGCCTATCATCCACTACGGGAT CGACCTGTGGACCTGCATGCGCTCTGGGCGACAATTTATAGATGTGCACG CGTTCTGGGTCGACAGCGACTTCAACTTACGTCACACGCTCCTTGCTGTA AGTCACATAACTTTCGTCCCCTCTGGGGTTGCTCCTCGGCAATGAGCCAA CTTTTGCTTGTTGTTTAGGGGCGGAATTGCGTTGCCCACGTGCCTAATTT TAATTTCACATTTAGGTTCCAGTGTACTCTTTTGTTGTTATTTTCTAATT CAGCAAGATGCTCCCAAGTGTACTCTTGCAAAAAGTGCCCTCTGTATCAG CTTTGTTGTTCTCCCTACTTTGTTTTGATACAGGTTGACTCTCTAGGTTC TCTGTGGATAGTTGAGATTGTACGGTGTAAATTAATTTTCCTACGTGGAC AATGCCGTTCACCCTCCCCTCCCCCCTTATGTGCGGTACAGGTCAAGCAC TACGCCCCTTCGGCTGCCGCGCAGGACGCGACGAAGGCCAGCGGCATCCT CTTCATCATCTTCAAGGCGGTGCTGGCAGAGTTCGGCATCAAGCTGGAGG ACCTCGCTGGTGGAACGACGGACGCTGGCCCCGACGTCAGGGCCATGTGC GTCAACTTCCTCCTGGCGCTGTACAAGATCCGGTGGGACTGGTGTAGCTG CCACCTGGCCGACAAGGCTGCCGAGCATGCCTTCGGCACTTCGGCGGACC CCCAGAAGTCGAAGAACAAGGAGGCGCGCAAGGTTGTGCAGCTCGTGATC AAGGCCGCGGCCAAGGTCAACCAGTCCACCACCTTCAAGCAGAAGTTCGA GGAGACCCAGCTGACGATGTTGAACGAGGTCTTGAAGATCTCAAAGCACG CGCCCCAGCGGTGGCTGAGTCTCGTTCGCGTCATGGAGCGCATCATCCGC CTGTGGCACGTGCTCAGGGGGGTCTACGCCGACGCCGGCGAGGAGTTCCC ACTCGACGAGGACAACAACAAGGACGACATCCTCCAGCTCTACTCGCTGC TCCAGCCTCTTGCCGCCATTACGCGGGATGGGCAGTACGGCGCCGTGCCG ATGACGGCAGAGATTCACATGGCGTTCGCACACCTCAAGACGAACGTGCT CGACCCCGAGAAGCCGCTGCGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig11789:8038..9209-

>mRNA_M-pyrifera_M_contig11789.3700.1 ID=mRNA_M-pyrifera_M_contig11789.3700.1|Name=mRNA_M-pyrifera_M_contig11789.3700.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1656bp|location=Sequence derived from alignment at M-pyrifera_M_contig11789:8038..9209- (Macrocystis pyrifera P11B4 male)
ATGAGAGAGGAGATCGAGAAGGCACCGCTGCCTATCATCCACTACGGGAT
CGACCTGTGGACCTGCATGCGCTCTGGGCGACAATTTATAGATGTGCACG
CGTTCTGGGTCGACAGCGACTTCAACTTACGTCACACGCTCCTTGCTATG
AGAGAGGAGATCGAGAAGGCACCGCTGCCTATCATCCACTACGGGATCGA
CCTGTGGACCTGCATGCGCTCTGGGCGACAATTTATAGATGTGCACGCGT
TCTGGGTCGACAGCGACTTCAACTTACGTCACACGCTCCTTGCTGTCAAG
CACTACGCCCCTTCGGCTGCCGCGCAGGACGCGACGAAGGCCAGCGGCAT
CCTCTTCATCATCTTCAAGGCGGTGCTGGCAGAGTTCGGCATCAAGCTGG
AGGACCTCGCTGGTGGAACGACGGACGCTGGCCCCGACGTCAGGGCCATG
TGCGTCAACTTCCTCCTGGCGCTGTACAAGATCCGGTGGGACTGGTGTAG
CTGCCACCTGGCCGACAAGGCTGCCGAGCATGCCTTCGGCACTTCGGCGG
ACCCCCAGAAGTCGAAGAACAAGGAGGCGCGCAAGGTTGTGCAGCTCGTG
ATCAAGGCCGCGGCCAAGGTCAACCAGTCCACCACCTTCAAGCAGAAGTT
CGAGGAGACCCAGCTGACGATGTTGAACGAGGTCTTGAAGATCTCAAAGC
ACGCGCCCCAGCGGTGGCTGAGTCTCGTTCGCGTCATGGAGCGCATCATC
CGCCTGTGGCACGTGCTCAGGGGGGTCTACGCCGACGCCGGCGAGGAGTT
CCCACTCGACGAGGACAACAACAAGGACGACATCCTCCAGCTCTACTCGC
TGCTCCAGCCTCTTGCCGCCATTACGCGGGATGGGCAGTACGGCGCCGTG
CCGATGACGGCAGAGATTCACATGGCGTTCGCACACCTCAAGACGAACGT
GCTCGACCCCGAGAAGCCGCTGCGAGTCAAGCACTACGCCCCTTCGGCTG
CCGCGCAGGACGCGACGAAGGCCAGCGGCATCCTCTTCATCATCTTCAAG
GCGGTGCTGGCAGAGTTCGGCATCAAGCTGGAGGACCTCGCTGGTGGAAC
GACGGACGCTGGCCCCGACGTCAGGGCCATGTGCGTCAACTTCCTCCTGG
CGCTGTACAAGATCCGGTGGGACTGGTGTAGCTGCCACCTGGCCGACAAG
GCTGCCGAGCATGCCTTCGGCACTTCGGCGGACCCCCAGAAGTCGAAGAA
CAAGGAGGCGCGCAAGGTTGTGCAGCTCGTGATCAAGGCCGCGGCCAAGG
TCAACCAGTCCACCACCTTCAAGCAGAAGTTCGAGGAGACCCAGCTGACG
ATGTTGAACGAGGTCTTGAAGATCTCAAAGCACGCGCCCCAGCGGTGGCT
GAGTCTCGTTCGCGTCATGGAGCGCATCATCCGCCTGTGGCACGTGCTCA
GGGGGGTCTACGCCGACGCCGGCGAGGAGTTCCCACTCGACGAGGACAAC
AACAAGGACGACATCCTCCAGCTCTACTCGCTGCTCCAGCCTCTTGCCGC
CATTACGCGGGATGGGCAGTACGGCGCCGTGCCGATGACGGCAGAGATTC
ACATGGCGTTCGCACACCTCAAGACGAACGTGCTCGACCCCGAGAAGCCG
CTGCGA
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