mRNA_M-pyrifera_M_contig117861.3696.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A812ZPK7_SYMMI (YbjT protein n=11 Tax=cellular organisms TaxID=131567 RepID=A0A812ZPK7_SYMMI) HSP 1 Score: 145 bits (366), Expect = 7.830e-40 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAEGI 210
LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTA+FDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARA EGI
Sbjct: 417 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAMFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARATEGI 486
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A3C0AR86_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AR86_9PLAN) HSP 1 Score: 120 bits (300), Expect = 6.440e-34 Identity = 56/70 (80.00%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAEGI 210
LRL AEMKLPGRAWLEFEV + STI+QTAIFDPVGLWGRLYWYAVCPLH+FVF+GM+ NIA AAE I
Sbjct: 13 LRLLAEMKLPGRAWLEFEVTGTGETSTITQTAIFDPVGLWGRLYWYAVCPLHHFVFSGMIHNIAAAAERI 82
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A517XA46_9PLAN (3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XA46_9PLAN) HSP 1 Score: 120 bits (302), Expect = 1.190e-30 Identity = 56/70 (80.00%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAEGI 210
LRL AEMKLPGRAWLEFEV + STI+QTAIFDPVGLWGRLYWYAVCPLH+FVF+GM+ NIA AAE I
Sbjct: 419 LRLLAEMKLPGRAWLEFEVTGTGETSTITQTAIFDPVGLWGRLYWYAVCPLHHFVFSGMIHNIAAAAEAI 488
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A518IB16_9PLAN (3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IB16_9PLAN) HSP 1 Score: 120 bits (301), Expect = 1.670e-30 Identity = 54/68 (79.41%), Postives = 62/68 (91.18%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAE 204
LRL+AEMKLPGRAWLEFEV D STI+QTAIFDP+GLWGR+YWYAVCPLH+FVF+GMLKNIA A++
Sbjct: 421 LRLSAEMKLPGRAWLEFEVTGDEVSSTITQTAIFDPIGLWGRIYWYAVCPLHHFVFSGMLKNIAVASQ 488
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A517VYX7_9PLAN (3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VYX7_9PLAN) HSP 1 Score: 114 bits (286), Expect = 2.190e-28 Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAA 201
LRL AEMKLPGRAWLEF+V + Q STI+QTAI+DP+GL GRLYWYAVCPLH+FVF+GML+NIA+AA
Sbjct: 420 LRLVAEMKLPGRAWLEFQVTGNDQSSTITQTAIYDPIGLLGRLYWYAVCPLHHFVFSGMLRNIAKAA 486
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A1F2V6U1_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22 TaxID=1797188 RepID=A0A1F2V6U1_9BACT) HSP 1 Score: 103 bits (257), Expect = 1.470e-27 Identity = 47/68 (69.12%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAE 204
LRL AEM LPGRAWL+FE++ D GSTI QTAIFDP+G+ G LYWY+V PLH F+FAGML I +AAE
Sbjct: 7 LRLFAEMNLPGRAWLQFEIEPDGSGSTIRQTAIFDPLGIRGLLYWYSVYPLHQFIFAGMLSGITKAAE 74
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A3L7V2J0_9BACT (SDR family oxidoreductase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7V2J0_9BACT) HSP 1 Score: 110 bits (275), Expect = 7.870e-27 Identity = 53/68 (77.94%), Postives = 57/68 (83.82%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAE 204
LRL AEMKLPGRAWLEFEV QGSTI QTAIFDP+GL G LYWY + PLH FVFAGML+N+ARAAE
Sbjct: 409 LRLKAEMKLPGRAWLEFEVNPCEQGSTIRQTAIFDPLGLAGLLYWYGIYPLHQFVFAGMLRNLARAAE 476
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A7C3DJP7_9BACT (SDR family oxidoreductase n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7C3DJP7_9BACT) HSP 1 Score: 109 bits (273), Expect = 1.320e-26 Identity = 49/69 (71.01%), Postives = 58/69 (84.06%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAEG 207
LRL AEMKLPGRAWL+FEV++D + + ++QTAIFDPVGLWG YWY V PLH VFAGML+ +ARAAEG
Sbjct: 413 LRLQAEMKLPGRAWLDFEVEQDGEHARLNQTAIFDPVGLWGLAYWYGVWPLHQLVFAGMLRGLARAAEG 481
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: UPI00198BF070 (SDR family oxidoreductase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI00198BF070) HSP 1 Score: 106 bits (264), Expect = 1.660e-26 Identity = 48/68 (70.59%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAE 204
LRL AEMKLPGRAWLEFEV+ D G+ + QTA FDP+GLWG YWY V PLH VFAGML+ +ARAAE
Sbjct: 201 LRLTAEMKLPGRAWLEFEVQPDGNGARLRQTATFDPLGLWGLAYWYGVWPLHQLVFAGMLRGLARAAE 268
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Match: A0A3N5RIN8_9PLAN (SDR family oxidoreductase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3N5RIN8_9PLAN) HSP 1 Score: 107 bits (268), Expect = 2.590e-26 Identity = 50/68 (73.53%), Postives = 56/68 (82.35%), Query Frame = 1
Query: 1 LRLAAEMKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFAGMLKNIARAAE 204
LRL AEMKLPGRAWLEFEV GSTI QTAIFDP+GLWG +YWY + PLH FVFAGML+N+A+AA
Sbjct: 286 LRLHAEMKLPGRAWLEFEVTPCDLGSTIRQTAIFDPLGLWGLMYWYGIYPLHQFVFAGMLRNLAQAAS 353 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117861.3696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig117861.3696.1 >prot_M-pyrifera_M_contig117861.3696.1 ID=prot_M-pyrifera_M_contig117861.3696.1|Name=mRNA_M-pyrifera_M_contig117861.3696.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp MKLPGRAWLEFEVKEDAQGSTISQTAIFDPVGLWGRLYWYAVCPLHYFVFback to top mRNA from alignment at M-pyrifera_M_contig117861:153..362+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig117861.3696.1 ID=mRNA_M-pyrifera_M_contig117861.3696.1|Name=mRNA_M-pyrifera_M_contig117861.3696.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=210bp|location=Sequence derived from alignment at M-pyrifera_M_contig117861:153..362+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig117861:153..362+ >mRNA_M-pyrifera_M_contig117861.3696.1 ID=mRNA_M-pyrifera_M_contig117861.3696.1|Name=mRNA_M-pyrifera_M_contig117861.3696.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig117861:153..362+ (Macrocystis pyrifera P11B4 male)back to top |